RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 RASEFQ8IZ41 740 aa16.36■□□□□ 0.21
CLTC-208ENST00000496076 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
CLTC-208ENST00000496076 KIF12Q96FN5 646 aa16.32■□□□□ 0.2
CLTC-208ENST00000496076 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
CLTC-208ENST00000496076 ASTLQ6HA08 431 aaPredicted RBP16.29■□□□□ 0.2
CLTC-208ENST00000496076 ATMINO43313 823 aaPredicted RBP16.27■□□□□ 0.2
CLTC-208ENST00000496076 MAP3K13O43283 966 aa16.24■□□□□ 0.19
CLTC-208ENST00000496076 POTEB2H3BUK9 544 aa16.23■□□□□ 0.19
CLTC-208ENST00000496076 NUBP1P53384 320 aa16.22■□□□□ 0.19
CLTC-208ENST00000496076 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
CLTC-208ENST00000496076 METRNQ9UJH8 293 aa16.18■□□□□ 0.18
CLTC-208ENST00000496076 SLC39A7Q92504 469 aa16.17■□□□□ 0.18
CLTC-208ENST00000496076 C7P10643 843 aa16.16■□□□□ 0.18
CLTC-208ENST00000496076 ATN1P54259 1190 aaPredicted RBP16.16■□□□□ 0.18
CLTC-208ENST00000496076 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
CLTC-208ENST00000496076 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
CLTC-208ENST00000496076 BMP2KQ9NSY1 1161 aaPredicted RBP16.12■□□□□ 0.17
CLTC-208ENST00000496076 FAM212AQ96EL1 285 aa16.1■□□□□ 0.17
CLTC-208ENST00000496076 TIE1P35590 1138 aa16.09■□□□□ 0.17
CLTC-208ENST00000496076 PCDHB13Q9Y5F0 798 aa16.08■□□□□ 0.16
CLTC-208ENST00000496076 SGIP1Q9BQI5 828 aa16.07■□□□□ 0.16
CLTC-208ENST00000496076 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
CLTC-208ENST00000496076 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
CLTC-208ENST00000496076 POTEJP0CG39 1038 aa16■□□□□ 0.15
CLTC-208ENST00000496076 VASPP50552 380 aaPredicted RBP15.98■□□□□ 0.15
CLTC-208ENST00000496076 IFNL1Q8IU54 200 aa15.98■□□□□ 0.15
CLTC-208ENST00000496076 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
CLTC-208ENST00000496076 POTEFA5A3E0 1075 aa15.95■□□□□ 0.14
CLTC-208ENST00000496076 MAMSTRQ6ZN01 415 aa15.92■□□□□ 0.14
CLTC-208ENST00000496076 PYGBP11216 843 aa15.91■□□□□ 0.14
CLTC-208ENST00000496076 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
CLTC-208ENST00000496076 SEC24BO95487 1268 aa15.88■□□□□ 0.13
CLTC-208ENST00000496076 TMEM106CQ9BVX2 250 aa15.87■□□□□ 0.13
CLTC-208ENST00000496076 COLQQ9Y215 455 aaPredicted RBP15.87■□□□□ 0.13
CLTC-208ENST00000496076 SCUBE2Q9NQ36 999 aa15.84■□□□□ 0.13
CLTC-208ENST00000496076 IER5LQ5T953 404 aa15.83■□□□□ 0.12
CLTC-208ENST00000496076 GSE1Q14687 1217 aa15.8■□□□□ 0.12
CLTC-208ENST00000496076 PCDHB8Q9UN66 801 aa15.79■□□□□ 0.12
CLTC-208ENST00000496076 IFNLR1Q8IU57 520 aaPredicted RBP15.71■□□□□ 0.11
CLTC-208ENST00000496076 POTEMA6NI47 508 aa15.68■□□□□ 0.1
CLTC-208ENST00000496076 PLCG2P16885 1265 aa15.68■□□□□ 0.1
CLTC-208ENST00000496076 CHRM1P11229 460 aaPredicted RBP15.67■□□□□ 0.1
CLTC-208ENST00000496076 SPOCK2Q92563 424 aa15.67■□□□□ 0.1
CLTC-208ENST00000496076 ZNF467Q7Z7K2 595 aaPredicted RBP15.66■□□□□ 0.1
CLTC-208ENST00000496076 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
CLTC-208ENST00000496076 POTEGQ6S5H5 508 aa15.65■□□□□ 0.1
CLTC-208ENST00000496076 FAM163AQ96GL9 167 aaPredicted RBP15.64■□□□□ 0.09
CLTC-208ENST00000496076 OCEL1Q9H607 264 aa15.6■□□□□ 0.09
CLTC-208ENST00000496076 CIZ1Q9ULV3 898 aaPredicted RBP15.6■□□□□ 0.09
CLTC-208ENST00000496076 LCE2DQ5TA82 110 aaPredicted RBP15.57■□□□□ 0.08
CLTC-208ENST00000496076 PLSCR2Q9NRY7 297 aa15.56■□□□□ 0.08
CLTC-208ENST00000496076 PSEN1P49768 467 aa15.54■□□□□ 0.08
CLTC-208ENST00000496076 SLAIN1Q8ND83 568 aa15.53■□□□□ 0.08
CLTC-208ENST00000496076 GOLGA2Q08379 1002 aa15.52■□□□□ 0.08
CLTC-208ENST00000496076 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
CLTC-208ENST00000496076 PDAP1Q13442 181 aaKnown RBP15.47■□□□□ 0.07
CLTC-208ENST00000496076 PDCD7Q8N8D1 485 aaKnown RBP15.43■□□□□ 0.06
CLTC-208ENST00000496076 PCDH10Q9P2E7 1040 aa15.42■□□□□ 0.06
CLTC-208ENST00000496076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.41■□□□□ 0.067e-10■■□□□ 12.7
CLTC-208ENST00000496076 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.4■□□□□ 0.06
CLTC-208ENST00000496076 L3MBTL3Q96JM7 780 aaPredicted RBP15.35■□□□□ 0.05
CLTC-208ENST00000496076 CABP2Q9NPB3 220 aa15.35■□□□□ 0.05
CLTC-208ENST00000496076 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
CLTC-208ENST00000496076 ST18O60284 1047 aa15.33■□□□□ 0.04
CLTC-208ENST00000496076 ILDR1Q86SU0 546 aaPredicted RBP15.3■□□□□ 0.04
CLTC-208ENST00000496076 C3orf67Q6ZVT6 689 aa15.29■□□□□ 0.04
CLTC-208ENST00000496076 DPY19L2Q6NUT2 758 aa15.27■□□□□ 0.04
CLTC-208ENST00000496076 SNPHO15079 494 aa15.26■□□□□ 0.03
CLTC-208ENST00000496076 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
CLTC-208ENST00000496076 EFCAB3Q8N7B9 438 aa15.18■□□□□ 0.02
CLTC-208ENST00000496076 G3V3G9 751 aa15.16■□□□□ 0.02
CLTC-208ENST00000496076 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
CLTC-208ENST00000496076 RNF25Q96BH1 459 aaPredicted RBP15.16■□□□□ 0.02
CLTC-208ENST00000496076 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
CLTC-208ENST00000496076 BOLA1Q9Y3E2 137 aa15.16■□□□□ 0.02
CLTC-208ENST00000496076 MARVELD3Q96A59 401 aa15.1■□□□□ 0.01
CLTC-208ENST00000496076 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.09■□□□□ 0.01
CLTC-208ENST00000496076 ZFP91Q96JP5 570 aaPredicted RBP15.09■□□□□ 0.01
CLTC-208ENST00000496076 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
CLTC-208ENST00000496076 SOX12O15370 315 aa15.03■□□□□ -0
CLTC-208ENST00000496076 EMP3P54852 163 aa14.97□□□□□ -0.01
CLTC-208ENST00000496076 PHF8Q9UPP1 1060 aa14.97□□□□□ -0.01
CLTC-208ENST00000496076 MS4A4AQ96JQ5 239 aa14.95□□□□□ -0.02
CLTC-208ENST00000496076 HOXB3P14651 431 aaPredicted RBP14.94□□□□□ -0.02
CLTC-208ENST00000496076 MICALL2Q8IY33 904 aa14.94□□□□□ -0.02
CLTC-208ENST00000496076 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
CLTC-208ENST00000496076 ECM2O94769 699 aaPredicted RBP14.91□□□□□ -0.02
CLTC-208ENST00000496076 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
CLTC-208ENST00000496076 FAM205CA6NFA0 338 aa14.89□□□□□ -0.03
CLTC-208ENST00000496076 ZNF710Q8N1W2 664 aa14.88□□□□□ -0.03
CLTC-208ENST00000496076 STK24Q9Y6E0 443 aa14.88□□□□□ -0.03
CLTC-208ENST00000496076 TMEM92Q6UXU6 159 aa14.87□□□□□ -0.03
CLTC-208ENST00000496076 HS3ST6Q96QI5 342 aa14.87□□□□□ -0.03
CLTC-208ENST00000496076 POTEB3A0JP26 581 aa14.86□□□□□ -0.03
CLTC-208ENST00000496076 NLRP6P59044 892 aa14.86□□□□□ -0.03
CLTC-208ENST00000496076 DOK7Q18PE1 504 aa14.86□□□□□ -0.03
CLTC-208ENST00000496076 POTEBQ6S5H4 581 aa14.86□□□□□ -0.03
CLTC-208ENST00000496076 PKD2Q13563 968 aa14.84□□□□□ -0.03
CLTC-208ENST00000496076 STK25O00506 426 aa14.83□□□□□ -0.04
CLTC-208ENST00000496076 SPNS2Q8IVW8 549 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms