RNA–Protein interactions for RNA: ENST00000483789.5

CCNL1-224, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 667 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-224ENST00000483789 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
CCNL1-224ENST00000483789 ASTLQ6HA08 431 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-224ENST00000483789 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
CCNL1-224ENST00000483789 ATMINO43313 823 aaPredicted RBP12.01□□□□□ -0.49
CCNL1-224ENST00000483789 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
CCNL1-224ENST00000483789 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
CCNL1-224ENST00000483789 C7P10643 843 aa12□□□□□ -0.49
CCNL1-224ENST00000483789 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
CCNL1-224ENST00000483789 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
CCNL1-224ENST00000483789 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
CCNL1-224ENST00000483789 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CCNL1-224ENST00000483789 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
CCNL1-224ENST00000483789 POTEB2H3BUK9 544 aa11.92□□□□□ -0.5
CCNL1-224ENST00000483789 TIE1P35590 1138 aa11.92□□□□□ -0.5
CCNL1-224ENST00000483789 NUBP1P53384 320 aa11.92□□□□□ -0.5
CCNL1-224ENST00000483789 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
CCNL1-224ENST00000483789 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
CCNL1-224ENST00000483789 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
CCNL1-224ENST00000483789 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
CCNL1-224ENST00000483789 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
CCNL1-224ENST00000483789 PCDHB13Q9Y5F0 798 aa11.85□□□□□ -0.51
CCNL1-224ENST00000483789 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
CCNL1-224ENST00000483789 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
CCNL1-224ENST00000483789 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
CCNL1-224ENST00000483789 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
CCNL1-224ENST00000483789 IER5LQ5T953 404 aa11.76□□□□□ -0.53
CCNL1-224ENST00000483789 SEC24BO95487 1268 aa11.75□□□□□ -0.53
CCNL1-224ENST00000483789 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
CCNL1-224ENST00000483789 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
CCNL1-224ENST00000483789 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-224ENST00000483789 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
CCNL1-224ENST00000483789 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
CCNL1-224ENST00000483789 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
CCNL1-224ENST00000483789 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
CCNL1-224ENST00000483789 GSE1Q14687 1217 aa11.69□□□□□ -0.54
CCNL1-224ENST00000483789 PYGBP11216 843 aa11.67□□□□□ -0.54
CCNL1-224ENST00000483789 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
CCNL1-224ENST00000483789 POTEMA6NI47 508 aa11.63□□□□□ -0.55
CCNL1-224ENST00000483789 PLCG2P16885 1265 aa11.61□□□□□ -0.55
CCNL1-224ENST00000483789 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
CCNL1-224ENST00000483789 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
CCNL1-224ENST00000483789 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
CCNL1-224ENST00000483789 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
CCNL1-224ENST00000483789 PCDH10Q9P2E7 1040 aa11.56□□□□□ -0.56
CCNL1-224ENST00000483789 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
CCNL1-224ENST00000483789 FAM163AQ96GL9 167 aaPredicted RBP11.55□□□□□ -0.56
CCNL1-224ENST00000483789 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
CCNL1-224ENST00000483789 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
CCNL1-224ENST00000483789 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
CCNL1-224ENST00000483789 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
CCNL1-224ENST00000483789 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-224ENST00000483789 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
CCNL1-224ENST00000483789 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
CCNL1-224ENST00000483789 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
CCNL1-224ENST00000483789 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
CCNL1-224ENST00000483789 PSEN1P49768 467 aa11.44□□□□□ -0.58
CCNL1-224ENST00000483789 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
CCNL1-224ENST00000483789 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.41□□□□□ -0.58
CCNL1-224ENST00000483789 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
CCNL1-224ENST00000483789 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
CCNL1-224ENST00000483789 SNPHO15079 494 aa11.37□□□□□ -0.59
CCNL1-224ENST00000483789 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
CCNL1-224ENST00000483789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.592e-10■■□□□ 13
CCNL1-224ENST00000483789 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
CCNL1-224ENST00000483789 ST18O60284 1047 aa11.31□□□□□ -0.6
CCNL1-224ENST00000483789 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
CCNL1-224ENST00000483789 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
CCNL1-224ENST00000483789 CABP2Q9NPB3 220 aa11.28□□□□□ -0.6
CCNL1-224ENST00000483789 G3V3G9 751 aa11.25□□□□□ -0.61
CCNL1-224ENST00000483789 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
CCNL1-224ENST00000483789 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
CCNL1-224ENST00000483789 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
CCNL1-224ENST00000483789 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
CCNL1-224ENST00000483789 EFCAB3Q8N7B9 438 aa11.14□□□□□ -0.63
CCNL1-224ENST00000483789 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
CCNL1-224ENST00000483789 SOX12O15370 315 aa11.11□□□□□ -0.63
CCNL1-224ENST00000483789 MARVELD3Q96A59 401 aa11.11□□□□□ -0.63
CCNL1-224ENST00000483789 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
CCNL1-224ENST00000483789 EMP3P54852 163 aa11.09□□□□□ -0.63
CCNL1-224ENST00000483789 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
CCNL1-224ENST00000483789 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
CCNL1-224ENST00000483789 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
CCNL1-224ENST00000483789 DOK7Q18PE1 504 aa11.03□□□□□ -0.64
CCNL1-224ENST00000483789 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
CCNL1-224ENST00000483789 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
CCNL1-224ENST00000483789 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
CCNL1-224ENST00000483789 HOXB3P14651 431 aaPredicted RBP11□□□□□ -0.65
CCNL1-224ENST00000483789 FAM205CA6NFA0 338 aa10.99□□□□□ -0.65
CCNL1-224ENST00000483789 HS3ST6Q96QI5 342 aa10.99□□□□□ -0.65
CCNL1-224ENST00000483789 HOXB1P14653 301 aaPredicted RBP10.97□□□□□ -0.65
CCNL1-224ENST00000483789 NLRP6P59044 892 aa10.97□□□□□ -0.65
CCNL1-224ENST00000483789 SPNS2Q8IVW8 549 aa10.97□□□□□ -0.65
CCNL1-224ENST00000483789 PHF8Q9UPP1 1060 aa10.97□□□□□ -0.65
CCNL1-224ENST00000483789 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
CCNL1-224ENST00000483789 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
CCNL1-224ENST00000483789 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
CCNL1-224ENST00000483789 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
CCNL1-224ENST00000483789 ZSWIM6Q9HCJ5 1215 aa10.93□□□□□ -0.66
CCNL1-224ENST00000483789 STK24Q9Y6E0 443 aa10.93□□□□□ -0.66
CCNL1-224ENST00000483789 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms