RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-225ENST00000495471 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
CCNL1-225ENST00000495471 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
CCNL1-225ENST00000495471 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
CCNL1-225ENST00000495471 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
CCNL1-225ENST00000495471 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
CCNL1-225ENST00000495471 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
CCNL1-225ENST00000495471 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
CCNL1-225ENST00000495471 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
CCNL1-225ENST00000495471 MAP3K13O43283 966 aa12.73□□□□□ -0.37
CCNL1-225ENST00000495471 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
CCNL1-225ENST00000495471 DCBLD2Q96PD2 775 aa12.73□□□□□ -0.37
CCNL1-225ENST00000495471 PYGBP11216 843 aa12.65□□□□□ -0.38
CCNL1-225ENST00000495471 GSE1Q14687 1217 aa12.65□□□□□ -0.38
CCNL1-225ENST00000495471 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
CCNL1-225ENST00000495471 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
CCNL1-225ENST00000495471 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
CCNL1-225ENST00000495471 IFNL1Q8IU54 200 aa12.6□□□□□ -0.39
CCNL1-225ENST00000495471 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
CCNL1-225ENST00000495471 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-225ENST00000495471 ASTLQ6HA08 431 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-225ENST00000495471 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
CCNL1-225ENST00000495471 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
CCNL1-225ENST00000495471 TIE1P35590 1138 aa12.54□□□□□ -0.4
CCNL1-225ENST00000495471 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-225ENST00000495471 CHRM1P11229 460 aaPredicted RBP12.52□□□□□ -0.41
CCNL1-225ENST00000495471 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
CCNL1-225ENST00000495471 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
CCNL1-225ENST00000495471 LHX8Q68G74 356 aa12.46□□□□□ -0.41
CCNL1-225ENST00000495471 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
CCNL1-225ENST00000495471 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
CCNL1-225ENST00000495471 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
CCNL1-225ENST00000495471 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
CCNL1-225ENST00000495471 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
CCNL1-225ENST00000495471 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
CCNL1-225ENST00000495471 C7P10643 843 aa12.41□□□□□ -0.42
CCNL1-225ENST00000495471 POTEB2H3BUK9 544 aa12.37□□□□□ -0.43
CCNL1-225ENST00000495471 PSEN1P49768 467 aa12.35□□□□□ -0.43
CCNL1-225ENST00000495471 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
CCNL1-225ENST00000495471 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
CCNL1-225ENST00000495471 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
CCNL1-225ENST00000495471 IER5LQ5T953 404 aa12.31□□□□□ -0.44
CCNL1-225ENST00000495471 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
CCNL1-225ENST00000495471 PKD2Q13563 968 aa12.3□□□□□ -0.44
CCNL1-225ENST00000495471 SEC24BO95487 1268 aa12.27□□□□□ -0.45
CCNL1-225ENST00000495471 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
CCNL1-225ENST00000495471 POTEJP0CG39 1038 aa12.26□□□□□ -0.45
CCNL1-225ENST00000495471 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
CCNL1-225ENST00000495471 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
CCNL1-225ENST00000495471 OTUD5Q96G74 571 aa12.22□□□□□ -0.45
CCNL1-225ENST00000495471 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
CCNL1-225ENST00000495471 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
CCNL1-225ENST00000495471 PLCG2P16885 1265 aa12.2□□□□□ -0.46
CCNL1-225ENST00000495471 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
CCNL1-225ENST00000495471 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
CCNL1-225ENST00000495471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
CCNL1-225ENST00000495471 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
CCNL1-225ENST00000495471 RGL2O15211 777 aa12.17□□□□□ -0.46
CCNL1-225ENST00000495471 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
CCNL1-225ENST00000495471 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
CCNL1-225ENST00000495471 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
CCNL1-225ENST00000495471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.471e-9■■□□□ 12.1
CCNL1-225ENST00000495471 EFCAB3Q8N7B9 438 aa12.1□□□□□ -0.47
CCNL1-225ENST00000495471 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
CCNL1-225ENST00000495471 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
CCNL1-225ENST00000495471 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
CCNL1-225ENST00000495471 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
CCNL1-225ENST00000495471 STK25O00506 426 aa12.04□□□□□ -0.48
CCNL1-225ENST00000495471 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
CCNL1-225ENST00000495471 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
CCNL1-225ENST00000495471 SOX12O15370 315 aa11.99□□□□□ -0.49
CCNL1-225ENST00000495471 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
CCNL1-225ENST00000495471 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
CCNL1-225ENST00000495471 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
CCNL1-225ENST00000495471 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
CCNL1-225ENST00000495471 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.93□□□□□ -0.5
CCNL1-225ENST00000495471 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
CCNL1-225ENST00000495471 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
CCNL1-225ENST00000495471 C3orf67Q6ZVT6 689 aa11.91□□□□□ -0.5
CCNL1-225ENST00000495471 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
CCNL1-225ENST00000495471 NLRP6P59044 892 aa11.9□□□□□ -0.5
CCNL1-225ENST00000495471 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
CCNL1-225ENST00000495471 G3V3G9 751 aa11.88□□□□□ -0.51
CCNL1-225ENST00000495471 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
CCNL1-225ENST00000495471 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
CCNL1-225ENST00000495471 MICALL2Q8IY33 904 aa11.84□□□□□ -0.51
CCNL1-225ENST00000495471 LCE2DQ5TA82 110 aaPredicted RBP11.82□□□□□ -0.52
CCNL1-225ENST00000495471 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
CCNL1-225ENST00000495471 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
CCNL1-225ENST00000495471 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
CCNL1-225ENST00000495471 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
CCNL1-225ENST00000495471 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
CCNL1-225ENST00000495471 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
CCNL1-225ENST00000495471 TMEM92Q6UXU6 159 aa11.75□□□□□ -0.53
CCNL1-225ENST00000495471 PPP1R37O75864 691 aa11.74□□□□□ -0.53
CCNL1-225ENST00000495471 SNPHO15079 494 aa11.71□□□□□ -0.53
CCNL1-225ENST00000495471 ST18O60284 1047 aa11.71□□□□□ -0.53
CCNL1-225ENST00000495471 POTEMA6NI47 508 aa11.7□□□□□ -0.54
CCNL1-225ENST00000495471 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
CCNL1-225ENST00000495471 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
CCNL1-225ENST00000495471 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms