RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 TSPYL2Q9H2G4 693 aaPredicted RBP15.77■□□□□ 0.12
HNRNPU-211ENST00000489705 CCDC61Q9Y6R9 512 aa15.76■□□□□ 0.11
HNRNPU-211ENST00000489705 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
HNRNPU-211ENST00000489705 GSE1Q14687 1217 aa15.68■□□□□ 0.1
HNRNPU-211ENST00000489705 PHF12Q96QT6 1004 aa15.67■□□□□ 0.1
HNRNPU-211ENST00000489705 SGIP1Q9BQI5 828 aa15.63■□□□□ 0.09
HNRNPU-211ENST00000489705 DCAF8Q5TAQ9 597 aa15.62■□□□□ 0.09
HNRNPU-211ENST00000489705 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
HNRNPU-211ENST00000489705 GALR2O43603 387 aaPredicted RBP15.56■□□□□ 0.08
HNRNPU-211ENST00000489705 MS4A3Q96HJ5 214 aa15.53■□□□□ 0.08
HNRNPU-211ENST00000489705 DCBLD2Q96PD2 775 aa15.53■□□□□ 0.08
HNRNPU-211ENST00000489705 MAP3K13O43283 966 aa15.51■□□□□ 0.07
HNRNPU-211ENST00000489705 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
HNRNPU-211ENST00000489705 CHRM1P11229 460 aaPredicted RBP15.5■□□□□ 0.07
HNRNPU-211ENST00000489705 PCDHB13Q9Y5F0 798 aa15.47■□□□□ 0.07
HNRNPU-211ENST00000489705 CIZ1Q9ULV3 898 aaPredicted RBP15.45■□□□□ 0.06
HNRNPU-211ENST00000489705 PYGBP11216 843 aa15.42■□□□□ 0.06
HNRNPU-211ENST00000489705 TIE1P35590 1138 aa15.41■□□□□ 0.06
HNRNPU-211ENST00000489705 ZNF467Q7Z7K2 595 aaPredicted RBP15.4■□□□□ 0.06
HNRNPU-211ENST00000489705 POTEIP0CG38 1075 aa15.39■□□□□ 0.05
HNRNPU-211ENST00000489705 ASTLQ6HA08 431 aaPredicted RBP15.39■□□□□ 0.05
HNRNPU-211ENST00000489705 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
HNRNPU-211ENST00000489705 ATMINO43313 823 aaPredicted RBP15.32■□□□□ 0.04
HNRNPU-211ENST00000489705 BMP2KQ9NSY1 1161 aaPredicted RBP15.29■□□□□ 0.04
HNRNPU-211ENST00000489705 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
HNRNPU-211ENST00000489705 SLC39A7Q92504 469 aa15.25■□□□□ 0.03
HNRNPU-211ENST00000489705 TRPC6Q9Y210 931 aa15.25■□□□□ 0.03
HNRNPU-211ENST00000489705 ATN1P54259 1190 aaPredicted RBP15.22■□□□□ 0.03
HNRNPU-211ENST00000489705 PCDHB8Q9UN66 801 aa15.22■□□□□ 0.03
HNRNPU-211ENST00000489705 C7P10643 843 aa15.21■□□□□ 0.03
HNRNPU-211ENST00000489705 TMEM106CQ9BVX2 250 aa15.2■□□□□ 0.02
HNRNPU-211ENST00000489705 PDAP1Q13442 181 aaKnown RBP15.19■□□□□ 0.02
HNRNPU-211ENST00000489705 IER5LQ5T953 404 aa15.18■□□□□ 0.02
HNRNPU-211ENST00000489705 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
HNRNPU-211ENST00000489705 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
HNRNPU-211ENST00000489705 TRIM35Q9UPQ4 493 aa15.15■□□□□ 0.02
HNRNPU-211ENST00000489705 PSEN1P49768 467 aa15.13■□□□□ 0.01
HNRNPU-211ENST00000489705 METRNQ9UJH8 293 aa15.13■□□□□ 0.01
HNRNPU-211ENST00000489705 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
HNRNPU-211ENST00000489705 PKD2Q13563 968 aa15.12■□□□□ 0.01
HNRNPU-211ENST00000489705 ECM2O94769 699 aaPredicted RBP15.11■□□□□ 0.01
HNRNPU-211ENST00000489705 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
HNRNPU-211ENST00000489705 LHX8Q68G74 356 aa15.07■□□□□ 0
HNRNPU-211ENST00000489705 RNF25Q96BH1 459 aaPredicted RBP15.06■□□□□ 0
HNRNPU-211ENST00000489705 GOLGA2Q08379 1002 aa15.04■□□□□ -0
HNRNPU-211ENST00000489705 SEC24BO95487 1268 aa15□□□□□ -0.01
HNRNPU-211ENST00000489705 MKRN3Q13064 507 aaKnown RBP14.98□□□□□ -0.01
HNRNPU-211ENST00000489705 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
HNRNPU-211ENST00000489705 PLCG2P16885 1265 aa14.94□□□□□ -0.02
HNRNPU-211ENST00000489705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.93□□□□□ -0.02
HNRNPU-211ENST00000489705 ZFP91Q96JP5 570 aaPredicted RBP14.93□□□□□ -0.02
HNRNPU-211ENST00000489705 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
HNRNPU-211ENST00000489705 POTEFA5A3E0 1075 aa14.92□□□□□ -0.02
HNRNPU-211ENST00000489705 RGL2O15211 777 aa14.92□□□□□ -0.02
HNRNPU-211ENST00000489705 MAMSTRQ6ZN01 415 aa14.92□□□□□ -0.02
HNRNPU-211ENST00000489705 CABP2Q9NPB3 220 aa14.92□□□□□ -0.02
HNRNPU-211ENST00000489705 COLQQ9Y215 455 aaPredicted RBP14.89□□□□□ -0.03
HNRNPU-211ENST00000489705 POTEB2H3BUK9 544 aa14.87□□□□□ -0.03
HNRNPU-211ENST00000489705 ILDR1Q86SU0 546 aaPredicted RBP14.86□□□□□ -0.03
HNRNPU-211ENST00000489705 SOX12O15370 315 aa14.83□□□□□ -0.04
HNRNPU-211ENST00000489705 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
HNRNPU-211ENST00000489705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.83□□□□□ -0.042e-10■□□□□ 10.5
HNRNPU-211ENST00000489705 BCL11BQ9C0K0 894 aaPredicted RBP14.82□□□□□ -0.04
HNRNPU-211ENST00000489705 SCUBE2Q9NQ36 999 aa14.82□□□□□ -0.04
HNRNPU-211ENST00000489705 STK25O00506 426 aa14.81□□□□□ -0.04
HNRNPU-211ENST00000489705 PDCD7Q8N8D1 485 aaKnown RBP14.8□□□□□ -0.04
HNRNPU-211ENST00000489705 EFCAB3Q8N7B9 438 aa14.79□□□□□ -0.04
HNRNPU-211ENST00000489705 STK24Q9Y6E0 443 aa14.78□□□□□ -0.04
HNRNPU-211ENST00000489705 L3MBTL3Q96JM7 780 aaPredicted RBP14.77□□□□□ -0.05
HNRNPU-211ENST00000489705 OTUD5Q96G74 571 aa14.76□□□□□ -0.05
HNRNPU-211ENST00000489705 POTEJP0CG39 1038 aa14.74□□□□□ -0.05
HNRNPU-211ENST00000489705 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
HNRNPU-211ENST00000489705 NLRP6P59044 892 aa14.69□□□□□ -0.06
HNRNPU-211ENST00000489705 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
HNRNPU-211ENST00000489705 G3V3G9 751 aa14.66□□□□□ -0.06
HNRNPU-211ENST00000489705 PHF8Q9UPP1 1060 aa14.63□□□□□ -0.07
HNRNPU-211ENST00000489705 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
HNRNPU-211ENST00000489705 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.62□□□□□ -0.07
HNRNPU-211ENST00000489705 BOLA1Q9Y3E2 137 aa14.62□□□□□ -0.07
HNRNPU-211ENST00000489705 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
HNRNPU-211ENST00000489705 FBXO22Q8NEZ5 403 aa14.6□□□□□ -0.07
HNRNPU-211ENST00000489705 MFRPQ9BY79 579 aa14.6□□□□□ -0.07
HNRNPU-211ENST00000489705 RYDENQ9NUL5 291 aaKnown RBP14.58□□□□□ -0.08
HNRNPU-211ENST00000489705 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
HNRNPU-211ENST00000489705 MS4A4AQ96JQ5 239 aa14.57□□□□□ -0.08
HNRNPU-211ENST00000489705 TMEM121BQ9BXQ6 578 aaPredicted RBP14.57□□□□□ -0.08
HNRNPU-211ENST00000489705 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
HNRNPU-211ENST00000489705 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
HNRNPU-211ENST00000489705 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
HNRNPU-211ENST00000489705 MICALL2Q8IY33 904 aa14.5□□□□□ -0.09
HNRNPU-211ENST00000489705 SNPHO15079 494 aa14.45□□□□□ -0.1
HNRNPU-211ENST00000489705 NKX1-1Q15270 411 aaPredicted RBP14.4□□□□□ -0.1
HNRNPU-211ENST00000489705 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.12
HNRNPU-211ENST00000489705 PPP1R37O75864 691 aa14.29□□□□□ -0.12
HNRNPU-211ENST00000489705 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
HNRNPU-211ENST00000489705 TMEM92Q6UXU6 159 aa14.26□□□□□ -0.13
HNRNPU-211ENST00000489705 FAM163AQ96GL9 167 aaPredicted RBP14.25□□□□□ -0.13
HNRNPU-211ENST00000489705 DOK7Q18PE1 504 aa14.24□□□□□ -0.13
HNRNPU-211ENST00000489705 KIF3CO14782 793 aa14.23□□□□□ -0.13
HNRNPU-211ENST00000489705 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms