RNA–Protein interactions for RNA: ENST00000485506.1

NECTIN3-207, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 2

Gene NECTIN3, Length 314 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-207ENST00000485506 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
NECTIN3-207ENST00000485506 ASTLQ6HA08 431 aaPredicted RBP13.39□□□□□ -0.27
NECTIN3-207ENST00000485506 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
NECTIN3-207ENST00000485506 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
NECTIN3-207ENST00000485506 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
NECTIN3-207ENST00000485506 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
NECTIN3-207ENST00000485506 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
NECTIN3-207ENST00000485506 C7P10643 843 aa13.31□□□□□ -0.28
NECTIN3-207ENST00000485506 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
NECTIN3-207ENST00000485506 METRNQ9UJH8 293 aa13.28□□□□□ -0.28
NECTIN3-207ENST00000485506 MAP3K13O43283 966 aa13.27□□□□□ -0.29
NECTIN3-207ENST00000485506 NUBP1P53384 320 aa13.26□□□□□ -0.29
NECTIN3-207ENST00000485506 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
NECTIN3-207ENST00000485506 SGIP1Q9BQI5 828 aa13.25□□□□□ -0.29
NECTIN3-207ENST00000485506 TIE1P35590 1138 aa13.24□□□□□ -0.29
NECTIN3-207ENST00000485506 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
NECTIN3-207ENST00000485506 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
NECTIN3-207ENST00000485506 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
NECTIN3-207ENST00000485506 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
NECTIN3-207ENST00000485506 PCDHB13Q9Y5F0 798 aa13.17□□□□□ -0.3
NECTIN3-207ENST00000485506 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
NECTIN3-207ENST00000485506 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
NECTIN3-207ENST00000485506 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
NECTIN3-207ENST00000485506 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
NECTIN3-207ENST00000485506 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
NECTIN3-207ENST00000485506 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
NECTIN3-207ENST00000485506 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
NECTIN3-207ENST00000485506 IER5LQ5T953 404 aa13.06□□□□□ -0.32
NECTIN3-207ENST00000485506 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
NECTIN3-207ENST00000485506 TRIM35Q9UPQ4 493 aa13.04□□□□□ -0.32
NECTIN3-207ENST00000485506 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
NECTIN3-207ENST00000485506 SEC24BO95487 1268 aa13.03□□□□□ -0.32
NECTIN3-207ENST00000485506 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
NECTIN3-207ENST00000485506 GSE1Q14687 1217 aa12.99□□□□□ -0.33
NECTIN3-207ENST00000485506 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
NECTIN3-207ENST00000485506 PYGBP11216 843 aa12.97□□□□□ -0.33
NECTIN3-207ENST00000485506 COLQQ9Y215 455 aaPredicted RBP12.96□□□□□ -0.33
NECTIN3-207ENST00000485506 POTEMA6NI47 508 aa12.89□□□□□ -0.35
NECTIN3-207ENST00000485506 PLCG2P16885 1265 aa12.89□□□□□ -0.35
NECTIN3-207ENST00000485506 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
NECTIN3-207ENST00000485506 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
NECTIN3-207ENST00000485506 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
NECTIN3-207ENST00000485506 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
NECTIN3-207ENST00000485506 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
NECTIN3-207ENST00000485506 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
NECTIN3-207ENST00000485506 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
NECTIN3-207ENST00000485506 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
NECTIN3-207ENST00000485506 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
NECTIN3-207ENST00000485506 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
NECTIN3-207ENST00000485506 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.37
NECTIN3-207ENST00000485506 GOLGA2Q08379 1002 aa12.75□□□□□ -0.37
NECTIN3-207ENST00000485506 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
NECTIN3-207ENST00000485506 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
NECTIN3-207ENST00000485506 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
NECTIN3-207ENST00000485506 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
NECTIN3-207ENST00000485506 PSEN1P49768 467 aa12.71□□□□□ -0.37
NECTIN3-207ENST00000485506 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
NECTIN3-207ENST00000485506 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
NECTIN3-207ENST00000485506 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
NECTIN3-207ENST00000485506 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
NECTIN3-207ENST00000485506 L3MBTL3Q96JM7 780 aaPredicted RBP12.64□□□□□ -0.39
NECTIN3-207ENST00000485506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.39
NECTIN3-207ENST00000485506 SNPHO15079 494 aa12.6□□□□□ -0.39
NECTIN3-207ENST00000485506 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
NECTIN3-207ENST00000485506 ST18O60284 1047 aa12.57□□□□□ -0.4
NECTIN3-207ENST00000485506 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
NECTIN3-207ENST00000485506 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
NECTIN3-207ENST00000485506 TMEM121BQ9BXQ6 578 aaPredicted RBP12.53□□□□□ -0.4
NECTIN3-207ENST00000485506 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
NECTIN3-207ENST00000485506 G3V3G9 751 aa12.47□□□□□ -0.41
NECTIN3-207ENST00000485506 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
NECTIN3-207ENST00000485506 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
NECTIN3-207ENST00000485506 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
NECTIN3-207ENST00000485506 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
NECTIN3-207ENST00000485506 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
NECTIN3-207ENST00000485506 SOX12O15370 315 aa12.35□□□□□ -0.43
NECTIN3-207ENST00000485506 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
NECTIN3-207ENST00000485506 MARVELD3Q96A59 401 aa12.33□□□□□ -0.44
NECTIN3-207ENST00000485506 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
NECTIN3-207ENST00000485506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
NECTIN3-207ENST00000485506 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
NECTIN3-207ENST00000485506 EMP3P54852 163 aa12.3□□□□□ -0.44
NECTIN3-207ENST00000485506 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
NECTIN3-207ENST00000485506 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
NECTIN3-207ENST00000485506 MICALL2Q8IY33 904 aa12.24□□□□□ -0.45
NECTIN3-207ENST00000485506 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
NECTIN3-207ENST00000485506 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.45
NECTIN3-207ENST00000485506 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
NECTIN3-207ENST00000485506 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
NECTIN3-207ENST00000485506 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
NECTIN3-207ENST00000485506 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
NECTIN3-207ENST00000485506 HOXB1P14653 301 aaPredicted RBP12.19□□□□□ -0.46
NECTIN3-207ENST00000485506 NLRP6P59044 892 aa12.19□□□□□ -0.46
NECTIN3-207ENST00000485506 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
NECTIN3-207ENST00000485506 ECM2O94769 699 aaPredicted RBP12.17□□□□□ -0.46
NECTIN3-207ENST00000485506 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
NECTIN3-207ENST00000485506 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
NECTIN3-207ENST00000485506 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
NECTIN3-207ENST00000485506 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
NECTIN3-207ENST00000485506 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms