RNA–Protein interactions for RNA: ENST00000484396.1

ACSS1-204, Transcript of acyl-CoA synthetase short chain family member 1, humanhuman

TSL 1 (best)

Gene ACSS1, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS1-204ENST00000484396 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
ACSS1-204ENST00000484396 PDE4CQ08493 712 aa17.24■□□□□ 0.35
ACSS1-204ENST00000484396 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
ACSS1-204ENST00000484396 MIER1Q8N108 512 aa17.23■□□□□ 0.35
ACSS1-204ENST00000484396 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
ACSS1-204ENST00000484396 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
ACSS1-204ENST00000484396 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
ACSS1-204ENST00000484396 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
ACSS1-204ENST00000484396 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
ACSS1-204ENST00000484396 BAZ1AQ9NRL2 1556 aaPredicted RBP17.13■□□□□ 0.33
ACSS1-204ENST00000484396 ARXQ96QS3 562 aa17.13■□□□□ 0.33
ACSS1-204ENST00000484396 ANP32CO43423 234 aa17.12■□□□□ 0.33
ACSS1-204ENST00000484396 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
ACSS1-204ENST00000484396 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
ACSS1-204ENST00000484396 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
ACSS1-204ENST00000484396 ARID4BQ4LE39 1312 aaPredicted RBP17.04■□□□□ 0.32
ACSS1-204ENST00000484396 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
ACSS1-204ENST00000484396 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.32
ACSS1-204ENST00000484396 CHGAP10645 457 aaKnown RBP16.99■□□□□ 0.31
ACSS1-204ENST00000484396 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
ACSS1-204ENST00000484396 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
ACSS1-204ENST00000484396 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
ACSS1-204ENST00000484396 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
ACSS1-204ENST00000484396 MTUS2Q5JR59 1369 aa16.96■□□□□ 0.31
ACSS1-204ENST00000484396 PLEKHD1A6NEE1 506 aa16.96■□□□□ 0.3
ACSS1-204ENST00000484396 KIF27Q86VH2 1401 aa16.96■□□□□ 0.3
ACSS1-204ENST00000484396 PDIA4P13667 645 aaKnown RBP16.94■□□□□ 0.3
ACSS1-204ENST00000484396 PTMSP20962 102 aa16.93■□□□□ 0.3
ACSS1-204ENST00000484396 PNNQ9H307 717 aaKnown RBP16.93■□□□□ 0.3
ACSS1-204ENST00000484396 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
ACSS1-204ENST00000484396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.3
ACSS1-204ENST00000484396 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
ACSS1-204ENST00000484396 EEA1Q15075 1411 aa16.9■□□□□ 0.3
ACSS1-204ENST00000484396 CHIC2Q9UKJ5 165 aa16.89■□□□□ 0.29
ACSS1-204ENST00000484396 IL27Q8NEV9 243 aa16.89■□□□□ 0.29
ACSS1-204ENST00000484396 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
ACSS1-204ENST00000484396 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
ACSS1-204ENST00000484396 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
ACSS1-204ENST00000484396 CLIP1P30622 1438 aa16.86■□□□□ 0.29
ACSS1-204ENST00000484396 ZMYND15Q9H091 742 aa16.85■□□□□ 0.29
ACSS1-204ENST00000484396 USP35Q9P2H5 1018 aa16.83■□□□□ 0.28
ACSS1-204ENST00000484396 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
ACSS1-204ENST00000484396 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
ACSS1-204ENST00000484396 CANXP27824 592 aaKnown RBP16.81■□□□□ 0.28
ACSS1-204ENST00000484396 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
ACSS1-204ENST00000484396 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
ACSS1-204ENST00000484396 ARID3AQ99856 593 aa16.75■□□□□ 0.27
ACSS1-204ENST00000484396 CUX2O14529 1486 aa16.75■□□□□ 0.27
ACSS1-204ENST00000484396 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
ACSS1-204ENST00000484396 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
ACSS1-204ENST00000484396 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
ACSS1-204ENST00000484396 PPP4R2Q9NY27 417 aa16.73■□□□□ 0.27
ACSS1-204ENST00000484396 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
ACSS1-204ENST00000484396 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
ACSS1-204ENST00000484396 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
ACSS1-204ENST00000484396 APPP05067 770 aa16.71■□□□□ 0.27
ACSS1-204ENST00000484396 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
ACSS1-204ENST00000484396 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
ACSS1-204ENST00000484396 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
ACSS1-204ENST00000484396 DNTTIP2Q5QJE6 756 aaKnown RBP16.68■□□□□ 0.26
ACSS1-204ENST00000484396 BECN1Q14457 450 aa16.67■□□□□ 0.26
ACSS1-204ENST00000484396 SOGA1O94964 1423 aa16.67■□□□□ 0.26
ACSS1-204ENST00000484396 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
ACSS1-204ENST00000484396 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
ACSS1-204ENST00000484396 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
ACSS1-204ENST00000484396 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
ACSS1-204ENST00000484396 RRP7BPQ9NSQ0 103 aa16.64■□□□□ 0.25
ACSS1-204ENST00000484396 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
ACSS1-204ENST00000484396 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
ACSS1-204ENST00000484396 RBM10P98175 930 aaKnown RBP16.63■□□□□ 0.25
ACSS1-204ENST00000484396 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
ACSS1-204ENST00000484396 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
ACSS1-204ENST00000484396 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
ACSS1-204ENST00000484396 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
ACSS1-204ENST00000484396 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
ACSS1-204ENST00000484396 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
ACSS1-204ENST00000484396 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
ACSS1-204ENST00000484396 MSNP26038 577 aaKnown RBP16.57■□□□□ 0.24
ACSS1-204ENST00000484396 GSE1Q14687 1217 aa16.56■□□□□ 0.24
ACSS1-204ENST00000484396 MAP7D2Q96T17 732 aa16.55■□□□□ 0.24
ACSS1-204ENST00000484396 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
ACSS1-204ENST00000484396 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
ACSS1-204ENST00000484396 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
ACSS1-204ENST00000484396 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
ACSS1-204ENST00000484396 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
ACSS1-204ENST00000484396 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
ACSS1-204ENST00000484396 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
ACSS1-204ENST00000484396 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
ACSS1-204ENST00000484396 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
ACSS1-204ENST00000484396 B4GALNT3Q6L9W6 998 aa16.49■□□□□ 0.23
ACSS1-204ENST00000484396 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
ACSS1-204ENST00000484396 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
ACSS1-204ENST00000484396 WIZO95785 1651 aa16.47■□□□□ 0.23
ACSS1-204ENST00000484396 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
ACSS1-204ENST00000484396 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
ACSS1-204ENST00000484396 MLECQ14165 292 aa16.46■□□□□ 0.22
ACSS1-204ENST00000484396 RGL3Q3MIN7 710 aa16.46■□□□□ 0.22
ACSS1-204ENST00000484396 PTMAP06454 111 aaKnown RBP16.45■□□□□ 0.22
ACSS1-204ENST00000484396 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
ACSS1-204ENST00000484396 ABCC8Q09428 1581 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms