RNA–Protein interactions for RNA: ENST00000480884.5

CCDC66-217, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-217ENST00000480884 PROM2Q8N271 834 aa6.81□□□□□ -1.32
CCDC66-217ENST00000480884 FXR2P51116 673 aaKnown RBP eCLIP6.8□□□□□ -1.32
CCDC66-217ENST00000480884 ECM2O94769 699 aaPredicted RBP6.78□□□□□ -1.32
CCDC66-217ENST00000480884 POTEMA6NI47 508 aa6.77□□□□□ -1.33
CCDC66-217ENST00000480884 SPDYE4A6NLX3 237 aa6.76□□□□□ -1.33
CCDC66-217ENST00000480884 BRPF1P55201 1214 aaPredicted RBP6.76□□□□□ -1.33
CCDC66-217ENST00000480884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.74□□□□□ -1.33
CCDC66-217ENST00000480884 HNRNPUL2Q1KMD3 747 aaKnown RBP6.74□□□□□ -1.33
CCDC66-217ENST00000480884 LOC105371045A0A1W2PR82 267 aa6.72□□□□□ -1.33
CCDC66-217ENST00000480884 GABBR2O75899 941 aa6.72□□□□□ -1.33
CCDC66-217ENST00000480884 POTEGQ6S5H5 508 aa6.71□□□□□ -1.33
CCDC66-217ENST00000480884 CHGAP10645 457 aaKnown RBP6.69□□□□□ -1.34
CCDC66-217ENST00000480884 EVX2Q03828 476 aa6.69□□□□□ -1.34
CCDC66-217ENST00000480884 CLCN6P51797 869 aa6.68□□□□□ -1.34
CCDC66-217ENST00000480884 REM2Q8IYK8 340 aaPredicted RBP6.68□□□□□ -1.34
CCDC66-217ENST00000480884 MKRN4PQ13434 485 aaPredicted RBP6.67□□□□□ -1.34
CCDC66-217ENST00000480884 C1orf115Q9H7X2 142 aa6.65□□□□□ -1.34
CCDC66-217ENST00000480884 C19orf67A6NJJ6 358 aa6.64□□□□□ -1.35
CCDC66-217ENST00000480884 ARID3AQ99856 593 aa6.61□□□□□ -1.35
CCDC66-217ENST00000480884 NKX1-1Q15270 411 aaPredicted RBP6.61□□□□□ -1.35
CCDC66-217ENST00000480884 SPOCK2Q92563 424 aa6.61□□□□□ -1.35
CCDC66-217ENST00000480884 NECTIN2Q92692 538 aa6.6□□□□□ -1.35
CCDC66-217ENST00000480884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCDC66-217ENST00000480884 PELP1Q8IZL8 1130 aaKnown RBP6.59□□□□□ -1.35
CCDC66-217ENST00000480884 LMOD2Q6P5Q4 547 aa6.58□□□□□ -1.36
CCDC66-217ENST00000480884 PITPNM1O00562 1244 aa6.57□□□□□ -1.36
CCDC66-217ENST00000480884 NEUROD2Q15784 382 aa6.57□□□□□ -1.36
CCDC66-217ENST00000480884 SAMD1Q6SPF0 538 aaPredicted RBP6.56□□□□□ -1.36
CCDC66-217ENST00000480884 ZBTB12Q9Y330 459 aaPredicted RBP6.55□□□□□ -1.36
CCDC66-217ENST00000480884 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
CCDC66-217ENST00000480884 GTPBP6O43824 516 aaPredicted RBP6.54□□□□□ -1.36
CCDC66-217ENST00000480884 IGSF3O75054 1194 aa6.54□□□□□ -1.36
CCDC66-217ENST00000480884 HS6ST3Q8IZP7 471 aa6.53□□□□□ -1.36
CCDC66-217ENST00000480884 ARID3CA6NKF2 412 aa6.51□□□□□ -1.37
CCDC66-217ENST00000480884 RNF25Q96BH1 459 aaPredicted RBP6.51□□□□□ -1.37
CCDC66-217ENST00000480884 SLC24A3Q9HC58 644 aa6.51□□□□□ -1.37
CCDC66-217ENST00000480884 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
CCDC66-217ENST00000480884 CCDC9Q9Y3X0 531 aaKnown RBP6.49□□□□□ -1.37
CCDC66-217ENST00000480884 ZC3H15Q8WU90 426 aaKnown RBP6.48□□□□□ -1.37
CCDC66-217ENST00000480884 SOCS7O14512 581 aa6.48□□□□□ -1.37
CCDC66-217ENST00000480884 KCNV2Q8TDN2 545 aa6.48□□□□□ -1.37
CCDC66-217ENST00000480884 TTBK1Q5TCY1 1321 aaPredicted RBP6.47□□□□□ -1.37
CCDC66-217ENST00000480884 EIF5BO60841 1220 aaKnown RBP6.46□□□□□ -1.38
CCDC66-217ENST00000480884 POTEIP0CG38 1075 aa6.44□□□□□ -1.38
CCDC66-217ENST00000480884 OTUD5Q96G74 571 aa6.44□□□□□ -1.38
CCDC66-217ENST00000480884 PRKAR2AP13861 404 aaKnown RBP6.43□□□□□ -1.38
CCDC66-217ENST00000480884 DCBLD2Q96PD2 775 aa6.42□□□□□ -1.38
CCDC66-217ENST00000480884 CIZ1Q9ULV3 898 aaPredicted RBP6.42□□□□□ -1.38
CCDC66-217ENST00000480884 ZBTB7CA1YPR0 619 aa6.42□□□□□ -1.38
CCDC66-217ENST00000480884 ZNF428Q96B54 188 aa6.42□□□□□ -1.38
CCDC66-217ENST00000480884 PDIA4P13667 645 aaKnown RBP6.41□□□□□ -1.38
CCDC66-217ENST00000480884 GPBP1L1Q9HC44 474 aaPredicted RBP6.41□□□□□ -1.38
CCDC66-217ENST00000480884 APBB1O00213 710 aa6.4□□□□□ -1.38
CCDC66-217ENST00000480884 POLA2Q14181 598 aa6.4□□□□□ -1.39
CCDC66-217ENST00000480884 MYT1Q01538 1121 aa6.39□□□□□ -1.39
CCDC66-217ENST00000480884 MKRN3Q13064 507 aaKnown RBP6.39□□□□□ -1.39
CCDC66-217ENST00000480884 CADPS2Q86UW7 1296 aa6.38□□□□□ -1.39
CCDC66-217ENST00000480884 PLEKHG5O94827 1062 aa6.37□□□□□ -1.39
CCDC66-217ENST00000480884 IL27Q8NEV9 243 aa6.37□□□□□ -1.39
CCDC66-217ENST00000480884 MAMSTRQ6ZN01 415 aa6.37□□□□□ -1.39
CCDC66-217ENST00000480884 P3H3Q8IVL6 736 aa6.36□□□□□ -1.39
CCDC66-217ENST00000480884 RGS22Q8NE09 1264 aa6.36□□□□□ -1.39
CCDC66-217ENST00000480884 KCTD17Q8N5Z5 321 aa6.35□□□□□ -1.39
CCDC66-217ENST00000480884 TRIM41Q8WV44 630 aa6.35□□□□□ -1.39
CCDC66-217ENST00000480884 SHROOM4Q9ULL8 1493 aa6.35□□□□□ -1.39
CCDC66-217ENST00000480884 PLCD3Q8N3E9 789 aa6.35□□□□□ -1.39
CCDC66-217ENST00000480884 ZMYND10O75800 440 aa6.33□□□□□ -1.4
CCDC66-217ENST00000480884 MTMR7Q9Y216 660 aa6.33□□□□□ -1.4
CCDC66-217ENST00000480884 RAD21O60216 631 aa6.33□□□□□ -1.4
CCDC66-217ENST00000480884 CCDC82Q8N4S0 544 aa6.33□□□□□ -1.4
CCDC66-217ENST00000480884 SEMA3EO15041 775 aa6.31□□□□□ -1.4
CCDC66-217ENST00000480884 FOXD4L5Q5VV16 416 aaPredicted RBP6.31□□□□□ -1.4
CCDC66-217ENST00000480884 FOXD4L4Q8WXT5 416 aaPredicted RBP6.31□□□□□ -1.4
CCDC66-217ENST00000480884 MIER1Q8N108 512 aa6.29□□□□□ -1.4
CCDC66-217ENST00000480884 STK25O00506 426 aa6.28□□□□□ -1.4
CCDC66-217ENST00000480884 SPDYE1Q8NFV5 336 aaPredicted RBP6.27□□□□□ -1.41
CCDC66-217ENST00000480884 CDAN1Q8IWY9 1227 aa6.26□□□□□ -1.41
CCDC66-217ENST00000480884 CHMP4AQ9BY43 222 aa6.26□□□□□ -1.41
CCDC66-217ENST00000480884 KDM4CQ9H3R0 1056 aa6.26□□□□□ -1.41
CCDC66-217ENST00000480884 TESPA1A2RU30 521 aaPredicted RBP6.26□□□□□ -1.41
CCDC66-217ENST00000480884 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
CCDC66-217ENST00000480884 AEBP1Q8IUX7 1158 aa6.25□□□□□ -1.41
CCDC66-217ENST00000480884 CLUAP1Q96AJ1 413 aa6.25□□□□□ -1.41
CCDC66-217ENST00000480884 RIOK3O14730 519 aaKnown RBP6.24□□□□□ -1.41
CCDC66-217ENST00000480884 BARGINQ6ZT62 677 aa6.23□□□□□ -1.41
CCDC66-217ENST00000480884 FAM163AQ96GL9 167 aaPredicted RBP6.23□□□□□ -1.41
CCDC66-217ENST00000480884 ONECUT3O60422 494 aaPredicted RBP6.23□□□□□ -1.41
CCDC66-217ENST00000480884 LMTK3Q96Q04 1460 aa6.22□□□□□ -1.41
CCDC66-217ENST00000480884 TRAIPQ9BWF2 469 aa6.22□□□□□ -1.41
CCDC66-217ENST00000480884 STAG3Q9UJ98 1225 aa6.22□□□□□ -1.41
CCDC66-217ENST00000480884 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.41
CCDC66-217ENST00000480884 MMRN1Q13201 1228 aa6.21□□□□□ -1.41
CCDC66-217ENST00000480884 CDK11AQ9UQ88 783 aaPredicted RBP6.21□□□□□ -1.41
CCDC66-217ENST00000480884 FAM117AQ9C073 453 aa6.21□□□□□ -1.42
CCDC66-217ENST00000480884 WDR70Q9NW82 654 aa6.21□□□□□ -1.42
CCDC66-217ENST00000480884 MFAP1P55081 439 aaKnown RBP6.2□□□□□ -1.42
CCDC66-217ENST00000480884 BCL11BQ9C0K0 894 aaPredicted RBP6.2□□□□□ -1.42
CCDC66-217ENST00000480884 OSCARQ8IYS5 282 aa6.19□□□□□ -1.42
CCDC66-217ENST00000480884 TRAK2O60296 914 aa6.18□□□□□ -1.42
CCDC66-217ENST00000480884 CD44P16070 742 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms