RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 CCDC61Q9Y6R9 512 aa10.46□□□□□ -0.73
NEK2-204ENST00000489633 NUBP1P53384 320 aa10.4□□□□□ -0.74
NEK2-204ENST00000489633 KIF12Q96FN5 646 aa10.4□□□□□ -0.74
NEK2-204ENST00000489633 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
NEK2-204ENST00000489633 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
NEK2-204ENST00000489633 PELP1Q8IZL8 1130 aaKnown RBP10.37□□□□□ -0.75
NEK2-204ENST00000489633 MAP3K13O43283 966 aa10.36□□□□□ -0.75
NEK2-204ENST00000489633 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
NEK2-204ENST00000489633 TRPC6Q9Y210 931 aa10.33□□□□□ -0.76
NEK2-204ENST00000489633 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
NEK2-204ENST00000489633 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
NEK2-204ENST00000489633 FAM212AQ96EL1 285 aa10.3□□□□□ -0.76
NEK2-204ENST00000489633 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
NEK2-204ENST00000489633 ATN1P54259 1190 aaPredicted RBP10.28□□□□□ -0.76
NEK2-204ENST00000489633 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
NEK2-204ENST00000489633 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
NEK2-204ENST00000489633 DCAF8Q5TAQ9 597 aa10.26□□□□□ -0.77
NEK2-204ENST00000489633 METRNQ9UJH8 293 aa10.26□□□□□ -0.77
NEK2-204ENST00000489633 PCDHB13Q9Y5F0 798 aa10.26□□□□□ -0.77
NEK2-204ENST00000489633 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
NEK2-204ENST00000489633 TIE1P35590 1138 aa10.22□□□□□ -0.77
NEK2-204ENST00000489633 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
NEK2-204ENST00000489633 C7P10643 843 aa10.21□□□□□ -0.77
NEK2-204ENST00000489633 PYGBP11216 843 aa10.21□□□□□ -0.77
NEK2-204ENST00000489633 SGIP1Q9BQI5 828 aa10.21□□□□□ -0.77
NEK2-204ENST00000489633 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
NEK2-204ENST00000489633 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
NEK2-204ENST00000489633 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
NEK2-204ENST00000489633 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
NEK2-204ENST00000489633 POTEFA5A3E0 1075 aa10.14□□□□□ -0.79
NEK2-204ENST00000489633 TRIM35Q9UPQ4 493 aa10.14□□□□□ -0.79
NEK2-204ENST00000489633 GSE1Q14687 1217 aa10.12□□□□□ -0.79
NEK2-204ENST00000489633 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
NEK2-204ENST00000489633 PCDHB8Q9UN66 801 aa10.12□□□□□ -0.79
NEK2-204ENST00000489633 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
NEK2-204ENST00000489633 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
NEK2-204ENST00000489633 SEC24BO95487 1268 aa10.07□□□□□ -0.8
NEK2-204ENST00000489633 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
NEK2-204ENST00000489633 IER5LQ5T953 404 aa10.04□□□□□ -0.8
NEK2-204ENST00000489633 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.81
NEK2-204ENST00000489633 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
NEK2-204ENST00000489633 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
NEK2-204ENST00000489633 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
NEK2-204ENST00000489633 PLCG2P16885 1265 aa9.97□□□□□ -0.81
NEK2-204ENST00000489633 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
NEK2-204ENST00000489633 PSEN1P49768 467 aa9.95□□□□□ -0.82
NEK2-204ENST00000489633 OCEL1Q9H607 264 aa9.92□□□□□ -0.82
NEK2-204ENST00000489633 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
NEK2-204ENST00000489633 PDAP1Q13442 181 aaKnown RBP9.89□□□□□ -0.83
NEK2-204ENST00000489633 MKRN3Q13064 507 aaKnown RBP9.88□□□□□ -0.83
NEK2-204ENST00000489633 FAM163AQ96GL9 167 aaPredicted RBP9.87□□□□□ -0.83
NEK2-204ENST00000489633 POTEMA6NI47 508 aa9.86□□□□□ -0.83
NEK2-204ENST00000489633 LCE2DQ5TA82 110 aaPredicted RBP9.85□□□□□ -0.83
NEK2-204ENST00000489633 POTEGQ6S5H5 508 aa9.85□□□□□ -0.83
NEK2-204ENST00000489633 SLAIN1Q8ND83 568 aa9.85□□□□□ -0.83
NEK2-204ENST00000489633 PDCD7Q8N8D1 485 aaKnown RBP9.84□□□□□ -0.83
NEK2-204ENST00000489633 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
NEK2-204ENST00000489633 TRIM41Q8WV44 630 aa9.83□□□□□ -0.84
NEK2-204ENST00000489633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.841e-6■■■■□ 25.6
NEK2-204ENST00000489633 RNF25Q96BH1 459 aaPredicted RBP9.79□□□□□ -0.84
NEK2-204ENST00000489633 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
NEK2-204ENST00000489633 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
NEK2-204ENST00000489633 RIOK3O14730 519 aaKnown RBP9.75□□□□□ -0.85
NEK2-204ENST00000489633 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
NEK2-204ENST00000489633 EFCAB3Q8N7B9 438 aa9.74□□□□□ -0.85
NEK2-204ENST00000489633 L3MBTL3Q96JM7 780 aaPredicted RBP9.74□□□□□ -0.85
NEK2-204ENST00000489633 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
NEK2-204ENST00000489633 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
NEK2-204ENST00000489633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
NEK2-204ENST00000489633 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
NEK2-204ENST00000489633 VGFO15240 615 aaPredicted RBP9.7□□□□□ -0.86
NEK2-204ENST00000489633 ST18O60284 1047 aa9.7□□□□□ -0.86
NEK2-204ENST00000489633 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
NEK2-204ENST00000489633 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
NEK2-204ENST00000489633 G3V3G9 751 aa9.65□□□□□ -0.86
NEK2-204ENST00000489633 PKD2Q13563 968 aa9.63□□□□□ -0.87
NEK2-204ENST00000489633 SNPHO15079 494 aa9.62□□□□□ -0.87
NEK2-204ENST00000489633 PCDH10Q9P2E7 1040 aa9.62□□□□□ -0.87
NEK2-204ENST00000489633 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
NEK2-204ENST00000489633 MS4A4AQ96JQ5 239 aa9.61□□□□□ -0.87
NEK2-204ENST00000489633 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
NEK2-204ENST00000489633 SOX12O15370 315 aa9.6□□□□□ -0.87
NEK2-204ENST00000489633 RGL2O15211 777 aa9.59□□□□□ -0.87
NEK2-204ENST00000489633 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
NEK2-204ENST00000489633 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
NEK2-204ENST00000489633 STK24Q9Y6E0 443 aa9.59□□□□□ -0.87
NEK2-204ENST00000489633 CDAN1Q8IWY9 1227 aa9.58□□□□□ -0.88
NEK2-204ENST00000489633 TAOK2Q9UL54 1235 aa9.57□□□□□ -0.88
NEK2-204ENST00000489633 STK25O00506 426 aa9.56□□□□□ -0.88
NEK2-204ENST00000489633 MICALL2Q8IY33 904 aa9.56□□□□□ -0.88
NEK2-204ENST00000489633 TMEM92Q6UXU6 159 aa9.53□□□□□ -0.88
NEK2-204ENST00000489633 NLRP6P59044 892 aa9.52□□□□□ -0.89
NEK2-204ENST00000489633 FBXO22Q8NEZ5 403 aa9.52□□□□□ -0.89
NEK2-204ENST00000489633 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
NEK2-204ENST00000489633 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
NEK2-204ENST00000489633 EMP3P54852 163 aa9.49□□□□□ -0.89
NEK2-204ENST00000489633 POTEB3A0JP26 581 aa9.45□□□□□ -0.9
NEK2-204ENST00000489633 FAM205CA6NFA0 338 aa9.45□□□□□ -0.9
NEK2-204ENST00000489633 POTEBQ6S5H4 581 aa9.45□□□□□ -0.9
NEK2-204ENST00000489633 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms