RNA–Protein interactions for RNA: ENST00000495990.5

TRABD2A-209, Transcript of TraB domain containing 2A, humanhuman

TSL 1 (best)

Gene TRABD2A, Length 3,060 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2A-209ENST00000495990 RAD21O60216 631 aa13.7□□□□□ -0.22
TRABD2A-209ENST00000495990 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
TRABD2A-209ENST00000495990 APBB1O00213 710 aa13.69□□□□□ -0.22
TRABD2A-209ENST00000495990 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
TRABD2A-209ENST00000495990 FOXD4L5Q5VV16 416 aaPredicted RBP13.67□□□□□ -0.22
TRABD2A-209ENST00000495990 FOXD4L4Q8WXT5 416 aaPredicted RBP13.67□□□□□ -0.22
TRABD2A-209ENST00000495990 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.23
TRABD2A-209ENST00000495990 RBM25P49756 843 aaKnown RBP13.63□□□□□ -0.23
TRABD2A-209ENST00000495990 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
TRABD2A-209ENST00000495990 MTMR7Q9Y216 660 aa13.61□□□□□ -0.23
TRABD2A-209ENST00000495990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRABD2A-209ENST00000495990 POLR3GLQ9BT43 218 aa13.56□□□□□ -0.24
TRABD2A-209ENST00000495990 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
TRABD2A-209ENST00000495990 TRIM41Q8WV44 630 aa13.55□□□□□ -0.24
TRABD2A-209ENST00000495990 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
TRABD2A-209ENST00000495990 GPBP1L1Q9HC44 474 aaPredicted RBP13.5□□□□□ -0.25
TRABD2A-209ENST00000495990 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
TRABD2A-209ENST00000495990 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
TRABD2A-209ENST00000495990 IL27Q8NEV9 243 aa13.47□□□□□ -0.25
TRABD2A-209ENST00000495990 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
TRABD2A-209ENST00000495990 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
TRABD2A-209ENST00000495990 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
TRABD2A-209ENST00000495990 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
TRABD2A-209ENST00000495990 ZC3H15Q8WU90 426 aaKnown RBP13.42□□□□□ -0.26
TRABD2A-209ENST00000495990 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
TRABD2A-209ENST00000495990 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
TRABD2A-209ENST00000495990 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
TRABD2A-209ENST00000495990 UBE2Q2Q8WVN8 375 aa13.4□□□□□ -0.26
TRABD2A-209ENST00000495990 PROM2Q8N271 834 aa13.39□□□□□ -0.27
TRABD2A-209ENST00000495990 KCNV2Q8TDN2 545 aa13.38□□□□□ -0.27
TRABD2A-209ENST00000495990 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
TRABD2A-209ENST00000495990 BRD2P25440 801 aaKnown RBP13.35□□□□□ -0.27
TRABD2A-209ENST00000495990 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
TRABD2A-209ENST00000495990 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
TRABD2A-209ENST00000495990 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
TRABD2A-209ENST00000495990 TMCO4Q5TGY1 634 aa13.29□□□□□ -0.28
TRABD2A-209ENST00000495990 GZF1Q9H116 711 aaPredicted RBP13.27□□□□□ -0.29
TRABD2A-209ENST00000495990 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
TRABD2A-209ENST00000495990 PDE4CQ08493 712 aa13.25□□□□□ -0.29
TRABD2A-209ENST00000495990 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
TRABD2A-209ENST00000495990 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
TRABD2A-209ENST00000495990 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
TRABD2A-209ENST00000495990 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
TRABD2A-209ENST00000495990 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
TRABD2A-209ENST00000495990 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
TRABD2A-209ENST00000495990 IRX6P78412 446 aaPredicted RBP13.17□□□□□ -0.3
TRABD2A-209ENST00000495990 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
TRABD2A-209ENST00000495990 CWC22Q9HCG8 908 aaKnown RBP13.13□□□□□ -0.31
TRABD2A-209ENST00000495990 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
TRABD2A-209ENST00000495990 SEMA3EO15041 775 aa13.11□□□□□ -0.31
TRABD2A-209ENST00000495990 E9PSI1 815 aa13.1□□□□□ -0.31
TRABD2A-209ENST00000495990 RETREG2Q8NC44 543 aa13.07□□□□□ -0.32
TRABD2A-209ENST00000495990 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
TRABD2A-209ENST00000495990 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
TRABD2A-209ENST00000495990 FBXW7Q969H0 707 aa13.05□□□□□ -0.32
TRABD2A-209ENST00000495990 IRF5Q13568 498 aa13.05□□□□□ -0.32
TRABD2A-209ENST00000495990 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
TRABD2A-209ENST00000495990 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
TRABD2A-209ENST00000495990 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
TRABD2A-209ENST00000495990 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.32
TRABD2A-209ENST00000495990 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.33
TRABD2A-209ENST00000495990 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
TRABD2A-209ENST00000495990 ZMYND10O75800 440 aa12.99□□□□□ -0.33
TRABD2A-209ENST00000495990 STK25O00506 426 aa12.98□□□□□ -0.33
TRABD2A-209ENST00000495990 POLA2Q14181 598 aa12.98□□□□□ -0.33
TRABD2A-209ENST00000495990 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
TRABD2A-209ENST00000495990 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
TRABD2A-209ENST00000495990 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
TRABD2A-209ENST00000495990 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
TRABD2A-209ENST00000495990 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
TRABD2A-209ENST00000495990 ZNF592Q92610 1267 aa12.94□□□□□ -0.34
TRABD2A-209ENST00000495990 BCL11BQ9C0K0 894 aaPredicted RBP12.94□□□□□ -0.34
TRABD2A-209ENST00000495990 ZNF526Q8TF50 670 aaPredicted RBP12.94□□□□□ -0.34
TRABD2A-209ENST00000495990 TRAK2O60296 914 aa12.93□□□□□ -0.34
TRABD2A-209ENST00000495990 HOXD11P31277 338 aaPredicted RBP12.92□□□□□ -0.34
TRABD2A-209ENST00000495990 TMED8Q6PL24 325 aaPredicted RBP12.88□□□□□ -0.35
TRABD2A-209ENST00000495990 CERS3Q8IU89 383 aa12.88□□□□□ -0.35
TRABD2A-209ENST00000495990 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
TRABD2A-209ENST00000495990 A0A0U1RQG5 324 aaPredicted RBP12.87□□□□□ -0.35
TRABD2A-209ENST00000495990 MIER1Q8N108 512 aa12.87□□□□□ -0.35
TRABD2A-209ENST00000495990 CCDC136Q96JN2 1154 aa12.82□□□□□ -0.36
TRABD2A-209ENST00000495990 KDM4AO75164 1064 aa12.82□□□□□ -0.36
TRABD2A-209ENST00000495990 RSPH4AQ5TD94 716 aa12.82□□□□□ -0.36
TRABD2A-209ENST00000495990 CARNS1A5YM72 827 aa12.81□□□□□ -0.36
TRABD2A-209ENST00000495990 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
TRABD2A-209ENST00000495990 SMARCA5O60264 1052 aaPredicted RBP12.79□□□□□ -0.36
TRABD2A-209ENST00000495990 POM121Q96HA1 1249 aa12.79□□□□□ -0.36
TRABD2A-209ENST00000495990 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
TRABD2A-209ENST00000495990 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.36
TRABD2A-209ENST00000495990 UNCXA6NJT0 531 aa12.77□□□□□ -0.37
TRABD2A-209ENST00000495990 BARGINQ6ZT62 677 aa12.77□□□□□ -0.37
TRABD2A-209ENST00000495990 CCDC97Q96F63 343 aaPredicted RBP12.77□□□□□ -0.37
TRABD2A-209ENST00000495990 PDE4DQ08499 809 aa12.77□□□□□ -0.37
TRABD2A-209ENST00000495990 PLEKHG3A1L390 1219 aa12.75□□□□□ -0.37
TRABD2A-209ENST00000495990 AK7Q96M32 723 aa12.75□□□□□ -0.37
TRABD2A-209ENST00000495990 NEFLP07196 543 aa12.73□□□□□ -0.37
TRABD2A-209ENST00000495990 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
TRABD2A-209ENST00000495990 FLIIQ13045 1269 aa12.73□□□□□ -0.37
TRABD2A-209ENST00000495990 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
TRABD2A-209ENST00000495990 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms