RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
RFC4-212ENST00000479307 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
RFC4-212ENST00000479307 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
RFC4-212ENST00000479307 BBXQ8WY36 941 aaPredicted RBP12.17□□□□□ -0.46
RFC4-212ENST00000479307 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
RFC4-212ENST00000479307 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
RFC4-212ENST00000479307 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
RFC4-212ENST00000479307 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
RFC4-212ENST00000479307 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
RFC4-212ENST00000479307 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
RFC4-212ENST00000479307 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
RFC4-212ENST00000479307 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
RFC4-212ENST00000479307 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
RFC4-212ENST00000479307 GABBR2O75899 941 aa12.08□□□□□ -0.48
RFC4-212ENST00000479307 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
RFC4-212ENST00000479307 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
RFC4-212ENST00000479307 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
RFC4-212ENST00000479307 VGFO15240 615 aaPredicted RBP12.01□□□□□ -0.49
RFC4-212ENST00000479307 DNAJC5Q9H3Z4 198 aa12□□□□□ -0.49
RFC4-212ENST00000479307 PYGBP11216 843 aa11.99□□□□□ -0.49
RFC4-212ENST00000479307 PAXIP1Q6ZW49 1069 aaPredicted RBP11.98□□□□□ -0.49
RFC4-212ENST00000479307 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
RFC4-212ENST00000479307 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
RFC4-212ENST00000479307 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
RFC4-212ENST00000479307 LHX8Q68G74 356 aa11.97□□□□□ -0.49
RFC4-212ENST00000479307 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
RFC4-212ENST00000479307 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
RFC4-212ENST00000479307 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
RFC4-212ENST00000479307 STK25O00506 426 aa11.92□□□□□ -0.5
RFC4-212ENST00000479307 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
RFC4-212ENST00000479307 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
RFC4-212ENST00000479307 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
RFC4-212ENST00000479307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
RFC4-212ENST00000479307 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
RFC4-212ENST00000479307 BCL11BQ9C0K0 894 aaPredicted RBP11.85□□□□□ -0.51
RFC4-212ENST00000479307 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
RFC4-212ENST00000479307 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
RFC4-212ENST00000479307 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
RFC4-212ENST00000479307 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
RFC4-212ENST00000479307 POTEIP0CG38 1075 aa11.81□□□□□ -0.52
RFC4-212ENST00000479307 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
RFC4-212ENST00000479307 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
RFC4-212ENST00000479307 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
RFC4-212ENST00000479307 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
RFC4-212ENST00000479307 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
RFC4-212ENST00000479307 ZRANB1Q9UGI0 708 aa11.76□□□□□ -0.53
RFC4-212ENST00000479307 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
RFC4-212ENST00000479307 MAP3K13O43283 966 aa11.73□□□□□ -0.53
RFC4-212ENST00000479307 PSEN1P49768 467 aa11.73□□□□□ -0.53
RFC4-212ENST00000479307 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
RFC4-212ENST00000479307 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
RFC4-212ENST00000479307 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
RFC4-212ENST00000479307 CLCN6P51797 869 aa11.66□□□□□ -0.54
RFC4-212ENST00000479307 BCANQ96GW7 911 aa11.65□□□□□ -0.54
RFC4-212ENST00000479307 PHF12Q96QT6 1004 aa11.65□□□□□ -0.54
RFC4-212ENST00000479307 SOX12O15370 315 aa11.58□□□□□ -0.56
RFC4-212ENST00000479307 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
RFC4-212ENST00000479307 CABP2Q9NPB3 220 aa11.58□□□□□ -0.56
RFC4-212ENST00000479307 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
RFC4-212ENST00000479307 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
RFC4-212ENST00000479307 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
RFC4-212ENST00000479307 NLRP6P59044 892 aa11.54□□□□□ -0.56
RFC4-212ENST00000479307 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
RFC4-212ENST00000479307 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
RFC4-212ENST00000479307 TIE1P35590 1138 aa11.5□□□□□ -0.57
RFC4-212ENST00000479307 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
RFC4-212ENST00000479307 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
RFC4-212ENST00000479307 PHF8Q9UPP1 1060 aa11.47□□□□□ -0.57
RFC4-212ENST00000479307 TRPC6Q9Y210 931 aa11.46□□□□□ -0.57
RFC4-212ENST00000479307 MKRN3Q13064 507 aaKnown RBP11.44□□□□□ -0.58
RFC4-212ENST00000479307 OTUD5Q96G74 571 aa11.44□□□□□ -0.58
RFC4-212ENST00000479307 POTEB2H3BUK9 544 aa11.43□□□□□ -0.58
RFC4-212ENST00000479307 TTLL13PA6NNM8 815 aa11.42□□□□□ -0.58
RFC4-212ENST00000479307 PPP1R37O75864 691 aa11.4□□□□□ -0.58
RFC4-212ENST00000479307 NBR1Q14596 966 aa11.4□□□□□ -0.58
RFC4-212ENST00000479307 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
RFC4-212ENST00000479307 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
RFC4-212ENST00000479307 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
RFC4-212ENST00000479307 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
RFC4-212ENST00000479307 WDR70Q9NW82 654 aa11.38□□□□□ -0.59
RFC4-212ENST00000479307 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
RFC4-212ENST00000479307 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
RFC4-212ENST00000479307 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
RFC4-212ENST00000479307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.64e-6■■■□□ 17.2
RFC4-212ENST00000479307 POTEMA6NI47 508 aa11.29□□□□□ -0.6
RFC4-212ENST00000479307 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
RFC4-212ENST00000479307 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
RFC4-212ENST00000479307 ATMINO43313 823 aaPredicted RBP11.26□□□□□ -0.61
RFC4-212ENST00000479307 PDE4AP27815 886 aa11.26□□□□□ -0.61
RFC4-212ENST00000479307 ATN1P54259 1190 aaPredicted RBP11.26□□□□□ -0.61
RFC4-212ENST00000479307 IER5LQ5T953 404 aa11.26□□□□□ -0.61
RFC4-212ENST00000479307 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
RFC4-212ENST00000479307 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
RFC4-212ENST00000479307 NCKAP5LQ9HCH0 1330 aa11.24□□□□□ -0.61
RFC4-212ENST00000479307 SLC39A7Q92504 469 aa11.23□□□□□ -0.61
RFC4-212ENST00000479307 CRISPLD2Q9H0B8 497 aa11.23□□□□□ -0.61
RFC4-212ENST00000479307 MFSD10Q14728 455 aa11.22□□□□□ -0.61
RFC4-212ENST00000479307 E2F4Q16254 413 aa11.22□□□□□ -0.61
RFC4-212ENST00000479307 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
RFC4-212ENST00000479307 C7P10643 843 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms