RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 GALR2O43603 387 aaPredicted RBP10.57□□□□□ -0.72
FN1-221ENST00000480737 TSPYL2Q9H2G4 693 aaPredicted RBP10.56□□□□□ -0.72
FN1-221ENST00000480737 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
FN1-221ENST00000480737 MS4A3Q96HJ5 214 aa10.51□□□□□ -0.73
FN1-221ENST00000480737 DCBLD2Q96PD2 775 aa10.48□□□□□ -0.73
FN1-221ENST00000480737 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
FN1-221ENST00000480737 SGIP1Q9BQI5 828 aa10.46□□□□□ -0.73
FN1-221ENST00000480737 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
FN1-221ENST00000480737 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
FN1-221ENST00000480737 MAP3K13O43283 966 aa10.43□□□□□ -0.74
FN1-221ENST00000480737 ATMINO43313 823 aaPredicted RBP10.39□□□□□ -0.75
FN1-221ENST00000480737 KLHL34Q8N239 644 aa10.39□□□□□ -0.75
FN1-221ENST00000480737 TIE1P35590 1138 aa10.37□□□□□ -0.75
FN1-221ENST00000480737 GSE1Q14687 1217 aa10.36□□□□□ -0.75
FN1-221ENST00000480737 PELP1Q8IZL8 1130 aaKnown RBP10.36□□□□□ -0.75
FN1-221ENST00000480737 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
FN1-221ENST00000480737 LHX8Q68G74 356 aa10.35□□□□□ -0.75
FN1-221ENST00000480737 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
FN1-221ENST00000480737 BMP2KQ9NSY1 1161 aaPredicted RBP10.35□□□□□ -0.75
FN1-221ENST00000480737 PCDHB13Q9Y5F0 798 aa10.35□□□□□ -0.75
FN1-221ENST00000480737 DCAF8Q5TAQ9 597 aa10.34□□□□□ -0.75
FN1-221ENST00000480737 CHRM1P11229 460 aaPredicted RBP10.32□□□□□ -0.76
FN1-221ENST00000480737 IFNL1Q8IU54 200 aa10.32□□□□□ -0.76
FN1-221ENST00000480737 ATN1P54259 1190 aaPredicted RBP10.31□□□□□ -0.76
FN1-221ENST00000480737 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
FN1-221ENST00000480737 PYGBP11216 843 aa10.29□□□□□ -0.76
FN1-221ENST00000480737 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
FN1-221ENST00000480737 C7P10643 843 aa10.27□□□□□ -0.77
FN1-221ENST00000480737 METRNQ9UJH8 293 aa10.26□□□□□ -0.77
FN1-221ENST00000480737 POTEB2H3BUK9 544 aa10.23□□□□□ -0.77
FN1-221ENST00000480737 ZNF467Q7Z7K2 595 aaPredicted RBP10.22□□□□□ -0.77
FN1-221ENST00000480737 IER5LQ5T953 404 aa10.21□□□□□ -0.77
FN1-221ENST00000480737 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
FN1-221ENST00000480737 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
FN1-221ENST00000480737 TMEM106CQ9BVX2 250 aa10.19□□□□□ -0.78
FN1-221ENST00000480737 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
FN1-221ENST00000480737 TRIM35Q9UPQ4 493 aa10.19□□□□□ -0.78
FN1-221ENST00000480737 CIZ1Q9ULV3 898 aaPredicted RBP10.16□□□□□ -0.78
FN1-221ENST00000480737 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
FN1-221ENST00000480737 OTUD5Q96G74 571 aa10.14□□□□□ -0.79
FN1-221ENST00000480737 COLQQ9Y215 455 aaPredicted RBP10.11□□□□□ -0.79
FN1-221ENST00000480737 IRX5P78411 483 aaPredicted RBP10.1□□□□□ -0.79
FN1-221ENST00000480737 PSEN1P49768 467 aa10.09□□□□□ -0.79
FN1-221ENST00000480737 PDAP1Q13442 181 aaKnown RBP10.09□□□□□ -0.79
FN1-221ENST00000480737 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
FN1-221ENST00000480737 ILDR1Q86SU0 546 aaPredicted RBP10.05□□□□□ -0.8
FN1-221ENST00000480737 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
FN1-221ENST00000480737 SEC24BO95487 1268 aa10.04□□□□□ -0.8
FN1-221ENST00000480737 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
FN1-221ENST00000480737 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
FN1-221ENST00000480737 PLCG2P16885 1265 aa10□□□□□ -0.81
FN1-221ENST00000480737 PDCD7Q8N8D1 485 aaKnown RBP10□□□□□ -0.81
FN1-221ENST00000480737 SCUBE2Q9NQ36 999 aa9.99□□□□□ -0.81
FN1-221ENST00000480737 PKD2Q13563 968 aa9.97□□□□□ -0.81
FN1-221ENST00000480737 VGFO15240 615 aaPredicted RBP9.96□□□□□ -0.82
FN1-221ENST00000480737 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.82
FN1-221ENST00000480737 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
FN1-221ENST00000480737 CABP2Q9NPB3 220 aa9.93□□□□□ -0.82
FN1-221ENST00000480737 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
FN1-221ENST00000480737 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
FN1-221ENST00000480737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.82
FN1-221ENST00000480737 ECM2O94769 699 aaPredicted RBP9.9□□□□□ -0.82
FN1-221ENST00000480737 TAOK2Q9UL54 1235 aa9.88□□□□□ -0.83
FN1-221ENST00000480737 EFCAB3Q8N7B9 438 aa9.86□□□□□ -0.83
FN1-221ENST00000480737 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
FN1-221ENST00000480737 RGL2O15211 777 aa9.85□□□□□ -0.83
FN1-221ENST00000480737 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
FN1-221ENST00000480737 SOX12O15370 315 aa9.83□□□□□ -0.84
FN1-221ENST00000480737 DPY19L2Q6NUT2 758 aa9.81□□□□□ -0.84
FN1-221ENST00000480737 SLAIN1Q8ND83 568 aa9.81□□□□□ -0.84
FN1-221ENST00000480737 TMEM121BQ9BXQ6 578 aaPredicted RBP9.81□□□□□ -0.84
FN1-221ENST00000480737 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
FN1-221ENST00000480737 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.8□□□□□ -0.84
FN1-221ENST00000480737 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
FN1-221ENST00000480737 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
FN1-221ENST00000480737 FBXO22Q8NEZ5 403 aa9.77□□□□□ -0.85
FN1-221ENST00000480737 STK25O00506 426 aa9.76□□□□□ -0.85
FN1-221ENST00000480737 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
FN1-221ENST00000480737 PHF8Q9UPP1 1060 aa9.75□□□□□ -0.85
FN1-221ENST00000480737 STK24Q9Y6E0 443 aa9.75□□□□□ -0.85
FN1-221ENST00000480737 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
FN1-221ENST00000480737 NLRP6P59044 892 aa9.72□□□□□ -0.85
FN1-221ENST00000480737 POTEMA6NI47 508 aa9.71□□□□□ -0.86
FN1-221ENST00000480737 MICALL2Q8IY33 904 aa9.71□□□□□ -0.86
FN1-221ENST00000480737 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.86
FN1-221ENST00000480737 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
FN1-221ENST00000480737 DNAJC5Q9H3Z4 198 aa9.7□□□□□ -0.86
FN1-221ENST00000480737 FAM163AQ96GL9 167 aaPredicted RBP9.69□□□□□ -0.86
FN1-221ENST00000480737 G3V3G9 751 aa9.68□□□□□ -0.86
FN1-221ENST00000480737 SNPHO15079 494 aa9.68□□□□□ -0.86
FN1-221ENST00000480737 ST18O60284 1047 aa9.66□□□□□ -0.86
FN1-221ENST00000480737 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
FN1-221ENST00000480737 PCDH10Q9P2E7 1040 aa9.62□□□□□ -0.87
FN1-221ENST00000480737 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
FN1-221ENST00000480737 KIF3CO14782 793 aa9.56□□□□□ -0.88
FN1-221ENST00000480737 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
FN1-221ENST00000480737 NKX1-1Q15270 411 aaPredicted RBP9.55□□□□□ -0.88
FN1-221ENST00000480737 PPP1R37O75864 691 aa9.54□□□□□ -0.88
FN1-221ENST00000480737 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
FN1-221ENST00000480737 ZSWIM6Q9HCJ5 1215 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms