RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 ATMINO43313 823 aaPredicted RBP15□□□□□ -0.01
RC3H1-205ENST00000484867 MIER1Q8N108 512 aa15□□□□□ -0.01
RC3H1-205ENST00000484867 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
RC3H1-205ENST00000484867 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
RC3H1-205ENST00000484867 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
RC3H1-205ENST00000484867 METRNQ9UJH8 293 aa14.9□□□□□ -0.02
RC3H1-205ENST00000484867 C7P10643 843 aa14.89□□□□□ -0.03
RC3H1-205ENST00000484867 SLC39A7Q92504 469 aa14.89□□□□□ -0.03
RC3H1-205ENST00000484867 POTEJP0CG39 1038 aa14.88□□□□□ -0.03
RC3H1-205ENST00000484867 MAP3K13O43283 966 aa14.87□□□□□ -0.03
RC3H1-205ENST00000484867 ATN1P54259 1190 aaPredicted RBP14.87□□□□□ -0.03
RC3H1-205ENST00000484867 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
RC3H1-205ENST00000484867 FKBP8Q14318 412 aa14.85□□□□□ -0.03
RC3H1-205ENST00000484867 NUBP1P53384 320 aa14.84□□□□□ -0.03
RC3H1-205ENST00000484867 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
RC3H1-205ENST00000484867 BMP2KQ9NSY1 1161 aaPredicted RBP14.84□□□□□ -0.03
RC3H1-205ENST00000484867 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
RC3H1-205ENST00000484867 TIE1P35590 1138 aa14.78□□□□□ -0.04
RC3H1-205ENST00000484867 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
RC3H1-205ENST00000484867 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
RC3H1-205ENST00000484867 TTLL13PA6NNM8 815 aa14.71□□□□□ -0.05
RC3H1-205ENST00000484867 MAMSTRQ6ZN01 415 aa14.66□□□□□ -0.06
RC3H1-205ENST00000484867 PCDHB13Q9Y5F0 798 aa14.65□□□□□ -0.06
RC3H1-205ENST00000484867 IFNL1Q8IU54 200 aa14.63□□□□□ -0.07
RC3H1-205ENST00000484867 COLQQ9Y215 455 aaPredicted RBP14.63□□□□□ -0.07
RC3H1-205ENST00000484867 FAM212AQ96EL1 285 aa14.61□□□□□ -0.07
RC3H1-205ENST00000484867 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
RC3H1-205ENST00000484867 IER5LQ5T953 404 aa14.57□□□□□ -0.08
RC3H1-205ENST00000484867 POTEMA6NI47 508 aa14.56□□□□□ -0.08
RC3H1-205ENST00000484867 LCE2DQ5TA82 110 aaPredicted RBP14.56□□□□□ -0.08
RC3H1-205ENST00000484867 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
RC3H1-205ENST00000484867 SCUBE2Q9NQ36 999 aa14.55□□□□□ -0.08
RC3H1-205ENST00000484867 POTEGQ6S5H5 508 aa14.53□□□□□ -0.08
RC3H1-205ENST00000484867 TMEM106CQ9BVX2 250 aa14.49□□□□□ -0.09
RC3H1-205ENST00000484867 SEC24BO95487 1268 aa14.48□□□□□ -0.09
RC3H1-205ENST00000484867 DCAF8Q5TAQ9 597 aa14.47□□□□□ -0.09
RC3H1-205ENST00000484867 PYGBP11216 843 aa14.45□□□□□ -0.1
RC3H1-205ENST00000484867 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
RC3H1-205ENST00000484867 PLSCR2Q9NRY7 297 aa14.44□□□□□ -0.1
RC3H1-205ENST00000484867 IRX5P78411 483 aaPredicted RBP14.42□□□□□ -0.1
RC3H1-205ENST00000484867 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
RC3H1-205ENST00000484867 PCDHB8Q9UN66 801 aa14.38□□□□□ -0.11
RC3H1-205ENST00000484867 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
RC3H1-205ENST00000484867 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
RC3H1-205ENST00000484867 PLCG2P16885 1265 aa14.32□□□□□ -0.12
RC3H1-205ENST00000484867 GSE1Q14687 1217 aa14.31□□□□□ -0.12
RC3H1-205ENST00000484867 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
RC3H1-205ENST00000484867 OCEL1Q9H607 264 aa14.29□□□□□ -0.12
RC3H1-205ENST00000484867 SLAIN1Q8ND83 568 aa14.25□□□□□ -0.13
RC3H1-205ENST00000484867 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
RC3H1-205ENST00000484867 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
RC3H1-205ENST00000484867 PDCD7Q8N8D1 485 aaKnown RBP14.2□□□□□ -0.14
RC3H1-205ENST00000484867 ST18O60284 1047 aa14.16□□□□□ -0.14
RC3H1-205ENST00000484867 PSEN1P49768 467 aa14.14□□□□□ -0.15
RC3H1-205ENST00000484867 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
RC3H1-205ENST00000484867 ILDR1Q86SU0 546 aaPredicted RBP14.13□□□□□ -0.15
RC3H1-205ENST00000484867 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.08□□□□□ -0.16
RC3H1-205ENST00000484867 MKRN3Q13064 507 aaKnown RBP14.07□□□□□ -0.16
RC3H1-205ENST00000484867 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
RC3H1-205ENST00000484867 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
RC3H1-205ENST00000484867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.162e-6■□□□□ 11.3
RC3H1-205ENST00000484867 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
RC3H1-205ENST00000484867 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
RC3H1-205ENST00000484867 L3MBTL3Q96JM7 780 aaPredicted RBP14.01□□□□□ -0.17
RC3H1-205ENST00000484867 TMEM121BQ9BXQ6 578 aaPredicted RBP14.01□□□□□ -0.17
RC3H1-205ENST00000484867 SNPHO15079 494 aa13.99□□□□□ -0.17
RC3H1-205ENST00000484867 DPY19L2Q6NUT2 758 aa13.96□□□□□ -0.17
RC3H1-205ENST00000484867 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
RC3H1-205ENST00000484867 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
RC3H1-205ENST00000484867 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
RC3H1-205ENST00000484867 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
RC3H1-205ENST00000484867 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
RC3H1-205ENST00000484867 EFCAB3Q8N7B9 438 aa13.8□□□□□ -0.2
RC3H1-205ENST00000484867 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
RC3H1-205ENST00000484867 POTEB3A0JP26 581 aa13.79□□□□□ -0.2
RC3H1-205ENST00000484867 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
RC3H1-205ENST00000484867 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
RC3H1-205ENST00000484867 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
RC3H1-205ENST00000484867 EMP3P54852 163 aa13.74□□□□□ -0.21
RC3H1-205ENST00000484867 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
RC3H1-205ENST00000484867 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
RC3H1-205ENST00000484867 G3V3G9 751 aa13.69□□□□□ -0.22
RC3H1-205ENST00000484867 MS4A4AQ96JQ5 239 aa13.69□□□□□ -0.22
RC3H1-205ENST00000484867 HS3ST6Q96QI5 342 aa13.69□□□□□ -0.22
RC3H1-205ENST00000484867 KRTAP3-3Q9BYR6 98 aa13.69□□□□□ -0.22
RC3H1-205ENST00000484867 KRTAP3-2Q9BYR7 98 aa13.69□□□□□ -0.22
RC3H1-205ENST00000484867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
RC3H1-205ENST00000484867 SOX12O15370 315 aa13.67□□□□□ -0.22
RC3H1-205ENST00000484867 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
RC3H1-205ENST00000484867 TMEM92Q6UXU6 159 aa13.66□□□□□ -0.22
RC3H1-205ENST00000484867 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
RC3H1-205ENST00000484867 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
RC3H1-205ENST00000484867 MICALL2Q8IY33 904 aa13.65□□□□□ -0.22
RC3H1-205ENST00000484867 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
RC3H1-205ENST00000484867 PHF8Q9UPP1 1060 aa13.6□□□□□ -0.23
RC3H1-205ENST00000484867 DOK7Q18PE1 504 aa13.58□□□□□ -0.24
RC3H1-205ENST00000484867 ZNF710Q8N1W2 664 aa13.54□□□□□ -0.24
RC3H1-205ENST00000484867 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
RC3H1-205ENST00000484867 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
RC3H1-205ENST00000484867 ZSWIM6Q9HCJ5 1215 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms