RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
PBRM1-220ENST00000480064 LHX8Q68G74 356 aa13.7□□□□□ -0.22
PBRM1-220ENST00000480064 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
PBRM1-220ENST00000480064 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
PBRM1-220ENST00000480064 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
PBRM1-220ENST00000480064 MS4A3Q96HJ5 214 aa13.66□□□□□ -0.22
PBRM1-220ENST00000480064 NUBP1P53384 320 aa13.61□□□□□ -0.23
PBRM1-220ENST00000480064 KIF12Q96FN5 646 aa13.61□□□□□ -0.23
PBRM1-220ENST00000480064 MAP3K13O43283 966 aa13.54□□□□□ -0.24
PBRM1-220ENST00000480064 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
PBRM1-220ENST00000480064 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
PBRM1-220ENST00000480064 ATMINO43313 823 aaPredicted RBP13.52□□□□□ -0.25
PBRM1-220ENST00000480064 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
PBRM1-220ENST00000480064 FAM212AQ96EL1 285 aa13.52□□□□□ -0.25
PBRM1-220ENST00000480064 KLHL34Q8N239 644 aa13.45□□□□□ -0.26
PBRM1-220ENST00000480064 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
PBRM1-220ENST00000480064 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
PBRM1-220ENST00000480064 ATN1P54259 1190 aaPredicted RBP13.43□□□□□ -0.26
PBRM1-220ENST00000480064 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
PBRM1-220ENST00000480064 SLC39A7Q92504 469 aa13.43□□□□□ -0.26
PBRM1-220ENST00000480064 PCDHB13Q9Y5F0 798 aa13.43□□□□□ -0.26
PBRM1-220ENST00000480064 BMP2KQ9NSY1 1161 aaPredicted RBP13.42□□□□□ -0.26
PBRM1-220ENST00000480064 C7P10643 843 aa13.41□□□□□ -0.26
PBRM1-220ENST00000480064 TIE1P35590 1138 aa13.41□□□□□ -0.26
PBRM1-220ENST00000480064 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
PBRM1-220ENST00000480064 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
PBRM1-220ENST00000480064 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
PBRM1-220ENST00000480064 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
PBRM1-220ENST00000480064 PYGBP11216 843 aa13.33□□□□□ -0.28
PBRM1-220ENST00000480064 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
PBRM1-220ENST00000480064 GSE1Q14687 1217 aa13.3□□□□□ -0.28
PBRM1-220ENST00000480064 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
PBRM1-220ENST00000480064 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
PBRM1-220ENST00000480064 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
PBRM1-220ENST00000480064 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
PBRM1-220ENST00000480064 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
PBRM1-220ENST00000480064 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
PBRM1-220ENST00000480064 PCDHB8Q9UN66 801 aa13.21□□□□□ -0.29
PBRM1-220ENST00000480064 SEC24BO95487 1268 aa13.2□□□□□ -0.3
PBRM1-220ENST00000480064 IER5LQ5T953 404 aa13.19□□□□□ -0.3
PBRM1-220ENST00000480064 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
PBRM1-220ENST00000480064 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
PBRM1-220ENST00000480064 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
PBRM1-220ENST00000480064 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
PBRM1-220ENST00000480064 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
PBRM1-220ENST00000480064 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
PBRM1-220ENST00000480064 SCUBE2Q9NQ36 999 aa13.12□□□□□ -0.31
PBRM1-220ENST00000480064 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
PBRM1-220ENST00000480064 PLCG2P16885 1265 aa13.06□□□□□ -0.32
PBRM1-220ENST00000480064 IRX5P78411 483 aaPredicted RBP13.05□□□□□ -0.32
PBRM1-220ENST00000480064 PSEN1P49768 467 aa13.02□□□□□ -0.33
PBRM1-220ENST00000480064 BCANQ96GW7 911 aa13.02□□□□□ -0.33
PBRM1-220ENST00000480064 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
PBRM1-220ENST00000480064 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
PBRM1-220ENST00000480064 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
PBRM1-220ENST00000480064 PDAP1Q13442 181 aaKnown RBP12.99□□□□□ -0.33
PBRM1-220ENST00000480064 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
PBRM1-220ENST00000480064 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
PBRM1-220ENST00000480064 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
PBRM1-220ENST00000480064 SLAIN1Q8ND83 568 aa12.89□□□□□ -0.35
PBRM1-220ENST00000480064 POTEMA6NI47 508 aa12.88□□□□□ -0.35
PBRM1-220ENST00000480064 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
PBRM1-220ENST00000480064 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
PBRM1-220ENST00000480064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.355e-7■■■□□ 16.6
PBRM1-220ENST00000480064 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
PBRM1-220ENST00000480064 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
PBRM1-220ENST00000480064 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
PBRM1-220ENST00000480064 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
PBRM1-220ENST00000480064 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
PBRM1-220ENST00000480064 PRKCSHP14314 528 aaPredicted RBP12.8□□□□□ -0.36
PBRM1-220ENST00000480064 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
PBRM1-220ENST00000480064 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
PBRM1-220ENST00000480064 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
PBRM1-220ENST00000480064 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.37
PBRM1-220ENST00000480064 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
PBRM1-220ENST00000480064 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
PBRM1-220ENST00000480064 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
PBRM1-220ENST00000480064 VGFO15240 615 aaPredicted RBP12.72□□□□□ -0.37
PBRM1-220ENST00000480064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
PBRM1-220ENST00000480064 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
PBRM1-220ENST00000480064 G3V3G9 751 aa12.68□□□□□ -0.38
PBRM1-220ENST00000480064 ST18O60284 1047 aa12.68□□□□□ -0.38
PBRM1-220ENST00000480064 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
PBRM1-220ENST00000480064 SNPHO15079 494 aa12.67□□□□□ -0.38
PBRM1-220ENST00000480064 PLSCR2Q9NRY7 297 aa12.67□□□□□ -0.38
PBRM1-220ENST00000480064 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
PBRM1-220ENST00000480064 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-220ENST00000480064 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
PBRM1-220ENST00000480064 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
PBRM1-220ENST00000480064 SOX12O15370 315 aa12.63□□□□□ -0.39
PBRM1-220ENST00000480064 PKD2Q13563 968 aa12.6□□□□□ -0.39
PBRM1-220ENST00000480064 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
PBRM1-220ENST00000480064 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-220ENST00000480064 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
PBRM1-220ENST00000480064 STK24Q9Y6E0 443 aa12.55□□□□□ -0.4
PBRM1-220ENST00000480064 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
PBRM1-220ENST00000480064 RGL2O15211 777 aa12.53□□□□□ -0.4
PBRM1-220ENST00000480064 BBXQ8WY36 941 aaPredicted RBP12.53□□□□□ -0.4
PBRM1-220ENST00000480064 STK25O00506 426 aa12.52□□□□□ -0.41
PBRM1-220ENST00000480064 CDAN1Q8IWY9 1227 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms