RNA–Protein interactions for RNA: ENST00000483539.2

OBSCN-207, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 5

Gene OBSCN, Length 4,779 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-207ENST00000483539 CCDC136Q96JN2 1154 aa17.94■□□□□ 0.46
OBSCN-207ENST00000483539 CANXP27824 592 aaKnown RBP17.93■□□□□ 0.46
OBSCN-207ENST00000483539 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
OBSCN-207ENST00000483539 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
OBSCN-207ENST00000483539 ARID4BQ4LE39 1312 aaPredicted RBP17.92■□□□□ 0.46
OBSCN-207ENST00000483539 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
OBSCN-207ENST00000483539 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
OBSCN-207ENST00000483539 MRS2Q9HD23 443 aa17.91■□□□□ 0.46
OBSCN-207ENST00000483539 CHGAP10645 457 aaKnown RBP17.9■□□□□ 0.46
OBSCN-207ENST00000483539 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
OBSCN-207ENST00000483539 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
OBSCN-207ENST00000483539 SOGA1O94964 1423 aa17.88■□□□□ 0.45
OBSCN-207ENST00000483539 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
OBSCN-207ENST00000483539 TIMELESSQ9UNS1 1208 aa17.86■□□□□ 0.45
OBSCN-207ENST00000483539 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
OBSCN-207ENST00000483539 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
OBSCN-207ENST00000483539 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.44
OBSCN-207ENST00000483539 BCL11AQ9H165 835 aa17.83■□□□□ 0.44
OBSCN-207ENST00000483539 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.8■□□□□ 0.44
OBSCN-207ENST00000483539 VPS8Q8N3P4 1428 aa17.79■□□□□ 0.44
OBSCN-207ENST00000483539 UPF2Q9HAU5 1272 aaKnown RBP17.79■□□□□ 0.44
OBSCN-207ENST00000483539 NEFMP07197 916 aa17.77■□□□□ 0.43
OBSCN-207ENST00000483539 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
OBSCN-207ENST00000483539 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
OBSCN-207ENST00000483539 CCER2I3L3R5 266 aa17.74■□□□□ 0.43
OBSCN-207ENST00000483539 NBR1Q14596 966 aa17.73■□□□□ 0.43
OBSCN-207ENST00000483539 CUX2O14529 1486 aa17.73■□□□□ 0.43
OBSCN-207ENST00000483539 HIRIP3Q9BW71 556 aaPredicted RBP17.72■□□□□ 0.43
OBSCN-207ENST00000483539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
OBSCN-207ENST00000483539 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
OBSCN-207ENST00000483539 CARMIL1Q5VZK9 1371 aa17.71■□□□□ 0.43
OBSCN-207ENST00000483539 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.42
OBSCN-207ENST00000483539 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
OBSCN-207ENST00000483539 DDRGK1Q96HY6 314 aa17.69■□□□□ 0.42
OBSCN-207ENST00000483539 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
OBSCN-207ENST00000483539 ANP32BQ92688 251 aaKnown RBP17.67■□□□□ 0.42
OBSCN-207ENST00000483539 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
OBSCN-207ENST00000483539 PPP1R15AO75807 674 aaPredicted RBP17.66■□□□□ 0.42
OBSCN-207ENST00000483539 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
OBSCN-207ENST00000483539 ERICH6BQ5W0A0 696 aa17.64■□□□□ 0.41
OBSCN-207ENST00000483539 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
OBSCN-207ENST00000483539 CARMIL2Q6F5E8 1435 aa17.63■□□□□ 0.41
OBSCN-207ENST00000483539 RRP7BPQ9NSQ0 103 aa17.62■□□□□ 0.41
OBSCN-207ENST00000483539 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
OBSCN-207ENST00000483539 SETD5Q9C0A6 1442 aa17.6■□□□□ 0.41
OBSCN-207ENST00000483539 SIN3AQ96ST3 1273 aa17.59■□□□□ 0.41
OBSCN-207ENST00000483539 PPM1GO15355 546 aaPredicted RBP17.59■□□□□ 0.41
OBSCN-207ENST00000483539 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
OBSCN-207ENST00000483539 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
OBSCN-207ENST00000483539 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
OBSCN-207ENST00000483539 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
OBSCN-207ENST00000483539 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.4
OBSCN-207ENST00000483539 BECN1Q14457 450 aa17.52■□□□□ 0.4
OBSCN-207ENST00000483539 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.4
OBSCN-207ENST00000483539 RBM19Q9Y4C8 960 aaKnown RBP17.52■□□□□ 0.4
OBSCN-207ENST00000483539 KDM2AQ9Y2K7 1162 aa17.52■□□□□ 0.39
OBSCN-207ENST00000483539 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
OBSCN-207ENST00000483539 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
OBSCN-207ENST00000483539 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
OBSCN-207ENST00000483539 RAPGEF2Q9Y4G8 1499 aa17.46■□□□□ 0.39
OBSCN-207ENST00000483539 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
OBSCN-207ENST00000483539 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
OBSCN-207ENST00000483539 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
OBSCN-207ENST00000483539 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
OBSCN-207ENST00000483539 HDGFP51858 240 aaKnown RBP17.44■□□□□ 0.38
OBSCN-207ENST00000483539 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
OBSCN-207ENST00000483539 MLECQ14165 292 aa17.42■□□□□ 0.38
OBSCN-207ENST00000483539 KANK4Q5T7N3 995 aaPredicted RBP17.42■□□□□ 0.38
OBSCN-207ENST00000483539 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
OBSCN-207ENST00000483539 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
OBSCN-207ENST00000483539 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
OBSCN-207ENST00000483539 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.37
OBSCN-207ENST00000483539 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
OBSCN-207ENST00000483539 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
OBSCN-207ENST00000483539 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
OBSCN-207ENST00000483539 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
OBSCN-207ENST00000483539 KNSTRNQ9Y448 316 aa17.35■□□□□ 0.37
OBSCN-207ENST00000483539 HSPA5P11021 654 aaKnown RBP17.34■□□□□ 0.37
OBSCN-207ENST00000483539 KANK1Q14678 1352 aa17.31■□□□□ 0.36
OBSCN-207ENST00000483539 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
OBSCN-207ENST00000483539 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
OBSCN-207ENST00000483539 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
OBSCN-207ENST00000483539 A0A0G2JS52 829 aa17.29■□□□□ 0.36
OBSCN-207ENST00000483539 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
OBSCN-207ENST00000483539 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
OBSCN-207ENST00000483539 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
OBSCN-207ENST00000483539 RTN4Q9NQC3 1192 aaKnown RBP17.27■□□□□ 0.35
OBSCN-207ENST00000483539 CFTRP13569 1480 aa17.26■□□□□ 0.35
OBSCN-207ENST00000483539 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
OBSCN-207ENST00000483539 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
OBSCN-207ENST00000483539 KIF21BO75037 1637 aa17.24■□□□□ 0.35
OBSCN-207ENST00000483539 RGL3Q3MIN7 710 aa17.24■□□□□ 0.35
OBSCN-207ENST00000483539 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
OBSCN-207ENST00000483539 IGF1RP08069 1367 aa17.23■□□□□ 0.35
OBSCN-207ENST00000483539 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
OBSCN-207ENST00000483539 GGT6Q6P531 493 aa17.22■□□□□ 0.35
OBSCN-207ENST00000483539 ARXQ96QS3 562 aa17.22■□□□□ 0.35
OBSCN-207ENST00000483539 MS4A1P11836 297 aa17.21■□□□□ 0.35
OBSCN-207ENST00000483539 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.35
OBSCN-207ENST00000483539 TMF1P82094 1093 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms