RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
SORT1-207ENST00000493736 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
SORT1-207ENST00000493736 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
SORT1-207ENST00000493736 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
SORT1-207ENST00000493736 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
SORT1-207ENST00000493736 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
SORT1-207ENST00000493736 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
SORT1-207ENST00000493736 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
SORT1-207ENST00000493736 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
SORT1-207ENST00000493736 GSE1Q14687 1217 aa13.51□□□□□ -0.25
SORT1-207ENST00000493736 MAP3K13O43283 966 aa13.48□□□□□ -0.25
SORT1-207ENST00000493736 CIZ1Q9ULV3 898 aaPredicted RBP13.44□□□□□ -0.26
SORT1-207ENST00000493736 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
SORT1-207ENST00000493736 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
SORT1-207ENST00000493736 PYGBP11216 843 aa13.43□□□□□ -0.26
SORT1-207ENST00000493736 SGIP1Q9BQI5 828 aa13.42□□□□□ -0.26
SORT1-207ENST00000493736 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
SORT1-207ENST00000493736 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
SORT1-207ENST00000493736 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
SORT1-207ENST00000493736 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
SORT1-207ENST00000493736 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
SORT1-207ENST00000493736 TIE1P35590 1138 aa13.31□□□□□ -0.28
SORT1-207ENST00000493736 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
SORT1-207ENST00000493736 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
SORT1-207ENST00000493736 PCDHB8Q9UN66 801 aa13.27□□□□□ -0.29
SORT1-207ENST00000493736 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
SORT1-207ENST00000493736 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
SORT1-207ENST00000493736 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
SORT1-207ENST00000493736 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
SORT1-207ENST00000493736 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
SORT1-207ENST00000493736 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
SORT1-207ENST00000493736 C7P10643 843 aa13.17□□□□□ -0.3
SORT1-207ENST00000493736 LHX8Q68G74 356 aa13.17□□□□□ -0.3
SORT1-207ENST00000493736 METRNQ9UJH8 293 aa13.17□□□□□ -0.3
SORT1-207ENST00000493736 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
SORT1-207ENST00000493736 PSEN1P49768 467 aa13.12□□□□□ -0.31
SORT1-207ENST00000493736 PDAP1Q13442 181 aaKnown RBP13.12□□□□□ -0.31
SORT1-207ENST00000493736 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
SORT1-207ENST00000493736 IER5LQ5T953 404 aa13.07□□□□□ -0.32
SORT1-207ENST00000493736 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
SORT1-207ENST00000493736 SEC24BO95487 1268 aa13.06□□□□□ -0.32
SORT1-207ENST00000493736 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
SORT1-207ENST00000493736 PKD2Q13563 968 aa13.04□□□□□ -0.32
SORT1-207ENST00000493736 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
SORT1-207ENST00000493736 POTEB2H3BUK9 544 aa13□□□□□ -0.33
SORT1-207ENST00000493736 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
SORT1-207ENST00000493736 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
SORT1-207ENST00000493736 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
SORT1-207ENST00000493736 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
SORT1-207ENST00000493736 PLCG2P16885 1265 aa12.98□□□□□ -0.33
SORT1-207ENST00000493736 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
SORT1-207ENST00000493736 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
SORT1-207ENST00000493736 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
SORT1-207ENST00000493736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
SORT1-207ENST00000493736 RGL2O15211 777 aa12.93□□□□□ -0.34
SORT1-207ENST00000493736 ZFP91Q96JP5 570 aaPredicted RBP12.93□□□□□ -0.34
SORT1-207ENST00000493736 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
SORT1-207ENST00000493736 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
SORT1-207ENST00000493736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.89□□□□□ -0.351e-11■□□□□ 8.6
SORT1-207ENST00000493736 POTEJP0CG39 1038 aa12.88□□□□□ -0.35
SORT1-207ENST00000493736 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
SORT1-207ENST00000493736 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
SORT1-207ENST00000493736 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
SORT1-207ENST00000493736 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
SORT1-207ENST00000493736 STK25O00506 426 aa12.83□□□□□ -0.36
SORT1-207ENST00000493736 STK24Q9Y6E0 443 aa12.83□□□□□ -0.36
SORT1-207ENST00000493736 PDCD7Q8N8D1 485 aaKnown RBP12.82□□□□□ -0.36
SORT1-207ENST00000493736 SOX12O15370 315 aa12.77□□□□□ -0.37
SORT1-207ENST00000493736 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
SORT1-207ENST00000493736 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
SORT1-207ENST00000493736 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
SORT1-207ENST00000493736 G3V3G9 751 aa12.72□□□□□ -0.37
SORT1-207ENST00000493736 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.37
SORT1-207ENST00000493736 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
SORT1-207ENST00000493736 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
SORT1-207ENST00000493736 NLRP6P59044 892 aa12.68□□□□□ -0.38
SORT1-207ENST00000493736 SLAIN1Q8ND83 568 aa12.68□□□□□ -0.38
SORT1-207ENST00000493736 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
SORT1-207ENST00000493736 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
SORT1-207ENST00000493736 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
SORT1-207ENST00000493736 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
SORT1-207ENST00000493736 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
SORT1-207ENST00000493736 MS4A4AQ96JQ5 239 aa12.63□□□□□ -0.39
SORT1-207ENST00000493736 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
SORT1-207ENST00000493736 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
SORT1-207ENST00000493736 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
SORT1-207ENST00000493736 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
SORT1-207ENST00000493736 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
SORT1-207ENST00000493736 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
SORT1-207ENST00000493736 SNPHO15079 494 aa12.49□□□□□ -0.41
SORT1-207ENST00000493736 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
SORT1-207ENST00000493736 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
SORT1-207ENST00000493736 RYDENQ9NUL5 291 aaKnown RBP12.44□□□□□ -0.42
SORT1-207ENST00000493736 PPP1R37O75864 691 aa12.43□□□□□ -0.42
SORT1-207ENST00000493736 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
SORT1-207ENST00000493736 LCE2DQ5TA82 110 aaPredicted RBP12.39□□□□□ -0.43
SORT1-207ENST00000493736 ST18O60284 1047 aa12.38□□□□□ -0.43
SORT1-207ENST00000493736 POTEMA6NI47 508 aa12.37□□□□□ -0.43
SORT1-207ENST00000493736 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
SORT1-207ENST00000493736 DOK7Q18PE1 504 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms