RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
COPS3-209ENST00000486810 GSE1Q14687 1217 aa13.06□□□□□ -0.32
COPS3-209ENST00000486810 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
COPS3-209ENST00000486810 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
COPS3-209ENST00000486810 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
COPS3-209ENST00000486810 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
COPS3-209ENST00000486810 PYGBP11216 843 aa12.99□□□□□ -0.33
COPS3-209ENST00000486810 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
COPS3-209ENST00000486810 KIF12Q96FN5 646 aa12.97□□□□□ -0.33
COPS3-209ENST00000486810 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
COPS3-209ENST00000486810 MAP3K13O43283 966 aa12.93□□□□□ -0.34
COPS3-209ENST00000486810 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
COPS3-209ENST00000486810 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
COPS3-209ENST00000486810 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
COPS3-209ENST00000486810 RNF25Q96BH1 459 aaPredicted RBP12.9□□□□□ -0.34
COPS3-209ENST00000486810 GABBR2O75899 941 aa12.88□□□□□ -0.35
COPS3-209ENST00000486810 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
COPS3-209ENST00000486810 RGL2O15211 777 aa12.86□□□□□ -0.35
COPS3-209ENST00000486810 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
COPS3-209ENST00000486810 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
COPS3-209ENST00000486810 PCDHB13Q9Y5F0 798 aa12.84□□□□□ -0.35
COPS3-209ENST00000486810 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
COPS3-209ENST00000486810 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
COPS3-209ENST00000486810 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
COPS3-209ENST00000486810 CLCN6P51797 869 aa12.79□□□□□ -0.36
COPS3-209ENST00000486810 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
COPS3-209ENST00000486810 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
COPS3-209ENST00000486810 POTEIP0CG38 1075 aa12.68□□□□□ -0.38
COPS3-209ENST00000486810 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
COPS3-209ENST00000486810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
COPS3-209ENST00000486810 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
COPS3-209ENST00000486810 PSEN1P49768 467 aa12.66□□□□□ -0.38
COPS3-209ENST00000486810 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
COPS3-209ENST00000486810 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
COPS3-209ENST00000486810 TIE1P35590 1138 aa12.65□□□□□ -0.38
COPS3-209ENST00000486810 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
COPS3-209ENST00000486810 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
COPS3-209ENST00000486810 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
COPS3-209ENST00000486810 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
COPS3-209ENST00000486810 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
COPS3-209ENST00000486810 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
COPS3-209ENST00000486810 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
COPS3-209ENST00000486810 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.4
COPS3-209ENST00000486810 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
COPS3-209ENST00000486810 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
COPS3-209ENST00000486810 STK25O00506 426 aa12.54□□□□□ -0.4
COPS3-209ENST00000486810 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
COPS3-209ENST00000486810 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
COPS3-209ENST00000486810 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
COPS3-209ENST00000486810 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
COPS3-209ENST00000486810 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
COPS3-209ENST00000486810 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
COPS3-209ENST00000486810 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
COPS3-209ENST00000486810 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
COPS3-209ENST00000486810 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
COPS3-209ENST00000486810 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
COPS3-209ENST00000486810 IER5LQ5T953 404 aa12.39□□□□□ -0.43
COPS3-209ENST00000486810 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
COPS3-209ENST00000486810 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
COPS3-209ENST00000486810 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
COPS3-209ENST00000486810 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
COPS3-209ENST00000486810 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
COPS3-209ENST00000486810 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
COPS3-209ENST00000486810 COLQQ9Y215 455 aaPredicted RBP12.38□□□□□ -0.43
COPS3-209ENST00000486810 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
COPS3-209ENST00000486810 C7P10643 843 aa12.36□□□□□ -0.43
COPS3-209ENST00000486810 BBXQ8WY36 941 aaPredicted RBP12.36□□□□□ -0.43
COPS3-209ENST00000486810 SOX12O15370 315 aa12.35□□□□□ -0.43
COPS3-209ENST00000486810 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
COPS3-209ENST00000486810 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
COPS3-209ENST00000486810 MS4A4AQ96JQ5 239 aa12.34□□□□□ -0.43
COPS3-209ENST00000486810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
COPS3-209ENST00000486810 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
COPS3-209ENST00000486810 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
COPS3-209ENST00000486810 GTPBP6O43824 516 aaPredicted RBP12.29□□□□□ -0.44
COPS3-209ENST00000486810 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
COPS3-209ENST00000486810 SEC24BO95487 1268 aa12.27□□□□□ -0.45
COPS3-209ENST00000486810 NLRP6P59044 892 aa12.27□□□□□ -0.45
COPS3-209ENST00000486810 PLCG2P16885 1265 aa12.26□□□□□ -0.45
COPS3-209ENST00000486810 PPP1R37O75864 691 aa12.24□□□□□ -0.45
COPS3-209ENST00000486810 POTEJP0CG39 1038 aa12.24□□□□□ -0.45
COPS3-209ENST00000486810 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
COPS3-209ENST00000486810 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
COPS3-209ENST00000486810 SPRYD3Q8NCJ5 442 aa12.16□□□□□ -0.46
COPS3-209ENST00000486810 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
COPS3-209ENST00000486810 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
COPS3-209ENST00000486810 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
COPS3-209ENST00000486810 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
COPS3-209ENST00000486810 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
COPS3-209ENST00000486810 LHX8Q68G74 356 aa12.11□□□□□ -0.47
COPS3-209ENST00000486810 MICALL2Q8IY33 904 aa12.11□□□□□ -0.47
COPS3-209ENST00000486810 L3MBTL3Q96JM7 780 aaPredicted RBP12.1□□□□□ -0.47
COPS3-209ENST00000486810 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
COPS3-209ENST00000486810 TMEM92Q6UXU6 159 aa12.03□□□□□ -0.48
COPS3-209ENST00000486810 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
COPS3-209ENST00000486810 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
COPS3-209ENST00000486810 G3V3G9 751 aa11.98□□□□□ -0.49
COPS3-209ENST00000486810 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
COPS3-209ENST00000486810 C3orf67Q6ZVT6 689 aa11.96□□□□□ -0.49
COPS3-209ENST00000486810 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms