RNA–Protein interactions for RNA: ENST00000491816.1

PARP1-208, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 416 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-208ENST00000491816 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
PARP1-208ENST00000491816 RASEFQ8IZ41 740 aa16.1■□□□□ 0.17
PARP1-208ENST00000491816 PLCD3Q8N3E9 789 aa16.09■□□□□ 0.17
PARP1-208ENST00000491816 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
PARP1-208ENST00000491816 ATMINO43313 823 aaPredicted RBP16.06■□□□□ 0.16
PARP1-208ENST00000491816 ASTLQ6HA08 431 aaPredicted RBP16.06■□□□□ 0.16
PARP1-208ENST00000491816 OTUD5Q96G74 571 aa16.02■□□□□ 0.16
PARP1-208ENST00000491816 MAP3K13O43283 966 aa16■□□□□ 0.15
PARP1-208ENST00000491816 TRPC6Q9Y210 931 aa16■□□□□ 0.15
PARP1-208ENST00000491816 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
PARP1-208ENST00000491816 METRNQ9UJH8 293 aa15.97■□□□□ 0.15
PARP1-208ENST00000491816 NUBP1P53384 320 aa15.93■□□□□ 0.14
PARP1-208ENST00000491816 SLC39A7Q92504 469 aa15.93■□□□□ 0.14
PARP1-208ENST00000491816 C7P10643 843 aa15.91■□□□□ 0.14
PARP1-208ENST00000491816 BMP2KQ9NSY1 1161 aaPredicted RBP15.91■□□□□ 0.14
PARP1-208ENST00000491816 POTEJP0CG39 1038 aa15.89■□□□□ 0.13
PARP1-208ENST00000491816 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
PARP1-208ENST00000491816 TIE1P35590 1138 aa15.81■□□□□ 0.12
PARP1-208ENST00000491816 POTEFA5A3E0 1075 aa15.8■□□□□ 0.12
PARP1-208ENST00000491816 PCDHB13Q9Y5F0 798 aa15.79■□□□□ 0.12
PARP1-208ENST00000491816 TTLL13PA6NNM8 815 aa15.78■□□□□ 0.12
PARP1-208ENST00000491816 FAM212AQ96EL1 285 aa15.75■□□□□ 0.11
PARP1-208ENST00000491816 IFNL1Q8IU54 200 aa15.73■□□□□ 0.11
PARP1-208ENST00000491816 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
PARP1-208ENST00000491816 FBXO3Q9UK99 471 aa15.72■□□□□ 0.11
PARP1-208ENST00000491816 DCAF8Q5TAQ9 597 aa15.69■□□□□ 0.1
PARP1-208ENST00000491816 COLQQ9Y215 455 aaPredicted RBP15.69■□□□□ 0.1
PARP1-208ENST00000491816 TRIM35Q9UPQ4 493 aa15.68■□□□□ 0.1
PARP1-208ENST00000491816 MAMSTRQ6ZN01 415 aa15.66■□□□□ 0.1
PARP1-208ENST00000491816 PYGBP11216 843 aa15.63■□□□□ 0.09
PARP1-208ENST00000491816 SEC24BO95487 1268 aa15.62■□□□□ 0.09
PARP1-208ENST00000491816 TMEM106CQ9BVX2 250 aa15.61■□□□□ 0.09
PARP1-208ENST00000491816 VASPP50552 380 aaPredicted RBP15.6■□□□□ 0.09
PARP1-208ENST00000491816 SCUBE2Q9NQ36 999 aa15.6■□□□□ 0.09
PARP1-208ENST00000491816 POTEMA6NI47 508 aa15.58■□□□□ 0.08
PARP1-208ENST00000491816 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
PARP1-208ENST00000491816 IER5LQ5T953 404 aa15.55■□□□□ 0.08
PARP1-208ENST00000491816 POTEGQ6S5H5 508 aa15.55■□□□□ 0.08
PARP1-208ENST00000491816 PCDHB8Q9UN66 801 aa15.54■□□□□ 0.08
PARP1-208ENST00000491816 PLSCR2Q9NRY7 297 aa15.53■□□□□ 0.08
PARP1-208ENST00000491816 FAM163AQ96GL9 167 aaPredicted RBP15.51■□□□□ 0.07
PARP1-208ENST00000491816 LCE2DQ5TA82 110 aaPredicted RBP15.49■□□□□ 0.07
PARP1-208ENST00000491816 IRX5P78411 483 aaPredicted RBP15.43■□□□□ 0.06
PARP1-208ENST00000491816 PLCG2P16885 1265 aa15.42■□□□□ 0.06
PARP1-208ENST00000491816 GSE1Q14687 1217 aa15.42■□□□□ 0.06
PARP1-208ENST00000491816 IFNLR1Q8IU57 520 aaPredicted RBP15.36■□□□□ 0.05
PARP1-208ENST00000491816 SLAIN1Q8ND83 568 aa15.34■□□□□ 0.05
PARP1-208ENST00000491816 OCEL1Q9H607 264 aa15.33■□□□□ 0.04
PARP1-208ENST00000491816 CHRM1P11229 460 aaPredicted RBP15.31■□□□□ 0.04
PARP1-208ENST00000491816 ZNF467Q7Z7K2 595 aaPredicted RBP15.31■□□□□ 0.04
PARP1-208ENST00000491816 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
PARP1-208ENST00000491816 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
PARP1-208ENST00000491816 PSEN1P49768 467 aa15.24■□□□□ 0.03
PARP1-208ENST00000491816 PCDH10Q9P2E7 1040 aa15.22■□□□□ 0.03
PARP1-208ENST00000491816 PDCD7Q8N8D1 485 aaKnown RBP15.2■□□□□ 0.02
PARP1-208ENST00000491816 GOLGA2Q08379 1002 aa15.19■□□□□ 0.02
PARP1-208ENST00000491816 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
PARP1-208ENST00000491816 ST18O60284 1047 aa15.17■□□□□ 0.02
PARP1-208ENST00000491816 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.14■□□□□ 0.01
PARP1-208ENST00000491816 PDAP1Q13442 181 aaKnown RBP15.13■□□□□ 0.01
PARP1-208ENST00000491816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.01
PARP1-208ENST00000491816 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
PARP1-208ENST00000491816 CABP2Q9NPB3 220 aa15.07■□□□□ 0
PARP1-208ENST00000491816 DPY19L2Q6NUT2 758 aa15.06■□□□□ 0
PARP1-208ENST00000491816 L3MBTL3Q96JM7 780 aaPredicted RBP15.05■□□□□ -0
PARP1-208ENST00000491816 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
PARP1-208ENST00000491816 ILDR1Q86SU0 546 aaPredicted RBP15.02■□□□□ -0
PARP1-208ENST00000491816 SNPHO15079 494 aa14.98□□□□□ -0.01
PARP1-208ENST00000491816 MARVELD3Q96A59 401 aa14.95□□□□□ -0.02
PARP1-208ENST00000491816 TMEM121BQ9BXQ6 578 aaPredicted RBP14.92□□□□□ -0.02
PARP1-208ENST00000491816 EFCAB3Q8N7B9 438 aa14.9□□□□□ -0.02
PARP1-208ENST00000491816 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
PARP1-208ENST00000491816 BOLA1Q9Y3E2 137 aa14.89□□□□□ -0.03
PARP1-208ENST00000491816 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
PARP1-208ENST00000491816 G3V3G9 751 aa14.84□□□□□ -0.03
PARP1-208ENST00000491816 RIOK3O14730 519 aaKnown RBP14.8□□□□□ -0.04
PARP1-208ENST00000491816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.78□□□□□ -0.04
PARP1-208ENST00000491816 EMP3P54852 163 aa14.78□□□□□ -0.04
PARP1-208ENST00000491816 ZFP91Q96JP5 570 aaPredicted RBP14.78□□□□□ -0.04
PARP1-208ENST00000491816 POTEB3A0JP26 581 aa14.76□□□□□ -0.05
PARP1-208ENST00000491816 POTEBQ6S5H4 581 aa14.76□□□□□ -0.05
PARP1-208ENST00000491816 HOXB3P14651 431 aaPredicted RBP14.74□□□□□ -0.05
PARP1-208ENST00000491816 FAM205CA6NFA0 338 aa14.72□□□□□ -0.05
PARP1-208ENST00000491816 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
PARP1-208ENST00000491816 SPNS2Q8IVW8 549 aa14.7□□□□□ -0.06
PARP1-208ENST00000491816 MS4A4AQ96JQ5 239 aa14.7□□□□□ -0.06
PARP1-208ENST00000491816 HS3ST6Q96QI5 342 aa14.7□□□□□ -0.06
PARP1-208ENST00000491816 PHF8Q9UPP1 1060 aa14.69□□□□□ -0.06
PARP1-208ENST00000491816 SOX12O15370 315 aa14.68□□□□□ -0.06
PARP1-208ENST00000491816 MICALL2Q8IY33 904 aa14.68□□□□□ -0.06
PARP1-208ENST00000491816 TMEM92Q6UXU6 159 aa14.67□□□□□ -0.06
PARP1-208ENST00000491816 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
PARP1-208ENST00000491816 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
PARP1-208ENST00000491816 KRTAP3-3Q9BYR6 98 aa14.62□□□□□ -0.07
PARP1-208ENST00000491816 KRTAP3-2Q9BYR7 98 aa14.62□□□□□ -0.07
PARP1-208ENST00000491816 HOXB1P14653 301 aaPredicted RBP14.59□□□□□ -0.07
PARP1-208ENST00000491816 DOK7Q18PE1 504 aa14.59□□□□□ -0.07
PARP1-208ENST00000491816 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
PARP1-208ENST00000491816 STK24Q9Y6E0 443 aa14.56□□□□□ -0.08
PARP1-208ENST00000491816 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms