RNA–Protein interactions for RNA: ENST00000500728.2

LRPAP1-202, Transcript of LDL receptor related protein associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPAP1, Length 7,819 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-202ENST00000500728 NAP1L5Q96NT1 182 aaPredicted RBP16.63■□□□□ 0.25
LRPAP1-202ENST00000500728 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
LRPAP1-202ENST00000500728 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
LRPAP1-202ENST00000500728 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
LRPAP1-202ENST00000500728 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
LRPAP1-202ENST00000500728 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
LRPAP1-202ENST00000500728 BECN1Q14457 450 aa16.59■□□□□ 0.25
LRPAP1-202ENST00000500728 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
LRPAP1-202ENST00000500728 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.24
LRPAP1-202ENST00000500728 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
LRPAP1-202ENST00000500728 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
LRPAP1-202ENST00000500728 NPHP1O15259 732 aa16.54■□□□□ 0.24
LRPAP1-202ENST00000500728 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
LRPAP1-202ENST00000500728 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
LRPAP1-202ENST00000500728 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
LRPAP1-202ENST00000500728 GOLGA6L22H0YM25 854 aa16.52■□□□□ 0.23
LRPAP1-202ENST00000500728 MIER1Q8N108 512 aa16.51■□□□□ 0.23
LRPAP1-202ENST00000500728 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
LRPAP1-202ENST00000500728 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
LRPAP1-202ENST00000500728 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
LRPAP1-202ENST00000500728 ZRSR1Q15695 479 aaKnown RBP16.43■□□□□ 0.22
LRPAP1-202ENST00000500728 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
LRPAP1-202ENST00000500728 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
LRPAP1-202ENST00000500728 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
LRPAP1-202ENST00000500728 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
LRPAP1-202ENST00000500728 LMOD2Q6P5Q4 547 aa16.34■□□□□ 0.21
LRPAP1-202ENST00000500728 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
LRPAP1-202ENST00000500728 SUPT16HQ9Y5B9 1047 aaKnown RBP16.32■□□□□ 0.2
LRPAP1-202ENST00000500728 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
LRPAP1-202ENST00000500728 CLSTN1O94985 981 aa16.3■□□□□ 0.2
LRPAP1-202ENST00000500728 FTSJ3Q8IY81 847 aaKnown RBP16.3■□□□□ 0.2
LRPAP1-202ENST00000500728 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
LRPAP1-202ENST00000500728 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
LRPAP1-202ENST00000500728 CASC1Q6TDU7 716 aa16.29■□□□□ 0.2
LRPAP1-202ENST00000500728 DEKP35659 375 aaKnown RBP16.28■□□□□ 0.2
LRPAP1-202ENST00000500728 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
LRPAP1-202ENST00000500728 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
LRPAP1-202ENST00000500728 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
LRPAP1-202ENST00000500728 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
LRPAP1-202ENST00000500728 RGS3P49796 1198 aa16.24■□□□□ 0.19
LRPAP1-202ENST00000500728 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
LRPAP1-202ENST00000500728 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
LRPAP1-202ENST00000500728 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
LRPAP1-202ENST00000500728 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
LRPAP1-202ENST00000500728 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
LRPAP1-202ENST00000500728 GOLGA6L6A8MZA4 724 aa16.22■□□□□ 0.19
LRPAP1-202ENST00000500728 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
LRPAP1-202ENST00000500728 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
LRPAP1-202ENST00000500728 FGD1P98174 961 aa16.2■□□□□ 0.18
LRPAP1-202ENST00000500728 ARID3AQ99856 593 aa16.2■□□□□ 0.18
LRPAP1-202ENST00000500728 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
LRPAP1-202ENST00000500728 SPRYD3Q8NCJ5 442 aa16.2■□□□□ 0.18
LRPAP1-202ENST00000500728 CHMP7Q8WUX9 453 aaPredicted RBP16.18■□□□□ 0.18
LRPAP1-202ENST00000500728 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
LRPAP1-202ENST00000500728 ISY1Q9ULR0 285 aaKnown RBP16.16■□□□□ 0.18
LRPAP1-202ENST00000500728 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
LRPAP1-202ENST00000500728 KCNJ4P48050 445 aa16.16■□□□□ 0.18
LRPAP1-202ENST00000500728 PPP4R2Q9NY27 417 aa16.14■□□□□ 0.17
LRPAP1-202ENST00000500728 L1TD1Q5T7N2 865 aaKnown RBP16.14■□□□□ 0.17
LRPAP1-202ENST00000500728 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
LRPAP1-202ENST00000500728 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
LRPAP1-202ENST00000500728 NRDCO43847 1150 aa16.13■□□□□ 0.17
LRPAP1-202ENST00000500728 AEBP2Q6ZN18 517 aaPredicted RBP16.12■□□□□ 0.17
LRPAP1-202ENST00000500728 B4GALNT3Q6L9W6 998 aa16.12■□□□□ 0.17
LRPAP1-202ENST00000500728 DRC7Q8IY82 874 aa16.12■□□□□ 0.17
LRPAP1-202ENST00000500728 PRM3Q9NNZ6 103 aa16.1■□□□□ 0.17
LRPAP1-202ENST00000500728 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
LRPAP1-202ENST00000500728 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
LRPAP1-202ENST00000500728 MAPK8IP3Q9UPT6 1336 aa16.09■□□□□ 0.17
LRPAP1-202ENST00000500728 SOX12O15370 315 aa16.08■□□□□ 0.16
LRPAP1-202ENST00000500728 TNNT3P45378 269 aaPredicted RBP16.06■□□□□ 0.16
LRPAP1-202ENST00000500728 U2SURPO15042 1029 aaKnown RBP16.06■□□□□ 0.16
LRPAP1-202ENST00000500728 GOLGA6L4A6NEF3 574 aa16.06■□□□□ 0.16
LRPAP1-202ENST00000500728 HSCBQ8IWL3 235 aa16.06■□□□□ 0.16
LRPAP1-202ENST00000500728 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.16
LRPAP1-202ENST00000500728 CARD11Q9BXL7 1154 aa16.02■□□□□ 0.16
LRPAP1-202ENST00000500728 GZF1Q9H116 711 aaPredicted RBP16■□□□□ 0.15
LRPAP1-202ENST00000500728 POGKQ9P215 609 aa16■□□□□ 0.15
LRPAP1-202ENST00000500728 APBB1O00213 710 aa15.99■□□□□ 0.15
LRPAP1-202ENST00000500728 PDE4CQ08493 712 aa15.99■□□□□ 0.15
LRPAP1-202ENST00000500728 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
LRPAP1-202ENST00000500728 GNL2Q13823 731 aaKnown RBP15.96■□□□□ 0.15
LRPAP1-202ENST00000500728 MLECQ14165 292 aa15.95■□□□□ 0.14
LRPAP1-202ENST00000500728 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
LRPAP1-202ENST00000500728 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
LRPAP1-202ENST00000500728 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
LRPAP1-202ENST00000500728 KIAA2012Q0VF49 1180 aa15.94■□□□□ 0.14
LRPAP1-202ENST00000500728 TMX4Q9H1E5 349 aaPredicted RBP15.93■□□□□ 0.14
LRPAP1-202ENST00000500728 CCDC9Q9Y3X0 531 aaKnown RBP15.93■□□□□ 0.14
LRPAP1-202ENST00000500728 NOC3LQ8WTT2 800 aaKnown RBP15.93■□□□□ 0.14
LRPAP1-202ENST00000500728 CDCA8Q53HL2 280 aa15.92■□□□□ 0.14
LRPAP1-202ENST00000500728 SAFB2Q14151 953 aaKnown RBP eCLIP15.91■□□□□ 0.14
LRPAP1-202ENST00000500728 KRI1Q8N9T8 703 aaKnown RBP15.89■□□□□ 0.13
LRPAP1-202ENST00000500728 ZNF330Q9Y3S2 320 aaPredicted RBP15.88■□□□□ 0.13
LRPAP1-202ENST00000500728 ZCCHC6Q5VYS8 1495 aaKnown RBP15.88■□□□□ 0.13
LRPAP1-202ENST00000500728 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
LRPAP1-202ENST00000500728 MCCP23508 829 aa15.87■□□□□ 0.13
LRPAP1-202ENST00000500728 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
LRPAP1-202ENST00000500728 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
LRPAP1-202ENST00000500728 GBP4Q96PP9 640 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms