RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
PMPCB-208ENST00000498530 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
PMPCB-208ENST00000498530 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
PMPCB-208ENST00000498530 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
PMPCB-208ENST00000498530 KDM2AQ9Y2K7 1162 aa13.04□□□□□ -0.32
PMPCB-208ENST00000498530 CLCN6P51797 869 aa13.03□□□□□ -0.32
PMPCB-208ENST00000498530 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
PMPCB-208ENST00000498530 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
PMPCB-208ENST00000498530 RGL2O15211 777 aa12.95□□□□□ -0.34
PMPCB-208ENST00000498530 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
PMPCB-208ENST00000498530 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
PMPCB-208ENST00000498530 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
PMPCB-208ENST00000498530 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
PMPCB-208ENST00000498530 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
PMPCB-208ENST00000498530 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
PMPCB-208ENST00000498530 PLSCR2Q9NRY7 297 aa12.87□□□□□ -0.35
PMPCB-208ENST00000498530 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
PMPCB-208ENST00000498530 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
PMPCB-208ENST00000498530 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
PMPCB-208ENST00000498530 MIER1Q8N108 512 aa12.82□□□□□ -0.36
PMPCB-208ENST00000498530 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
PMPCB-208ENST00000498530 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
PMPCB-208ENST00000498530 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
PMPCB-208ENST00000498530 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
PMPCB-208ENST00000498530 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
PMPCB-208ENST00000498530 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
PMPCB-208ENST00000498530 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
PMPCB-208ENST00000498530 HS6ST3Q8IZP7 471 aa12.74□□□□□ -0.37
PMPCB-208ENST00000498530 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
PMPCB-208ENST00000498530 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
PMPCB-208ENST00000498530 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
PMPCB-208ENST00000498530 NBR1Q14596 966 aa12.64□□□□□ -0.39
PMPCB-208ENST00000498530 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
PMPCB-208ENST00000498530 POTEMA6NI47 508 aa12.61□□□□□ -0.39
PMPCB-208ENST00000498530 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
PMPCB-208ENST00000498530 GSE1Q14687 1217 aa12.6□□□□□ -0.39
PMPCB-208ENST00000498530 RNF25Q96BH1 459 aaPredicted RBP12.59□□□□□ -0.39
PMPCB-208ENST00000498530 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
PMPCB-208ENST00000498530 ASTLQ6HA08 431 aaPredicted RBP12.52□□□□□ -0.41
PMPCB-208ENST00000498530 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.41
PMPCB-208ENST00000498530 METRNQ9UJH8 293 aa12.52□□□□□ -0.41
PMPCB-208ENST00000498530 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
PMPCB-208ENST00000498530 NUBP1P53384 320 aa12.5□□□□□ -0.41
PMPCB-208ENST00000498530 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
PMPCB-208ENST00000498530 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
PMPCB-208ENST00000498530 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
PMPCB-208ENST00000498530 GTPBP6O43824 516 aaPredicted RBP12.47□□□□□ -0.41
PMPCB-208ENST00000498530 SLC39A7Q92504 469 aa12.46□□□□□ -0.41
PMPCB-208ENST00000498530 C7P10643 843 aa12.45□□□□□ -0.42
PMPCB-208ENST00000498530 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
PMPCB-208ENST00000498530 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
PMPCB-208ENST00000498530 PCDH10Q9P2E7 1040 aa12.39□□□□□ -0.43
PMPCB-208ENST00000498530 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
PMPCB-208ENST00000498530 LCE2DQ5TA82 110 aaPredicted RBP12.38□□□□□ -0.43
PMPCB-208ENST00000498530 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
PMPCB-208ENST00000498530 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
PMPCB-208ENST00000498530 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
PMPCB-208ENST00000498530 STK25O00506 426 aa12.36□□□□□ -0.43
PMPCB-208ENST00000498530 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
PMPCB-208ENST00000498530 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
PMPCB-208ENST00000498530 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
PMPCB-208ENST00000498530 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
PMPCB-208ENST00000498530 SCUBE2Q9NQ36 999 aa12.3□□□□□ -0.44
PMPCB-208ENST00000498530 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
PMPCB-208ENST00000498530 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
PMPCB-208ENST00000498530 TIMELESSQ9UNS1 1208 aa12.29□□□□□ -0.44
PMPCB-208ENST00000498530 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
PMPCB-208ENST00000498530 BMP2KQ9NSY1 1161 aaPredicted RBP12.28□□□□□ -0.44
PMPCB-208ENST00000498530 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.45
PMPCB-208ENST00000498530 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
PMPCB-208ENST00000498530 TRPC6Q9Y210 931 aa12.26□□□□□ -0.45
PMPCB-208ENST00000498530 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
PMPCB-208ENST00000498530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.24□□□□□ -0.45
PMPCB-208ENST00000498530 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
PMPCB-208ENST00000498530 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
PMPCB-208ENST00000498530 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
PMPCB-208ENST00000498530 TMEM132AQ24JP5 1023 aa12.22□□□□□ -0.45
PMPCB-208ENST00000498530 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
PMPCB-208ENST00000498530 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
PMPCB-208ENST00000498530 MAP3K13O43283 966 aa12.19□□□□□ -0.46
PMPCB-208ENST00000498530 TIE1P35590 1138 aa12.19□□□□□ -0.46
PMPCB-208ENST00000498530 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
PMPCB-208ENST00000498530 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
PMPCB-208ENST00000498530 PYGBP11216 843 aa12.1□□□□□ -0.47
PMPCB-208ENST00000498530 KCNV2Q8TDN2 545 aa12.09□□□□□ -0.47
PMPCB-208ENST00000498530 SEC24BO95487 1268 aa12.08□□□□□ -0.48
PMPCB-208ENST00000498530 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
PMPCB-208ENST00000498530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
PMPCB-208ENST00000498530 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
PMPCB-208ENST00000498530 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
PMPCB-208ENST00000498530 ARXQ96QS3 562 aa12.05□□□□□ -0.48
PMPCB-208ENST00000498530 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
PMPCB-208ENST00000498530 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
PMPCB-208ENST00000498530 IER5LQ5T953 404 aa12.03□□□□□ -0.48
PMPCB-208ENST00000498530 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
PMPCB-208ENST00000498530 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
PMPCB-208ENST00000498530 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
PMPCB-208ENST00000498530 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
PMPCB-208ENST00000498530 ST18O60284 1047 aa11.95□□□□□ -0.5
PMPCB-208ENST00000498530 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms