RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAM212AQ96EL1 285 aa15.85■□□□□ 0.13
NIPBL-203ENST00000503274 GSE1Q14687 1217 aa15.84■□□□□ 0.13
NIPBL-203ENST00000503274 DCAF8Q5TAQ9 597 aa15.84■□□□□ 0.13
NIPBL-203ENST00000503274 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
NIPBL-203ENST00000503274 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
NIPBL-203ENST00000503274 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
NIPBL-203ENST00000503274 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
NIPBL-203ENST00000503274 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
NIPBL-203ENST00000503274 ZNF579Q8NAF0 562 aaKnown RBP15.7■□□□□ 0.1
NIPBL-203ENST00000503274 PHF12Q96QT6 1004 aa15.63■□□□□ 0.09
NIPBL-203ENST00000503274 CHRM1P11229 460 aaPredicted RBP15.62■□□□□ 0.09
NIPBL-203ENST00000503274 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
NIPBL-203ENST00000503274 PYGBP11216 843 aa15.6■□□□□ 0.09
NIPBL-203ENST00000503274 RGL2O15211 777 aa15.57■□□□□ 0.08
NIPBL-203ENST00000503274 CLCN6P51797 869 aa15.57■□□□□ 0.08
NIPBL-203ENST00000503274 GALR2O43603 387 aaPredicted RBP15.54■□□□□ 0.08
NIPBL-203ENST00000503274 LHX8Q68G74 356 aa15.54■□□□□ 0.08
NIPBL-203ENST00000503274 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
NIPBL-203ENST00000503274 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
NIPBL-203ENST00000503274 RNF25Q96BH1 459 aaPredicted RBP15.49■□□□□ 0.07
NIPBL-203ENST00000503274 DCBLD2Q96PD2 775 aa15.49■□□□□ 0.07
NIPBL-203ENST00000503274 RIOK3O14730 519 aaKnown RBP15.46■□□□□ 0.07
NIPBL-203ENST00000503274 KIF12Q96FN5 646 aa15.46■□□□□ 0.07
NIPBL-203ENST00000503274 MAP3K13O43283 966 aa15.43■□□□□ 0.06
NIPBL-203ENST00000503274 ZNF467Q7Z7K2 595 aaPredicted RBP15.42■□□□□ 0.06
NIPBL-203ENST00000503274 MS4A3Q96HJ5 214 aa15.42■□□□□ 0.06
NIPBL-203ENST00000503274 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
NIPBL-203ENST00000503274 PCDHB13Q9Y5F0 798 aa15.41■□□□□ 0.06
NIPBL-203ENST00000503274 TAOK2Q9UL54 1235 aa15.4■□□□□ 0.06
NIPBL-203ENST00000503274 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
NIPBL-203ENST00000503274 PCDHB8Q9UN66 801 aa15.37■□□□□ 0.05
NIPBL-203ENST00000503274 IFNL1Q8IU54 200 aa15.35■□□□□ 0.05
NIPBL-203ENST00000503274 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
NIPBL-203ENST00000503274 PDAP1Q13442 181 aaKnown RBP15.28■□□□□ 0.04
NIPBL-203ENST00000503274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.27■□□□□ 0.04
NIPBL-203ENST00000503274 ZFP91Q96JP5 570 aaPredicted RBP15.27■□□□□ 0.04
NIPBL-203ENST00000503274 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
NIPBL-203ENST00000503274 PSEN1P49768 467 aa15.25■□□□□ 0.03
NIPBL-203ENST00000503274 HS6ST3Q8IZP7 471 aa15.25■□□□□ 0.03
NIPBL-203ENST00000503274 STK25O00506 426 aa15.24■□□□□ 0.03
NIPBL-203ENST00000503274 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
NIPBL-203ENST00000503274 ASTLQ6HA08 431 aaPredicted RBP15.2■□□□□ 0.02
NIPBL-203ENST00000503274 BCL11BQ9C0K0 894 aaPredicted RBP15.2■□□□□ 0.02
NIPBL-203ENST00000503274 ATMINO43313 823 aaPredicted RBP15.19■□□□□ 0.02
NIPBL-203ENST00000503274 STK24Q9Y6E0 443 aa15.18■□□□□ 0.02
NIPBL-203ENST00000503274 BBXQ8WY36 941 aaPredicted RBP15.17■□□□□ 0.02
NIPBL-203ENST00000503274 BMP2KQ9NSY1 1161 aaPredicted RBP15.14■□□□□ 0.01
NIPBL-203ENST00000503274 ATN1P54259 1190 aaPredicted RBP15.13■□□□□ 0.01
NIPBL-203ENST00000503274 TIE1P35590 1138 aa15.12■□□□□ 0.01
NIPBL-203ENST00000503274 TMEM106CQ9BVX2 250 aa15.12■□□□□ 0.01
NIPBL-203ENST00000503274 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
NIPBL-203ENST00000503274 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
NIPBL-203ENST00000503274 TTLL13PA6NNM8 815 aa15.06■□□□□ 0
NIPBL-203ENST00000503274 CABP2Q9NPB3 220 aa15.05■□□□□ -0
NIPBL-203ENST00000503274 METRNQ9UJH8 293 aa15.04■□□□□ -0
NIPBL-203ENST00000503274 POTEB2H3BUK9 544 aa15.03■□□□□ -0
NIPBL-203ENST00000503274 NKX1-1Q15270 411 aaPredicted RBP15.02■□□□□ -0
NIPBL-203ENST00000503274 SLC39A7Q92504 469 aa15.02■□□□□ -0
NIPBL-203ENST00000503274 GOLGA2Q08379 1002 aa14.99□□□□□ -0.01
NIPBL-203ENST00000503274 C7P10643 843 aa14.98□□□□□ -0.01
NIPBL-203ENST00000503274 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
NIPBL-203ENST00000503274 EFCAB3Q8N7B9 438 aa14.98□□□□□ -0.01
NIPBL-203ENST00000503274 PAXIP1Q6ZW49 1069 aaPredicted RBP14.97□□□□□ -0.01
NIPBL-203ENST00000503274 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
NIPBL-203ENST00000503274 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
NIPBL-203ENST00000503274 TRIM35Q9UPQ4 493 aa14.96□□□□□ -0.01
NIPBL-203ENST00000503274 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
NIPBL-203ENST00000503274 POTEFA5A3E0 1075 aa14.93□□□□□ -0.02
NIPBL-203ENST00000503274 SOX12O15370 315 aa14.93□□□□□ -0.02
NIPBL-203ENST00000503274 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
NIPBL-203ENST00000503274 RYDENQ9NUL5 291 aaKnown RBP14.91□□□□□ -0.02
NIPBL-203ENST00000503274 GTPBP6O43824 516 aaPredicted RBP14.9□□□□□ -0.02
NIPBL-203ENST00000503274 MFRPQ9BY79 579 aa14.89□□□□□ -0.03
NIPBL-203ENST00000503274 POTEJP0CG39 1038 aa14.87□□□□□ -0.03
NIPBL-203ENST00000503274 NLRP6P59044 892 aa14.86□□□□□ -0.03
NIPBL-203ENST00000503274 PHF8Q9UPP1 1060 aa14.86□□□□□ -0.03
NIPBL-203ENST00000503274 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
NIPBL-203ENST00000503274 FBXO22Q8NEZ5 403 aa14.83□□□□□ -0.04
NIPBL-203ENST00000503274 IER5LQ5T953 404 aa14.81□□□□□ -0.04
NIPBL-203ENST00000503274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■■■■■ 28.5
NIPBL-203ENST00000503274 SEC24BO95487 1268 aa14.79□□□□□ -0.04
NIPBL-203ENST00000503274 SLC24A1O60721 1099 aa14.77□□□□□ -0.05
NIPBL-203ENST00000503274 MAMSTRQ6ZN01 415 aa14.77□□□□□ -0.05
NIPBL-203ENST00000503274 ILDR1Q86SU0 546 aaPredicted RBP14.77□□□□□ -0.05
NIPBL-203ENST00000503274 HAP1P54257 671 aaPredicted RBP14.76□□□□□ -0.05
NIPBL-203ENST00000503274 IRX5P78411 483 aaPredicted RBP14.75□□□□□ -0.05
NIPBL-203ENST00000503274 MS4A4AQ96JQ5 239 aa14.75□□□□□ -0.05
NIPBL-203ENST00000503274 OCEL1Q9H607 264 aa14.73□□□□□ -0.05
NIPBL-203ENST00000503274 PPP1R37O75864 691 aa14.7□□□□□ -0.06
NIPBL-203ENST00000503274 PLCG2P16885 1265 aa14.7□□□□□ -0.06
NIPBL-203ENST00000503274 SCUBE2Q9NQ36 999 aa14.7□□□□□ -0.06
NIPBL-203ENST00000503274 PDCD7Q8N8D1 485 aaKnown RBP14.69□□□□□ -0.06
NIPBL-203ENST00000503274 PLSCR2Q9NRY7 297 aa14.69□□□□□ -0.06
NIPBL-203ENST00000503274 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
NIPBL-203ENST00000503274 DPY19L2Q6NUT2 758 aa14.65□□□□□ -0.06
NIPBL-203ENST00000503274 POTEMA6NI47 508 aa14.64□□□□□ -0.07
NIPBL-203ENST00000503274 POTEGQ6S5H5 508 aa14.61□□□□□ -0.07
NIPBL-203ENST00000503274 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
NIPBL-203ENST00000503274 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
NIPBL-203ENST00000503274 G3V3G9 751 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms