RNA–Protein interactions for RNA: ENST00000482299.1

NDUFA4-204, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 606 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-204ENST00000482299 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
NDUFA4-204ENST00000482299 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
NDUFA4-204ENST00000482299 NUBP1P53384 320 aa12.37□□□□□ -0.43
NDUFA4-204ENST00000482299 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
NDUFA4-204ENST00000482299 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
NDUFA4-204ENST00000482299 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
NDUFA4-204ENST00000482299 KIF12Q96FN5 646 aa12.33□□□□□ -0.44
NDUFA4-204ENST00000482299 MAP3K13O43283 966 aa12.26□□□□□ -0.45
NDUFA4-204ENST00000482299 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
NDUFA4-204ENST00000482299 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
NDUFA4-204ENST00000482299 LHX8Q68G74 356 aa12.25□□□□□ -0.45
NDUFA4-204ENST00000482299 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
NDUFA4-204ENST00000482299 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
NDUFA4-204ENST00000482299 GSE1Q14687 1217 aa12.21□□□□□ -0.45
NDUFA4-204ENST00000482299 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
NDUFA4-204ENST00000482299 TIE1P35590 1138 aa12.18□□□□□ -0.46
NDUFA4-204ENST00000482299 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
NDUFA4-204ENST00000482299 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
NDUFA4-204ENST00000482299 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
NDUFA4-204ENST00000482299 BMP2KQ9NSY1 1161 aaPredicted RBP12.14□□□□□ -0.47
NDUFA4-204ENST00000482299 C7P10643 843 aa12.13□□□□□ -0.47
NDUFA4-204ENST00000482299 PYGBP11216 843 aa12.13□□□□□ -0.47
NDUFA4-204ENST00000482299 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
NDUFA4-204ENST00000482299 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
NDUFA4-204ENST00000482299 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
NDUFA4-204ENST00000482299 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
NDUFA4-204ENST00000482299 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
NDUFA4-204ENST00000482299 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
NDUFA4-204ENST00000482299 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
NDUFA4-204ENST00000482299 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
NDUFA4-204ENST00000482299 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
NDUFA4-204ENST00000482299 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
NDUFA4-204ENST00000482299 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
NDUFA4-204ENST00000482299 IER5LQ5T953 404 aa12□□□□□ -0.49
NDUFA4-204ENST00000482299 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
NDUFA4-204ENST00000482299 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
NDUFA4-204ENST00000482299 SEC24BO95487 1268 aa11.97□□□□□ -0.49
NDUFA4-204ENST00000482299 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
NDUFA4-204ENST00000482299 MAMSTRQ6ZN01 415 aa11.94□□□□□ -0.5
NDUFA4-204ENST00000482299 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
NDUFA4-204ENST00000482299 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
NDUFA4-204ENST00000482299 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
NDUFA4-204ENST00000482299 PDAP1Q13442 181 aaKnown RBP11.88□□□□□ -0.51
NDUFA4-204ENST00000482299 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
NDUFA4-204ENST00000482299 PLCG2P16885 1265 aa11.87□□□□□ -0.51
NDUFA4-204ENST00000482299 PSEN1P49768 467 aa11.87□□□□□ -0.51
NDUFA4-204ENST00000482299 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
NDUFA4-204ENST00000482299 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
NDUFA4-204ENST00000482299 MKRN3Q13064 507 aaKnown RBP11.83□□□□□ -0.52
NDUFA4-204ENST00000482299 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
NDUFA4-204ENST00000482299 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
NDUFA4-204ENST00000482299 OCEL1Q9H607 264 aa11.81□□□□□ -0.52
NDUFA4-204ENST00000482299 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
NDUFA4-204ENST00000482299 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
NDUFA4-204ENST00000482299 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
NDUFA4-204ENST00000482299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
NDUFA4-204ENST00000482299 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
NDUFA4-204ENST00000482299 PDCD7Q8N8D1 485 aaKnown RBP11.68□□□□□ -0.54
NDUFA4-204ENST00000482299 RNF25Q96BH1 459 aaPredicted RBP11.67□□□□□ -0.54
NDUFA4-204ENST00000482299 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
NDUFA4-204ENST00000482299 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
NDUFA4-204ENST00000482299 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
NDUFA4-204ENST00000482299 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
NDUFA4-204ENST00000482299 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
NDUFA4-204ENST00000482299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
NDUFA4-204ENST00000482299 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
NDUFA4-204ENST00000482299 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
NDUFA4-204ENST00000482299 G3V3G9 751 aa11.6□□□□□ -0.55
NDUFA4-204ENST00000482299 EFCAB3Q8N7B9 438 aa11.59□□□□□ -0.55
NDUFA4-204ENST00000482299 PKD2Q13563 968 aa11.58□□□□□ -0.56
NDUFA4-204ENST00000482299 SOX12O15370 315 aa11.56□□□□□ -0.56
NDUFA4-204ENST00000482299 FAM163AQ96GL9 167 aaPredicted RBP11.55□□□□□ -0.56
NDUFA4-204ENST00000482299 POTEMA6NI47 508 aa11.54□□□□□ -0.56
NDUFA4-204ENST00000482299 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
NDUFA4-204ENST00000482299 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
NDUFA4-204ENST00000482299 STK25O00506 426 aa11.51□□□□□ -0.57
NDUFA4-204ENST00000482299 SNPHO15079 494 aa11.51□□□□□ -0.57
NDUFA4-204ENST00000482299 DPY19L2Q6NUT2 758 aa11.51□□□□□ -0.57
NDUFA4-204ENST00000482299 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
NDUFA4-204ENST00000482299 RGL2O15211 777 aa11.5□□□□□ -0.57
NDUFA4-204ENST00000482299 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
NDUFA4-204ENST00000482299 NLRP6P59044 892 aa11.45□□□□□ -0.58
NDUFA4-204ENST00000482299 PHF8Q9UPP1 1060 aa11.45□□□□□ -0.58
NDUFA4-204ENST00000482299 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
NDUFA4-204ENST00000482299 TMEM121BQ9BXQ6 578 aaPredicted RBP11.43□□□□□ -0.58
NDUFA4-204ENST00000482299 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
NDUFA4-204ENST00000482299 PCDH10Q9P2E7 1040 aa11.4□□□□□ -0.58
NDUFA4-204ENST00000482299 ST18O60284 1047 aa11.39□□□□□ -0.59
NDUFA4-204ENST00000482299 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
NDUFA4-204ENST00000482299 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
NDUFA4-204ENST00000482299 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
NDUFA4-204ENST00000482299 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
NDUFA4-204ENST00000482299 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
NDUFA4-204ENST00000482299 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
NDUFA4-204ENST00000482299 CHGAP10645 457 aaKnown RBP11.27□□□□□ -0.61
NDUFA4-204ENST00000482299 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
NDUFA4-204ENST00000482299 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
NDUFA4-204ENST00000482299 EMP3P54852 163 aa11.23□□□□□ -0.61
NDUFA4-204ENST00000482299 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
NDUFA4-204ENST00000482299 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms