RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 RASEFQ8IZ41 740 aa10.43□□□□□ -0.74
KDM3A-213ENST00000488971 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
KDM3A-213ENST00000488971 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
KDM3A-213ENST00000488971 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
KDM3A-213ENST00000488971 ATMINO43313 823 aaPredicted RBP10.37□□□□□ -0.75
KDM3A-213ENST00000488971 ASTLQ6HA08 431 aaPredicted RBP10.36□□□□□ -0.75
KDM3A-213ENST00000488971 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
KDM3A-213ENST00000488971 MAP3K13O43283 966 aa10.35□□□□□ -0.75
KDM3A-213ENST00000488971 SLC39A7Q92504 469 aa10.34□□□□□ -0.75
KDM3A-213ENST00000488971 METRNQ9UJH8 293 aa10.33□□□□□ -0.76
KDM3A-213ENST00000488971 NUBP1P53384 320 aa10.32□□□□□ -0.76
KDM3A-213ENST00000488971 C7P10643 843 aa10.31□□□□□ -0.76
KDM3A-213ENST00000488971 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
KDM3A-213ENST00000488971 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
KDM3A-213ENST00000488971 ATN1P54259 1190 aaPredicted RBP10.3□□□□□ -0.76
KDM3A-213ENST00000488971 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
KDM3A-213ENST00000488971 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
KDM3A-213ENST00000488971 PCDHB13Q9Y5F0 798 aa10.28□□□□□ -0.76
KDM3A-213ENST00000488971 OTUD5Q96G74 571 aa10.27□□□□□ -0.77
KDM3A-213ENST00000488971 TIE1P35590 1138 aa10.26□□□□□ -0.77
KDM3A-213ENST00000488971 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
KDM3A-213ENST00000488971 SGIP1Q9BQI5 828 aa10.24□□□□□ -0.77
KDM3A-213ENST00000488971 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
KDM3A-213ENST00000488971 TTLL13PA6NNM8 815 aa10.21□□□□□ -0.77
KDM3A-213ENST00000488971 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.77
KDM3A-213ENST00000488971 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
KDM3A-213ENST00000488971 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
KDM3A-213ENST00000488971 SEC24BO95487 1268 aa10.17□□□□□ -0.78
KDM3A-213ENST00000488971 PYGBP11216 843 aa10.16□□□□□ -0.78
KDM3A-213ENST00000488971 TRIM35Q9UPQ4 493 aa10.16□□□□□ -0.78
KDM3A-213ENST00000488971 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
KDM3A-213ENST00000488971 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
KDM3A-213ENST00000488971 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
KDM3A-213ENST00000488971 POTEFA5A3E0 1075 aa10.12□□□□□ -0.79
KDM3A-213ENST00000488971 GSE1Q14687 1217 aa10.11□□□□□ -0.79
KDM3A-213ENST00000488971 IER5LQ5T953 404 aa10.1□□□□□ -0.79
KDM3A-213ENST00000488971 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
KDM3A-213ENST00000488971 PCDHB8Q9UN66 801 aa10.08□□□□□ -0.8
KDM3A-213ENST00000488971 PLCG2P16885 1265 aa10.05□□□□□ -0.8
KDM3A-213ENST00000488971 SPOCK2Q92563 424 aa10.02□□□□□ -0.81
KDM3A-213ENST00000488971 POTEMA6NI47 508 aa10.01□□□□□ -0.81
KDM3A-213ENST00000488971 ZNF467Q7Z7K2 595 aaPredicted RBP10.01□□□□□ -0.81
KDM3A-213ENST00000488971 IFNLR1Q8IU57 520 aaPredicted RBP10□□□□□ -0.81
KDM3A-213ENST00000488971 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
KDM3A-213ENST00000488971 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
KDM3A-213ENST00000488971 POTEGQ6S5H5 508 aa9.99□□□□□ -0.81
KDM3A-213ENST00000488971 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
KDM3A-213ENST00000488971 PLSCR2Q9NRY7 297 aa9.98□□□□□ -0.81
KDM3A-213ENST00000488971 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
KDM3A-213ENST00000488971 GOLGA2Q08379 1002 aa9.96□□□□□ -0.82
KDM3A-213ENST00000488971 OCEL1Q9H607 264 aa9.96□□□□□ -0.82
KDM3A-213ENST00000488971 SLAIN1Q8ND83 568 aa9.94□□□□□ -0.82
KDM3A-213ENST00000488971 PSEN1P49768 467 aa9.93□□□□□ -0.82
KDM3A-213ENST00000488971 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
KDM3A-213ENST00000488971 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
KDM3A-213ENST00000488971 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
KDM3A-213ENST00000488971 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
KDM3A-213ENST00000488971 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.86□□□□□ -0.83
KDM3A-213ENST00000488971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.839e-8■■□□□ 11.5
KDM3A-213ENST00000488971 PCDH10Q9P2E7 1040 aa9.84□□□□□ -0.83
KDM3A-213ENST00000488971 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
KDM3A-213ENST00000488971 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
KDM3A-213ENST00000488971 L3MBTL3Q96JM7 780 aaPredicted RBP9.82□□□□□ -0.84
KDM3A-213ENST00000488971 CABP2Q9NPB3 220 aa9.82□□□□□ -0.84
KDM3A-213ENST00000488971 TRIM41Q8WV44 630 aa9.81□□□□□ -0.84
KDM3A-213ENST00000488971 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
KDM3A-213ENST00000488971 SLC24A1O60721 1099 aa9.79□□□□□ -0.84
KDM3A-213ENST00000488971 ST18O60284 1047 aa9.78□□□□□ -0.84
KDM3A-213ENST00000488971 SNPHO15079 494 aa9.77□□□□□ -0.85
KDM3A-213ENST00000488971 G3V3G9 751 aa9.75□□□□□ -0.85
KDM3A-213ENST00000488971 DPY19L2Q6NUT2 758 aa9.72□□□□□ -0.85
KDM3A-213ENST00000488971 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.86
KDM3A-213ENST00000488971 ILDR1Q86SU0 546 aaPredicted RBP9.7□□□□□ -0.86
KDM3A-213ENST00000488971 RIOK3O14730 519 aaKnown RBP9.69□□□□□ -0.86
KDM3A-213ENST00000488971 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
KDM3A-213ENST00000488971 EFCAB3Q8N7B9 438 aa9.68□□□□□ -0.86
KDM3A-213ENST00000488971 TMEM121BQ9BXQ6 578 aaPredicted RBP9.67□□□□□ -0.86
KDM3A-213ENST00000488971 VGFO15240 615 aaPredicted RBP9.64□□□□□ -0.87
KDM3A-213ENST00000488971 MARVELD3Q96A59 401 aa9.64□□□□□ -0.87
KDM3A-213ENST00000488971 RNF25Q96BH1 459 aaPredicted RBP9.64□□□□□ -0.87
KDM3A-213ENST00000488971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.63□□□□□ -0.87
KDM3A-213ENST00000488971 ZFP91Q96JP5 570 aaPredicted RBP9.63□□□□□ -0.87
KDM3A-213ENST00000488971 SOX12O15370 315 aa9.59□□□□□ -0.87
KDM3A-213ENST00000488971 EMP3P54852 163 aa9.59□□□□□ -0.87
KDM3A-213ENST00000488971 TAOK2Q9UL54 1235 aa9.59□□□□□ -0.87
KDM3A-213ENST00000488971 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
KDM3A-213ENST00000488971 PHF8Q9UPP1 1060 aa9.55□□□□□ -0.88
KDM3A-213ENST00000488971 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
KDM3A-213ENST00000488971 MICALL2Q8IY33 904 aa9.53□□□□□ -0.88
KDM3A-213ENST00000488971 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
KDM3A-213ENST00000488971 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
KDM3A-213ENST00000488971 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
KDM3A-213ENST00000488971 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
KDM3A-213ENST00000488971 MS4A4AQ96JQ5 239 aa9.51□□□□□ -0.89
KDM3A-213ENST00000488971 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
KDM3A-213ENST00000488971 NLRP6P59044 892 aa9.5□□□□□ -0.89
KDM3A-213ENST00000488971 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
KDM3A-213ENST00000488971 STK25O00506 426 aa9.49□□□□□ -0.89
KDM3A-213ENST00000488971 RIMBP2O15034 1052 aa9.47□□□□□ -0.89
KDM3A-213ENST00000488971 TMEM92Q6UXU6 159 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms