RNA–Protein interactions for RNA: ENST00000486022.1

LSMEM1-205, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-205ENST00000486022 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
LSMEM1-205ENST00000486022 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
LSMEM1-205ENST00000486022 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
LSMEM1-205ENST00000486022 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
LSMEM1-205ENST00000486022 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
LSMEM1-205ENST00000486022 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
LSMEM1-205ENST00000486022 MAP3K13O43283 966 aa12.79□□□□□ -0.36
LSMEM1-205ENST00000486022 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
LSMEM1-205ENST00000486022 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
LSMEM1-205ENST00000486022 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
LSMEM1-205ENST00000486022 TRPC6Q9Y210 931 aa12.74□□□□□ -0.37
LSMEM1-205ENST00000486022 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
LSMEM1-205ENST00000486022 ATMINO43313 823 aaPredicted RBP12.67□□□□□ -0.38
LSMEM1-205ENST00000486022 LHX8Q68G74 356 aa12.67□□□□□ -0.38
LSMEM1-205ENST00000486022 PYGBP11216 843 aa12.66□□□□□ -0.38
LSMEM1-205ENST00000486022 ASTLQ6HA08 431 aaPredicted RBP12.66□□□□□ -0.38
LSMEM1-205ENST00000486022 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
LSMEM1-205ENST00000486022 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
LSMEM1-205ENST00000486022 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
LSMEM1-205ENST00000486022 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
LSMEM1-205ENST00000486022 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
LSMEM1-205ENST00000486022 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
LSMEM1-205ENST00000486022 GSE1Q14687 1217 aa12.58□□□□□ -0.4
LSMEM1-205ENST00000486022 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
LSMEM1-205ENST00000486022 TIE1P35590 1138 aa12.56□□□□□ -0.4
LSMEM1-205ENST00000486022 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
LSMEM1-205ENST00000486022 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
LSMEM1-205ENST00000486022 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
LSMEM1-205ENST00000486022 METRNQ9UJH8 293 aa12.52□□□□□ -0.41
LSMEM1-205ENST00000486022 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
LSMEM1-205ENST00000486022 C7P10643 843 aa12.49□□□□□ -0.41
LSMEM1-205ENST00000486022 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
LSMEM1-205ENST00000486022 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
LSMEM1-205ENST00000486022 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
LSMEM1-205ENST00000486022 POTEFA5A3E0 1075 aa12.46□□□□□ -0.41
LSMEM1-205ENST00000486022 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
LSMEM1-205ENST00000486022 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
LSMEM1-205ENST00000486022 COLQQ9Y215 455 aaPredicted RBP12.41□□□□□ -0.42
LSMEM1-205ENST00000486022 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
LSMEM1-205ENST00000486022 SEC24BO95487 1268 aa12.33□□□□□ -0.44
LSMEM1-205ENST00000486022 PSEN1P49768 467 aa12.33□□□□□ -0.44
LSMEM1-205ENST00000486022 IER5LQ5T953 404 aa12.32□□□□□ -0.44
LSMEM1-205ENST00000486022 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
LSMEM1-205ENST00000486022 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
LSMEM1-205ENST00000486022 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
LSMEM1-205ENST00000486022 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
LSMEM1-205ENST00000486022 PLCG2P16885 1265 aa12.23□□□□□ -0.45
LSMEM1-205ENST00000486022 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
LSMEM1-205ENST00000486022 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
LSMEM1-205ENST00000486022 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
LSMEM1-205ENST00000486022 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
LSMEM1-205ENST00000486022 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
LSMEM1-205ENST00000486022 PKD2Q13563 968 aa12.18□□□□□ -0.46
LSMEM1-205ENST00000486022 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
LSMEM1-205ENST00000486022 SCUBE2Q9NQ36 999 aa12.17□□□□□ -0.46
LSMEM1-205ENST00000486022 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
LSMEM1-205ENST00000486022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
LSMEM1-205ENST00000486022 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
LSMEM1-205ENST00000486022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
LSMEM1-205ENST00000486022 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
LSMEM1-205ENST00000486022 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
LSMEM1-205ENST00000486022 EFCAB3Q8N7B9 438 aa12.1□□□□□ -0.47
LSMEM1-205ENST00000486022 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
LSMEM1-205ENST00000486022 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
LSMEM1-205ENST00000486022 RGL2O15211 777 aa12.07□□□□□ -0.48
LSMEM1-205ENST00000486022 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
LSMEM1-205ENST00000486022 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
LSMEM1-205ENST00000486022 LCE2DQ5TA82 110 aaPredicted RBP11.99□□□□□ -0.49
LSMEM1-205ENST00000486022 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
LSMEM1-205ENST00000486022 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
LSMEM1-205ENST00000486022 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
LSMEM1-205ENST00000486022 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
LSMEM1-205ENST00000486022 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
LSMEM1-205ENST00000486022 STK25O00506 426 aa11.94□□□□□ -0.5
LSMEM1-205ENST00000486022 SOX12O15370 315 aa11.94□□□□□ -0.5
LSMEM1-205ENST00000486022 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
LSMEM1-205ENST00000486022 TAOK2Q9UL54 1235 aa11.93□□□□□ -0.5
LSMEM1-205ENST00000486022 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
LSMEM1-205ENST00000486022 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
LSMEM1-205ENST00000486022 POTEMA6NI47 508 aa11.9□□□□□ -0.5
LSMEM1-205ENST00000486022 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
LSMEM1-205ENST00000486022 FBXO22Q8NEZ5 403 aa11.87□□□□□ -0.51
LSMEM1-205ENST00000486022 TMEM121BQ9BXQ6 578 aaPredicted RBP11.87□□□□□ -0.51
LSMEM1-205ENST00000486022 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
LSMEM1-205ENST00000486022 G3V3G9 751 aa11.85□□□□□ -0.51
LSMEM1-205ENST00000486022 ST18O60284 1047 aa11.84□□□□□ -0.51
LSMEM1-205ENST00000486022 NLRP6P59044 892 aa11.83□□□□□ -0.52
LSMEM1-205ENST00000486022 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
LSMEM1-205ENST00000486022 TMEM92Q6UXU6 159 aa11.79□□□□□ -0.52
LSMEM1-205ENST00000486022 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
LSMEM1-205ENST00000486022 SNPHO15079 494 aa11.75□□□□□ -0.53
LSMEM1-205ENST00000486022 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
LSMEM1-205ENST00000486022 PPP1R37O75864 691 aa11.73□□□□□ -0.53
LSMEM1-205ENST00000486022 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
LSMEM1-205ENST00000486022 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
LSMEM1-205ENST00000486022 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
LSMEM1-205ENST00000486022 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
LSMEM1-205ENST00000486022 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
LSMEM1-205ENST00000486022 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
LSMEM1-205ENST00000486022 PLSCR2Q9NRY7 297 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms