RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 CCDC61Q9Y6R9 512 aa12.22□□□□□ -0.45
GYPA-204ENST00000504786 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
GYPA-204ENST00000504786 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
GYPA-204ENST00000504786 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
GYPA-204ENST00000504786 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
GYPA-204ENST00000504786 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
GYPA-204ENST00000504786 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
GYPA-204ENST00000504786 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
GYPA-204ENST00000504786 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
GYPA-204ENST00000504786 GSE1Q14687 1217 aa12.1□□□□□ -0.47
GYPA-204ENST00000504786 MAP3K13O43283 966 aa12.08□□□□□ -0.48
GYPA-204ENST00000504786 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
GYPA-204ENST00000504786 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
GYPA-204ENST00000504786 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
GYPA-204ENST00000504786 PYGBP11216 843 aa12.02□□□□□ -0.49
GYPA-204ENST00000504786 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
GYPA-204ENST00000504786 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
GYPA-204ENST00000504786 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
GYPA-204ENST00000504786 TIE1P35590 1138 aa11.93□□□□□ -0.5
GYPA-204ENST00000504786 ASTLQ6HA08 431 aaPredicted RBP11.93□□□□□ -0.5
GYPA-204ENST00000504786 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
GYPA-204ENST00000504786 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
GYPA-204ENST00000504786 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
GYPA-204ENST00000504786 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
GYPA-204ENST00000504786 ZNF467Q7Z7K2 595 aaPredicted RBP11.88□□□□□ -0.51
GYPA-204ENST00000504786 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
GYPA-204ENST00000504786 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
GYPA-204ENST00000504786 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
GYPA-204ENST00000504786 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
GYPA-204ENST00000504786 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
GYPA-204ENST00000504786 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
GYPA-204ENST00000504786 C7P10643 843 aa11.81□□□□□ -0.52
GYPA-204ENST00000504786 LHX8Q68G74 356 aa11.81□□□□□ -0.52
GYPA-204ENST00000504786 METRNQ9UJH8 293 aa11.79□□□□□ -0.52
GYPA-204ENST00000504786 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
GYPA-204ENST00000504786 PSEN1P49768 467 aa11.75□□□□□ -0.53
GYPA-204ENST00000504786 PDAP1Q13442 181 aaKnown RBP11.74□□□□□ -0.53
GYPA-204ENST00000504786 IER5LQ5T953 404 aa11.72□□□□□ -0.53
GYPA-204ENST00000504786 SEC24BO95487 1268 aa11.7□□□□□ -0.54
GYPA-204ENST00000504786 ECM2O94769 699 aaPredicted RBP11.69□□□□□ -0.54
GYPA-204ENST00000504786 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
GYPA-204ENST00000504786 GOLGA2Q08379 1002 aa11.68□□□□□ -0.54
GYPA-204ENST00000504786 PKD2Q13563 968 aa11.68□□□□□ -0.54
GYPA-204ENST00000504786 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
GYPA-204ENST00000504786 RNF25Q96BH1 459 aaPredicted RBP11.66□□□□□ -0.54
GYPA-204ENST00000504786 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
GYPA-204ENST00000504786 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
GYPA-204ENST00000504786 COLQQ9Y215 455 aaPredicted RBP11.64□□□□□ -0.55
GYPA-204ENST00000504786 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
GYPA-204ENST00000504786 PLCG2P16885 1265 aa11.62□□□□□ -0.55
GYPA-204ENST00000504786 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
GYPA-204ENST00000504786 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
GYPA-204ENST00000504786 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
GYPA-204ENST00000504786 OCEL1Q9H607 264 aa11.59□□□□□ -0.55
GYPA-204ENST00000504786 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
GYPA-204ENST00000504786 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
GYPA-204ENST00000504786 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
GYPA-204ENST00000504786 RGL2O15211 777 aa11.56□□□□□ -0.56
GYPA-204ENST00000504786 POTEJP0CG39 1038 aa11.55□□□□□ -0.56
GYPA-204ENST00000504786 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
GYPA-204ENST00000504786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
GYPA-204ENST00000504786 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
GYPA-204ENST00000504786 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
GYPA-204ENST00000504786 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
GYPA-204ENST00000504786 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
GYPA-204ENST00000504786 STK25O00506 426 aa11.47□□□□□ -0.57
GYPA-204ENST00000504786 STK24Q9Y6E0 443 aa11.47□□□□□ -0.57
GYPA-204ENST00000504786 SOX12O15370 315 aa11.45□□□□□ -0.58
GYPA-204ENST00000504786 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
GYPA-204ENST00000504786 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
GYPA-204ENST00000504786 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
GYPA-204ENST00000504786 G3V3G9 751 aa11.38□□□□□ -0.59
GYPA-204ENST00000504786 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
GYPA-204ENST00000504786 PHF8Q9UPP1 1060 aa11.37□□□□□ -0.59
GYPA-204ENST00000504786 NLRP6P59044 892 aa11.36□□□□□ -0.59
GYPA-204ENST00000504786 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
GYPA-204ENST00000504786 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
GYPA-204ENST00000504786 BOLA1Q9Y3E2 137 aa11.34□□□□□ -0.59
GYPA-204ENST00000504786 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
GYPA-204ENST00000504786 HS6ST3Q8IZP7 471 aa11.33□□□□□ -0.6
GYPA-204ENST00000504786 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
GYPA-204ENST00000504786 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
GYPA-204ENST00000504786 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
GYPA-204ENST00000504786 DCAF8L2P0C7V8 631 aa11.29□□□□□ -0.6
GYPA-204ENST00000504786 FBXO22Q8NEZ5 403 aa11.29□□□□□ -0.6
GYPA-204ENST00000504786 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
GYPA-204ENST00000504786 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
GYPA-204ENST00000504786 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
GYPA-204ENST00000504786 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
GYPA-204ENST00000504786 SNPHO15079 494 aa11.2□□□□□ -0.62
GYPA-204ENST00000504786 DNAJC5Q9H3Z4 198 aa11.2□□□□□ -0.62
GYPA-204ENST00000504786 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
GYPA-204ENST00000504786 RYDENQ9NUL5 291 aaKnown RBP11.14□□□□□ -0.63
GYPA-204ENST00000504786 PPP1R37O75864 691 aa11.13□□□□□ -0.63
GYPA-204ENST00000504786 LCE2DQ5TA82 110 aaPredicted RBP11.11□□□□□ -0.63
GYPA-204ENST00000504786 ST18O60284 1047 aa11.1□□□□□ -0.63
GYPA-204ENST00000504786 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
GYPA-204ENST00000504786 POTEMA6NI47 508 aa11.08□□□□□ -0.64
GYPA-204ENST00000504786 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
GYPA-204ENST00000504786 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms