RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
ITGA4-211ENST00000490435 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
ITGA4-211ENST00000490435 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
ITGA4-211ENST00000490435 KIF12Q96FN5 646 aa16.05■□□□□ 0.16
ITGA4-211ENST00000490435 ASTLQ6HA08 431 aaPredicted RBP16.04■□□□□ 0.16
ITGA4-211ENST00000490435 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
ITGA4-211ENST00000490435 ATMINO43313 823 aaPredicted RBP16.01■□□□□ 0.15
ITGA4-211ENST00000490435 FBXO3Q9UK99 471 aa15.97■□□□□ 0.15
ITGA4-211ENST00000490435 MAP3K13O43283 966 aa15.96■□□□□ 0.15
ITGA4-211ENST00000490435 SLC39A7Q92504 469 aa15.96■□□□□ 0.15
ITGA4-211ENST00000490435 C7P10643 843 aa15.94■□□□□ 0.14
ITGA4-211ENST00000490435 NUBP1P53384 320 aa15.94■□□□□ 0.14
ITGA4-211ENST00000490435 METRNQ9UJH8 293 aa15.93■□□□□ 0.14
ITGA4-211ENST00000490435 POTEB2H3BUK9 544 aa15.92■□□□□ 0.14
ITGA4-211ENST00000490435 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
ITGA4-211ENST00000490435 FAM212AQ96EL1 285 aa15.88■□□□□ 0.13
ITGA4-211ENST00000490435 OTUD5Q96G74 571 aa15.88■□□□□ 0.13
ITGA4-211ENST00000490435 TIE1P35590 1138 aa15.86■□□□□ 0.13
ITGA4-211ENST00000490435 SGIP1Q9BQI5 828 aa15.86■□□□□ 0.13
ITGA4-211ENST00000490435 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
ITGA4-211ENST00000490435 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
ITGA4-211ENST00000490435 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
ITGA4-211ENST00000490435 TTLL13PA6NNM8 815 aa15.75■□□□□ 0.11
ITGA4-211ENST00000490435 VASPP50552 380 aaPredicted RBP15.73■□□□□ 0.11
ITGA4-211ENST00000490435 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
ITGA4-211ENST00000490435 MAMSTRQ6ZN01 415 aa15.73■□□□□ 0.11
ITGA4-211ENST00000490435 IFNL1Q8IU54 200 aa15.71■□□□□ 0.11
ITGA4-211ENST00000490435 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
ITGA4-211ENST00000490435 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
ITGA4-211ENST00000490435 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
ITGA4-211ENST00000490435 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
ITGA4-211ENST00000490435 SEC24BO95487 1268 aa15.65■□□□□ 0.1
ITGA4-211ENST00000490435 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
ITGA4-211ENST00000490435 IER5LQ5T953 404 aa15.63■□□□□ 0.09
ITGA4-211ENST00000490435 POTEMA6NI47 508 aa15.62■□□□□ 0.09
ITGA4-211ENST00000490435 PYGBP11216 843 aa15.62■□□□□ 0.09
ITGA4-211ENST00000490435 TMEM106CQ9BVX2 250 aa15.62■□□□□ 0.09
ITGA4-211ENST00000490435 COLQQ9Y215 455 aaPredicted RBP15.6■□□□□ 0.09
ITGA4-211ENST00000490435 GSE1Q14687 1217 aa15.58■□□□□ 0.08
ITGA4-211ENST00000490435 POTEGQ6S5H5 508 aa15.53■□□□□ 0.08
ITGA4-211ENST00000490435 PCDHB8Q9UN66 801 aa15.51■□□□□ 0.07
ITGA4-211ENST00000490435 PLCG2P16885 1265 aa15.46■□□□□ 0.07
ITGA4-211ENST00000490435 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
ITGA4-211ENST00000490435 ZNF467Q7Z7K2 595 aaPredicted RBP15.44■□□□□ 0.06
ITGA4-211ENST00000490435 PCDH10Q9P2E7 1040 aa15.44■□□□□ 0.06
ITGA4-211ENST00000490435 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
ITGA4-211ENST00000490435 SPOCK2Q92563 424 aa15.42■□□□□ 0.06
ITGA4-211ENST00000490435 IRX5P78411 483 aaPredicted RBP15.41■□□□□ 0.06
ITGA4-211ENST00000490435 FAM163AQ96GL9 167 aaPredicted RBP15.38■□□□□ 0.05
ITGA4-211ENST00000490435 OCEL1Q9H607 264 aa15.37■□□□□ 0.05
ITGA4-211ENST00000490435 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.04
ITGA4-211ENST00000490435 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
ITGA4-211ENST00000490435 LCE2DQ5TA82 110 aaPredicted RBP15.3■□□□□ 0.04
ITGA4-211ENST00000490435 SLAIN1Q8ND83 568 aa15.3■□□□□ 0.04
ITGA4-211ENST00000490435 PSEN1P49768 467 aa15.28■□□□□ 0.04
ITGA4-211ENST00000490435 MKRN3Q13064 507 aaKnown RBP15.26■□□□□ 0.03
ITGA4-211ENST00000490435 PDAP1Q13442 181 aaKnown RBP15.24■□□□□ 0.03
ITGA4-211ENST00000490435 PDCD7Q8N8D1 485 aaKnown RBP15.18■□□□□ 0.02
ITGA4-211ENST00000490435 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
ITGA4-211ENST00000490435 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
ITGA4-211ENST00000490435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
ITGA4-211ENST00000490435 L3MBTL3Q96JM7 780 aaPredicted RBP15.14■□□□□ 0.01
ITGA4-211ENST00000490435 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
ITGA4-211ENST00000490435 CABP2Q9NPB3 220 aa15.1■□□□□ 0.01
ITGA4-211ENST00000490435 ST18O60284 1047 aa15.09■□□□□ 0.01
ITGA4-211ENST00000490435 SNPHO15079 494 aa15.07■□□□□ 0
ITGA4-211ENST00000490435 ILDR1Q86SU0 546 aaPredicted RBP15.05■□□□□ -0
ITGA4-211ENST00000490435 TMEM121BQ9BXQ6 578 aaPredicted RBP14.98□□□□□ -0.01
ITGA4-211ENST00000490435 G3V3G9 751 aa14.97□□□□□ -0.01
ITGA4-211ENST00000490435 DPY19L2Q6NUT2 758 aa14.97□□□□□ -0.01
ITGA4-211ENST00000490435 CDAN1Q8IWY9 1227 aa14.97□□□□□ -0.01
ITGA4-211ENST00000490435 RIOK3O14730 519 aaKnown RBP14.93□□□□□ -0.02
ITGA4-211ENST00000490435 BOLA1Q9Y3E2 137 aa14.93□□□□□ -0.02
ITGA4-211ENST00000490435 EFCAB3Q8N7B9 438 aa14.91□□□□□ -0.02
ITGA4-211ENST00000490435 RNF25Q96BH1 459 aaPredicted RBP14.88□□□□□ -0.03
ITGA4-211ENST00000490435 VGFO15240 615 aaPredicted RBP14.86□□□□□ -0.03
ITGA4-211ENST00000490435 MARVELD3Q96A59 401 aa14.84□□□□□ -0.03
ITGA4-211ENST00000490435 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.04
ITGA4-211ENST00000490435 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
ITGA4-211ENST00000490435 SOX12O15370 315 aa14.81□□□□□ -0.04
ITGA4-211ENST00000490435 TAOK2Q9UL54 1235 aa14.77□□□□□ -0.05
ITGA4-211ENST00000490435 EMP3P54852 163 aa14.76□□□□□ -0.05
ITGA4-211ENST00000490435 MICALL2Q8IY33 904 aa14.71□□□□□ -0.05
ITGA4-211ENST00000490435 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
ITGA4-211ENST00000490435 HOXB3P14651 431 aaPredicted RBP14.69□□□□□ -0.06
ITGA4-211ENST00000490435 MS4A4AQ96JQ5 239 aa14.68□□□□□ -0.06
ITGA4-211ENST00000490435 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
ITGA4-211ENST00000490435 ZNF710Q8N1W2 664 aa14.67□□□□□ -0.06
ITGA4-211ENST00000490435 BCL11BQ9C0K0 894 aaPredicted RBP14.66□□□□□ -0.06
ITGA4-211ENST00000490435 FAM205CA6NFA0 338 aa14.65□□□□□ -0.06
ITGA4-211ENST00000490435 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
ITGA4-211ENST00000490435 NLRP6P59044 892 aa14.64□□□□□ -0.07
ITGA4-211ENST00000490435 HS3ST6Q96QI5 342 aa14.63□□□□□ -0.07
ITGA4-211ENST00000490435 STK24Q9Y6E0 443 aa14.63□□□□□ -0.07
ITGA4-211ENST00000490435 RIMBP2O15034 1052 aa14.6□□□□□ -0.07
ITGA4-211ENST00000490435 HOXB1P14653 301 aaPredicted RBP14.6□□□□□ -0.07
ITGA4-211ENST00000490435 SPNS2Q8IVW8 549 aa14.6□□□□□ -0.07
ITGA4-211ENST00000490435 STK25O00506 426 aa14.59□□□□□ -0.07
ITGA4-211ENST00000490435 TMEM92Q6UXU6 159 aa14.59□□□□□ -0.07
ITGA4-211ENST00000490435 POTEB3A0JP26 581 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms