RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 CLCN6P51797 869 aa14.1□□□□□ -0.15
RAB3GAP1-206ENST00000497080 CCDC61Q9Y6R9 512 aa14.1□□□□□ -0.15
RAB3GAP1-206ENST00000497080 FAM212AQ96EL1 285 aa14.06□□□□□ -0.16
RAB3GAP1-206ENST00000497080 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
RAB3GAP1-206ENST00000497080 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
RAB3GAP1-206ENST00000497080 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
RAB3GAP1-206ENST00000497080 KIF12Q96FN5 646 aa14.01□□□□□ -0.17
RAB3GAP1-206ENST00000497080 MS4A3Q96HJ5 214 aa13.97□□□□□ -0.17
RAB3GAP1-206ENST00000497080 MAP3K13O43283 966 aa13.96□□□□□ -0.17
RAB3GAP1-206ENST00000497080 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
RAB3GAP1-206ENST00000497080 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
RAB3GAP1-206ENST00000497080 GSE1Q14687 1217 aa13.92□□□□□ -0.18
RAB3GAP1-206ENST00000497080 PYGBP11216 843 aa13.9□□□□□ -0.18
RAB3GAP1-206ENST00000497080 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
RAB3GAP1-206ENST00000497080 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
RAB3GAP1-206ENST00000497080 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
RAB3GAP1-206ENST00000497080 TRPC6Q9Y210 931 aa13.83□□□□□ -0.2
RAB3GAP1-206ENST00000497080 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
RAB3GAP1-206ENST00000497080 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
RAB3GAP1-206ENST00000497080 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
RAB3GAP1-206ENST00000497080 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
RAB3GAP1-206ENST00000497080 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
RAB3GAP1-206ENST00000497080 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
RAB3GAP1-206ENST00000497080 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
RAB3GAP1-206ENST00000497080 TIE1P35590 1138 aa13.72□□□□□ -0.21
RAB3GAP1-206ENST00000497080 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
RAB3GAP1-206ENST00000497080 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
RAB3GAP1-206ENST00000497080 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
RAB3GAP1-206ENST00000497080 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
RAB3GAP1-206ENST00000497080 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
RAB3GAP1-206ENST00000497080 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
RAB3GAP1-206ENST00000497080 C7P10643 843 aa13.6□□□□□ -0.23
RAB3GAP1-206ENST00000497080 LHX8Q68G74 356 aa13.6□□□□□ -0.23
RAB3GAP1-206ENST00000497080 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
RAB3GAP1-206ENST00000497080 METRNQ9UJH8 293 aa13.59□□□□□ -0.23
RAB3GAP1-206ENST00000497080 PSEN1P49768 467 aa13.57□□□□□ -0.24
RAB3GAP1-206ENST00000497080 PKD2Q13563 968 aa13.54□□□□□ -0.24
RAB3GAP1-206ENST00000497080 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
RAB3GAP1-206ENST00000497080 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
RAB3GAP1-206ENST00000497080 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
RAB3GAP1-206ENST00000497080 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
RAB3GAP1-206ENST00000497080 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
RAB3GAP1-206ENST00000497080 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
RAB3GAP1-206ENST00000497080 SEC24BO95487 1268 aa13.47□□□□□ -0.25
RAB3GAP1-206ENST00000497080 IER5LQ5T953 404 aa13.47□□□□□ -0.25
RAB3GAP1-206ENST00000497080 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
RAB3GAP1-206ENST00000497080 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
RAB3GAP1-206ENST00000497080 RGL2O15211 777 aa13.4□□□□□ -0.26
RAB3GAP1-206ENST00000497080 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
RAB3GAP1-206ENST00000497080 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
RAB3GAP1-206ENST00000497080 CABP2Q9NPB3 220 aa13.4□□□□□ -0.26
RAB3GAP1-206ENST00000497080 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
RAB3GAP1-206ENST00000497080 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
RAB3GAP1-206ENST00000497080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
RAB3GAP1-206ENST00000497080 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
RAB3GAP1-206ENST00000497080 PLCG2P16885 1265 aa13.37□□□□□ -0.27
RAB3GAP1-206ENST00000497080 OCEL1Q9H607 264 aa13.36□□□□□ -0.27
RAB3GAP1-206ENST00000497080 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
RAB3GAP1-206ENST00000497080 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
RAB3GAP1-206ENST00000497080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.285e-12■■■■■ 30
RAB3GAP1-206ENST00000497080 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
RAB3GAP1-206ENST00000497080 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
RAB3GAP1-206ENST00000497080 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
RAB3GAP1-206ENST00000497080 PDCD7Q8N8D1 485 aaKnown RBP13.26□□□□□ -0.29
RAB3GAP1-206ENST00000497080 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
RAB3GAP1-206ENST00000497080 STK25O00506 426 aa13.25□□□□□ -0.29
RAB3GAP1-206ENST00000497080 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
RAB3GAP1-206ENST00000497080 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
RAB3GAP1-206ENST00000497080 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
RAB3GAP1-206ENST00000497080 SOX12O15370 315 aa13.18□□□□□ -0.3
RAB3GAP1-206ENST00000497080 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
RAB3GAP1-206ENST00000497080 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
RAB3GAP1-206ENST00000497080 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
RAB3GAP1-206ENST00000497080 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
RAB3GAP1-206ENST00000497080 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
RAB3GAP1-206ENST00000497080 NLRP6P59044 892 aa13.08□□□□□ -0.32
RAB3GAP1-206ENST00000497080 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
RAB3GAP1-206ENST00000497080 BOLA1Q9Y3E2 137 aa13.08□□□□□ -0.32
RAB3GAP1-206ENST00000497080 HS6ST3Q8IZP7 471 aa13.07□□□□□ -0.32
RAB3GAP1-206ENST00000497080 MFRPQ9BY79 579 aa13.07□□□□□ -0.32
RAB3GAP1-206ENST00000497080 G3V3G9 751 aa13.06□□□□□ -0.32
RAB3GAP1-206ENST00000497080 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
RAB3GAP1-206ENST00000497080 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
RAB3GAP1-206ENST00000497080 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
RAB3GAP1-206ENST00000497080 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
RAB3GAP1-206ENST00000497080 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
RAB3GAP1-206ENST00000497080 TMEM121BQ9BXQ6 578 aaPredicted RBP12.99□□□□□ -0.33
RAB3GAP1-206ENST00000497080 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
RAB3GAP1-206ENST00000497080 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
RAB3GAP1-206ENST00000497080 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
RAB3GAP1-206ENST00000497080 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
RAB3GAP1-206ENST00000497080 PPP1R37O75864 691 aa12.91□□□□□ -0.34
RAB3GAP1-206ENST00000497080 TMEM92Q6UXU6 159 aa12.86□□□□□ -0.35
RAB3GAP1-206ENST00000497080 SNPHO15079 494 aa12.84□□□□□ -0.35
RAB3GAP1-206ENST00000497080 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
RAB3GAP1-206ENST00000497080 ST18O60284 1047 aa12.8□□□□□ -0.36
RAB3GAP1-206ENST00000497080 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
RAB3GAP1-206ENST00000497080 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
RAB3GAP1-206ENST00000497080 POTEMA6NI47 508 aa12.76□□□□□ -0.37
RAB3GAP1-206ENST00000497080 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms