RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 WRNQ14191 1432 aaPredicted RBP eCLIP8.79□□□□□ -1
SIK3-212ENST00000488337 RSPH4AQ5TD94 716 aa8.79□□□□□ -1
SIK3-212ENST00000488337 FAM43AQ8N2R8 423 aa8.77□□□□□ -1.01
SIK3-212ENST00000488337 PPP6R1Q9UPN7 881 aa8.77□□□□□ -1.01
SIK3-212ENST00000488337 RANGAP1P46060 587 aaPredicted RBP8.76□□□□□ -1.01
SIK3-212ENST00000488337 USP35Q9P2H5 1018 aa8.76□□□□□ -1.01
SIK3-212ENST00000488337 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
SIK3-212ENST00000488337 RRP9O43818 475 aaKnown RBP8.76□□□□□ -1.01
SIK3-212ENST00000488337 HNRNPUL2Q1KMD3 747 aaKnown RBP8.76□□□□□ -1.01
SIK3-212ENST00000488337 UNC13AQ9UPW8 1703 aa8.75□□□□□ -1.01
SIK3-212ENST00000488337 CDK11AQ9UQ88 783 aaPredicted RBP8.74□□□□□ -1.01
SIK3-212ENST00000488337 CENPJQ9HC77 1338 aaPredicted RBP8.73□□□□□ -1.01
SIK3-212ENST00000488337 CECR2Q9BXF3 1484 aa8.73□□□□□ -1.01
SIK3-212ENST00000488337 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
SIK3-212ENST00000488337 RTL5Q5HYW3 569 aaPredicted RBP8.7□□□□□ -1.02
SIK3-212ENST00000488337 IPO9Q96P70 1041 aaKnown RBP8.7□□□□□ -1.02
SIK3-212ENST00000488337 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
SIK3-212ENST00000488337 CEP162Q5TB80 1403 aa8.68□□□□□ -1.02
SIK3-212ENST00000488337 NCAPD3P42695 1498 aa8.68□□□□□ -1.02
SIK3-212ENST00000488337 GTF2E1P29083 439 aaPredicted RBP8.67□□□□□ -1.02
SIK3-212ENST00000488337 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
SIK3-212ENST00000488337 BICRAQ9NZM4 1560 aa8.67□□□□□ -1.02
SIK3-212ENST00000488337 HSP90AA2PQ14568 343 aaPredicted RBP8.65□□□□□ -1.02
SIK3-212ENST00000488337 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.02
SIK3-212ENST00000488337 NAP1L2Q9ULW6 460 aaPredicted RBP8.65□□□□□ -1.02
SIK3-212ENST00000488337 TNIKQ9UKE5 1360 aa8.64□□□□□ -1.03
SIK3-212ENST00000488337 CHRM1P11229 460 aaPredicted RBP8.63□□□□□ -1.03
SIK3-212ENST00000488337 IPO4Q8TEX9 1081 aaKnown RBP8.63□□□□□ -1.03
SIK3-212ENST00000488337 GSE1Q14687 1217 aa8.62□□□□□ -1.03
SIK3-212ENST00000488337 BRD2P25440 801 aaKnown RBP8.61□□□□□ -1.03
SIK3-212ENST00000488337 PAXIP1Q6ZW49 1069 aaPredicted RBP8.61□□□□□ -1.03
SIK3-212ENST00000488337 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
SIK3-212ENST00000488337 DCAF11Q8TEB1 546 aa8.6□□□□□ -1.03
SIK3-212ENST00000488337 CCDC88BA6NC98 1476 aa8.6□□□□□ -1.03
SIK3-212ENST00000488337 RRAGDQ9NQL2 400 aaPredicted RBP8.59□□□□□ -1.03
SIK3-212ENST00000488337 SOGA1O94964 1423 aa8.59□□□□□ -1.03
SIK3-212ENST00000488337 NEFMP07197 916 aa8.59□□□□□ -1.03
SIK3-212ENST00000488337 WIZO95785 1651 aa8.59□□□□□ -1.03
SIK3-212ENST00000488337 EEA1Q15075 1411 aa8.59□□□□□ -1.03
SIK3-212ENST00000488337 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
SIK3-212ENST00000488337 PPP4R2Q9NY27 417 aa8.58□□□□□ -1.04
SIK3-212ENST00000488337 SMARCA4P51532 1647 aa8.57□□□□□ -1.04
SIK3-212ENST00000488337 BBXQ8WY36 941 aaPredicted RBP8.57□□□□□ -1.04
SIK3-212ENST00000488337 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
SIK3-212ENST00000488337 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
SIK3-212ENST00000488337 FOXD1Q16676 465 aa8.56□□□□□ -1.04
SIK3-212ENST00000488337 SAMD1Q6SPF0 538 aaPredicted RBP8.56□□□□□ -1.04
SIK3-212ENST00000488337 CHMP4BQ9H444 224 aaKnown RBP8.56□□□□□ -1.04
SIK3-212ENST00000488337 ABCC8Q09428 1581 aa8.56□□□□□ -1.04
SIK3-212ENST00000488337 RGS3P49796 1198 aa8.56□□□□□ -1.04
SIK3-212ENST00000488337 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
SIK3-212ENST00000488337 PEG3Q9GZU2 1588 aa8.55□□□□□ -1.04
SIK3-212ENST00000488337 GOLGA3Q08378 1498 aa8.55□□□□□ -1.04
SIK3-212ENST00000488337 FRAT1Q92837 279 aaPredicted RBP8.54□□□□□ -1.04
SIK3-212ENST00000488337 HSP90AA1P07900 732 aaKnown RBP8.54□□□□□ -1.04
SIK3-212ENST00000488337 PDCL3Q9H2J4 239 aa8.53□□□□□ -1.04
SIK3-212ENST00000488337 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
SIK3-212ENST00000488337 NAP1L5Q96NT1 182 aaPredicted RBP8.53□□□□□ -1.04
SIK3-212ENST00000488337 CLIP1P30622 1438 aa8.52□□□□□ -1.04
SIK3-212ENST00000488337 POTEDQ86YR6 584 aa8.52□□□□□ -1.05
SIK3-212ENST00000488337 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
SIK3-212ENST00000488337 ANP32AP39687 249 aaKnown RBP8.52□□□□□ -1.05
SIK3-212ENST00000488337 TEX2Q8IWB9 1127 aa8.51□□□□□ -1.05
SIK3-212ENST00000488337 SLC4A1APQ9BWU0 796 aaKnown RBP8.51□□□□□ -1.05
SIK3-212ENST00000488337 CLCN1P35523 988 aa8.51□□□□□ -1.05
SIK3-212ENST00000488337 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
SIK3-212ENST00000488337 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
SIK3-212ENST00000488337 HOMEZQ8IX15 550 aa8.5□□□□□ -1.05
SIK3-212ENST00000488337 SMARCA2P51531 1590 aa8.49□□□□□ -1.05
SIK3-212ENST00000488337 ZFP91Q96JP5 570 aaPredicted RBP8.49□□□□□ -1.05
SIK3-212ENST00000488337 TMEM51Q9NW97 253 aa8.49□□□□□ -1.05
SIK3-212ENST00000488337 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
SIK3-212ENST00000488337 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
SIK3-212ENST00000488337 TOP2AP11388 1531 aaKnown RBP8.48□□□□□ -1.05
SIK3-212ENST00000488337 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
SIK3-212ENST00000488337 VGFO15240 615 aaPredicted RBP8.47□□□□□ -1.05
SIK3-212ENST00000488337 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
SIK3-212ENST00000488337 FBLN2P98095 1184 aa8.47□□□□□ -1.05
SIK3-212ENST00000488337 RNF216Q9NWF9 866 aaPredicted RBP8.46□□□□□ -1.05
SIK3-212ENST00000488337 CANXP27824 592 aaKnown RBP8.46□□□□□ -1.05
SIK3-212ENST00000488337 DNAJC5BQ9UF47 199 aa8.46□□□□□ -1.06
SIK3-212ENST00000488337 SMAP1Q8IYB5 467 aaPredicted RBP8.46□□□□□ -1.06
SIK3-212ENST00000488337 ZNF830Q96NB3 372 aaPredicted RBP8.45□□□□□ -1.06
SIK3-212ENST00000488337 UTP14CQ5TAP6 766 aaKnown RBP8.45□□□□□ -1.06
SIK3-212ENST00000488337 TRIM52Q96A61 297 aa8.45□□□□□ -1.06
SIK3-212ENST00000488337 VPS8Q8N3P4 1428 aa8.45□□□□□ -1.06
SIK3-212ENST00000488337 NFKBIBQ15653 356 aa8.44□□□□□ -1.06
SIK3-212ENST00000488337 EIF4G1Q04637 1599 aaKnown RBP8.44□□□□□ -1.06
SIK3-212ENST00000488337 ZBTB22O15209 634 aa8.44□□□□□ -1.06
SIK3-212ENST00000488337 CNKSR2Q8WXI2 1034 aa8.44□□□□□ -1.06
SIK3-212ENST00000488337 SECISBP2LQ93073 1101 aaKnown RBP8.44□□□□□ -1.06
SIK3-212ENST00000488337 BCCIPQ9P287 314 aaKnown RBP eCLIP8.43□□□□□ -1.06
SIK3-212ENST00000488337 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
SIK3-212ENST00000488337 CUX2O14529 1486 aa8.43□□□□□ -1.06
SIK3-212ENST00000488337 PPP4R3CPQ6ZMV5 832 aa8.43□□□□□ -1.06
SIK3-212ENST00000488337 DDRGK1Q96HY6 314 aa8.43□□□□□ -1.06
SIK3-212ENST00000488337 ATAD2BQ9ULI0 1458 aa8.42□□□□□ -1.06
SIK3-212ENST00000488337 IRX6P78412 446 aaPredicted RBP8.42□□□□□ -1.06
SIK3-212ENST00000488337 B4GALNT3Q6L9W6 998 aa8.42□□□□□ -1.06
SIK3-212ENST00000488337 RNF123Q5XPI4 1314 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms