RNA–Protein interactions for RNA: ENST00000489977.5

SKAP2-206, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 5

Gene SKAP2, Length 679 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-206ENST00000489977 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
SKAP2-206ENST00000489977 NUBP1P53384 320 aa13.71□□□□□ -0.21
SKAP2-206ENST00000489977 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
SKAP2-206ENST00000489977 LHX8Q68G74 356 aa13.69□□□□□ -0.22
SKAP2-206ENST00000489977 KIF12Q96FN5 646 aa13.68□□□□□ -0.22
SKAP2-206ENST00000489977 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
SKAP2-206ENST00000489977 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
SKAP2-206ENST00000489977 MAP3K13O43283 966 aa13.61□□□□□ -0.23
SKAP2-206ENST00000489977 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
SKAP2-206ENST00000489977 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
SKAP2-206ENST00000489977 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
SKAP2-206ENST00000489977 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
SKAP2-206ENST00000489977 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
SKAP2-206ENST00000489977 ATN1P54259 1190 aaPredicted RBP13.49□□□□□ -0.25
SKAP2-206ENST00000489977 BMP2KQ9NSY1 1161 aaPredicted RBP13.49□□□□□ -0.25
SKAP2-206ENST00000489977 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
SKAP2-206ENST00000489977 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
SKAP2-206ENST00000489977 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
SKAP2-206ENST00000489977 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
SKAP2-206ENST00000489977 TIE1P35590 1138 aa13.45□□□□□ -0.26
SKAP2-206ENST00000489977 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
SKAP2-206ENST00000489977 IFNLR1Q8IU57 520 aaPredicted RBP13.43□□□□□ -0.26
SKAP2-206ENST00000489977 SLC39A7Q92504 469 aa13.42□□□□□ -0.26
SKAP2-206ENST00000489977 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
SKAP2-206ENST00000489977 C7P10643 843 aa13.41□□□□□ -0.26
SKAP2-206ENST00000489977 PYGBP11216 843 aa13.4□□□□□ -0.26
SKAP2-206ENST00000489977 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
SKAP2-206ENST00000489977 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
SKAP2-206ENST00000489977 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
SKAP2-206ENST00000489977 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
SKAP2-206ENST00000489977 GSE1Q14687 1217 aa13.33□□□□□ -0.28
SKAP2-206ENST00000489977 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
SKAP2-206ENST00000489977 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
SKAP2-206ENST00000489977 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
SKAP2-206ENST00000489977 TMEM106CQ9BVX2 250 aa13.28□□□□□ -0.28
SKAP2-206ENST00000489977 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
SKAP2-206ENST00000489977 COLQQ9Y215 455 aaPredicted RBP13.25□□□□□ -0.29
SKAP2-206ENST00000489977 IER5LQ5T953 404 aa13.21□□□□□ -0.29
SKAP2-206ENST00000489977 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
SKAP2-206ENST00000489977 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
SKAP2-206ENST00000489977 SEC24BO95487 1268 aa13.16□□□□□ -0.3
SKAP2-206ENST00000489977 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
SKAP2-206ENST00000489977 IRX5P78411 483 aaPredicted RBP13.12□□□□□ -0.31
SKAP2-206ENST00000489977 PSEN1P49768 467 aa13.08□□□□□ -0.32
SKAP2-206ENST00000489977 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
SKAP2-206ENST00000489977 PLCG2P16885 1265 aa13.05□□□□□ -0.32
SKAP2-206ENST00000489977 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
SKAP2-206ENST00000489977 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
SKAP2-206ENST00000489977 TRIM41Q8WV44 630 aa13□□□□□ -0.33
SKAP2-206ENST00000489977 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
SKAP2-206ENST00000489977 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
SKAP2-206ENST00000489977 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
SKAP2-206ENST00000489977 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
SKAP2-206ENST00000489977 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
SKAP2-206ENST00000489977 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
SKAP2-206ENST00000489977 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
SKAP2-206ENST00000489977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.34
SKAP2-206ENST00000489977 SLAIN1Q8ND83 568 aa12.89□□□□□ -0.35
SKAP2-206ENST00000489977 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
SKAP2-206ENST00000489977 POTEMA6NI47 508 aa12.86□□□□□ -0.35
SKAP2-206ENST00000489977 RIOK3O14730 519 aaKnown RBP12.85□□□□□ -0.35
SKAP2-206ENST00000489977 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
SKAP2-206ENST00000489977 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
SKAP2-206ENST00000489977 EFCAB3Q8N7B9 438 aa12.82□□□□□ -0.36
SKAP2-206ENST00000489977 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
SKAP2-206ENST00000489977 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
SKAP2-206ENST00000489977 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
SKAP2-206ENST00000489977 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
SKAP2-206ENST00000489977 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
SKAP2-206ENST00000489977 PKD2Q13563 968 aa12.76□□□□□ -0.37
SKAP2-206ENST00000489977 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
SKAP2-206ENST00000489977 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
SKAP2-206ENST00000489977 ST18O60284 1047 aa12.71□□□□□ -0.37
SKAP2-206ENST00000489977 BOLA1Q9Y3E2 137 aa12.7□□□□□ -0.38
SKAP2-206ENST00000489977 SOX12O15370 315 aa12.69□□□□□ -0.38
SKAP2-206ENST00000489977 RGL2O15211 777 aa12.67□□□□□ -0.38
SKAP2-206ENST00000489977 MS4A4AQ96JQ5 239 aa12.67□□□□□ -0.38
SKAP2-206ENST00000489977 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
SKAP2-206ENST00000489977 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
SKAP2-206ENST00000489977 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
SKAP2-206ENST00000489977 SNPHO15079 494 aa12.63□□□□□ -0.39
SKAP2-206ENST00000489977 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
SKAP2-206ENST00000489977 G3V3G9 751 aa12.61□□□□□ -0.39
SKAP2-206ENST00000489977 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
SKAP2-206ENST00000489977 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
SKAP2-206ENST00000489977 STK25O00506 426 aa12.58□□□□□ -0.4
SKAP2-206ENST00000489977 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
SKAP2-206ENST00000489977 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
SKAP2-206ENST00000489977 FBXO22Q8NEZ5 403 aa12.57□□□□□ -0.4
SKAP2-206ENST00000489977 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
SKAP2-206ENST00000489977 NLRP6P59044 892 aa12.54□□□□□ -0.4
SKAP2-206ENST00000489977 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
SKAP2-206ENST00000489977 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
SKAP2-206ENST00000489977 CDAN1Q8IWY9 1227 aa12.52□□□□□ -0.41
SKAP2-206ENST00000489977 MARVELD3Q96A59 401 aa12.51□□□□□ -0.41
SKAP2-206ENST00000489977 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
SKAP2-206ENST00000489977 EMP3P54852 163 aa12.4□□□□□ -0.42
SKAP2-206ENST00000489977 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
SKAP2-206ENST00000489977 DOK7Q18PE1 504 aa12.38□□□□□ -0.43
SKAP2-206ENST00000489977 HOXB1P14653 301 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms