RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
PTEN-204ENST00000487939 NUBP1P53384 320 aa12.42□□□□□ -0.42
PTEN-204ENST00000487939 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
PTEN-204ENST00000487939 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
PTEN-204ENST00000487939 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
PTEN-204ENST00000487939 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
PTEN-204ENST00000487939 GSE1Q14687 1217 aa12.37□□□□□ -0.43
PTEN-204ENST00000487939 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
PTEN-204ENST00000487939 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
PTEN-204ENST00000487939 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
PTEN-204ENST00000487939 PAK3O75914 559 aaPredicted RBP12.33□□□□□ -0.44
PTEN-204ENST00000487939 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
PTEN-204ENST00000487939 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
PTEN-204ENST00000487939 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
PTEN-204ENST00000487939 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
PTEN-204ENST00000487939 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
PTEN-204ENST00000487939 PKD2Q13563 968 aa12.26□□□□□ -0.45
PTEN-204ENST00000487939 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
PTEN-204ENST00000487939 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
PTEN-204ENST00000487939 POTEMA6NI47 508 aa12.17□□□□□ -0.46
PTEN-204ENST00000487939 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
PTEN-204ENST00000487939 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
PTEN-204ENST00000487939 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
PTEN-204ENST00000487939 PYGBP11216 843 aa12.14□□□□□ -0.47
PTEN-204ENST00000487939 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
PTEN-204ENST00000487939 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
PTEN-204ENST00000487939 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
PTEN-204ENST00000487939 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
PTEN-204ENST00000487939 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
PTEN-204ENST00000487939 C7P10643 843 aa12.08□□□□□ -0.48
PTEN-204ENST00000487939 RGL2O15211 777 aa12.06□□□□□ -0.48
PTEN-204ENST00000487939 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
PTEN-204ENST00000487939 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
PTEN-204ENST00000487939 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
PTEN-204ENST00000487939 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
PTEN-204ENST00000487939 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
PTEN-204ENST00000487939 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
PTEN-204ENST00000487939 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
PTEN-204ENST00000487939 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
PTEN-204ENST00000487939 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
PTEN-204ENST00000487939 MAP3K13O43283 966 aa12.02□□□□□ -0.49
PTEN-204ENST00000487939 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
PTEN-204ENST00000487939 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
PTEN-204ENST00000487939 VGFO15240 615 aaPredicted RBP11.97□□□□□ -0.49
PTEN-204ENST00000487939 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
PTEN-204ENST00000487939 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
PTEN-204ENST00000487939 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
PTEN-204ENST00000487939 LCE2DQ5TA82 110 aaPredicted RBP11.94□□□□□ -0.5
PTEN-204ENST00000487939 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
PTEN-204ENST00000487939 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
PTEN-204ENST00000487939 POTEFA5A3E0 1075 aa11.88□□□□□ -0.51
PTEN-204ENST00000487939 PSEN1P49768 467 aa11.88□□□□□ -0.51
PTEN-204ENST00000487939 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
PTEN-204ENST00000487939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
PTEN-204ENST00000487939 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
PTEN-204ENST00000487939 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
PTEN-204ENST00000487939 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
PTEN-204ENST00000487939 STK25O00506 426 aa11.85□□□□□ -0.51
PTEN-204ENST00000487939 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
PTEN-204ENST00000487939 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
PTEN-204ENST00000487939 TIE1P35590 1138 aa11.84□□□□□ -0.51
PTEN-204ENST00000487939 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
PTEN-204ENST00000487939 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
PTEN-204ENST00000487939 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
PTEN-204ENST00000487939 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
PTEN-204ENST00000487939 TTLL13PA6NNM8 815 aa11.75□□□□□ -0.53
PTEN-204ENST00000487939 DNAJC5Q9H3Z4 198 aa11.75□□□□□ -0.53
PTEN-204ENST00000487939 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
PTEN-204ENST00000487939 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
PTEN-204ENST00000487939 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
PTEN-204ENST00000487939 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
PTEN-204ENST00000487939 SEC24BO95487 1268 aa11.71□□□□□ -0.53
PTEN-204ENST00000487939 IER5LQ5T953 404 aa11.69□□□□□ -0.54
PTEN-204ENST00000487939 MKRN3Q13064 507 aaKnown RBP11.67□□□□□ -0.54
PTEN-204ENST00000487939 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
PTEN-204ENST00000487939 RYDENQ9NUL5 291 aaKnown RBP11.66□□□□□ -0.54
PTEN-204ENST00000487939 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
PTEN-204ENST00000487939 SOX12O15370 315 aa11.64□□□□□ -0.55
PTEN-204ENST00000487939 CDAN1Q8IWY9 1227 aa11.64□□□□□ -0.55
PTEN-204ENST00000487939 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
PTEN-204ENST00000487939 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
PTEN-204ENST00000487939 NLRP6P59044 892 aa11.59□□□□□ -0.55
PTEN-204ENST00000487939 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
PTEN-204ENST00000487939 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
PTEN-204ENST00000487939 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
PTEN-204ENST00000487939 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
PTEN-204ENST00000487939 ST18O60284 1047 aa11.56□□□□□ -0.56
PTEN-204ENST00000487939 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
PTEN-204ENST00000487939 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
PTEN-204ENST00000487939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTEN-204ENST00000487939 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
PTEN-204ENST00000487939 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
PTEN-204ENST00000487939 PLCG2P16885 1265 aa11.51□□□□□ -0.57
PTEN-204ENST00000487939 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
PTEN-204ENST00000487939 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
PTEN-204ENST00000487939 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
PTEN-204ENST00000487939 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
PTEN-204ENST00000487939 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
PTEN-204ENST00000487939 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
PTEN-204ENST00000487939 G3V3G9 751 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms