RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
RPL39-203ENST00000477403 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
RPL39-203ENST00000477403 CLCN6P51797 869 aa10.31□□□□□ -0.76
RPL39-203ENST00000477403 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
RPL39-203ENST00000477403 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
RPL39-203ENST00000477403 GALR2O43603 387 aaPredicted RBP10.27□□□□□ -0.77
RPL39-203ENST00000477403 KIF12Q96FN5 646 aa10.24□□□□□ -0.77
RPL39-203ENST00000477403 MS4A3Q96HJ5 214 aa10.24□□□□□ -0.77
RPL39-203ENST00000477403 GSE1Q14687 1217 aa10.23□□□□□ -0.77
RPL39-203ENST00000477403 MAP3K13O43283 966 aa10.22□□□□□ -0.77
RPL39-203ENST00000477403 DCBLD2Q96PD2 775 aa10.21□□□□□ -0.77
RPL39-203ENST00000477403 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
RPL39-203ENST00000477403 PYGBP11216 843 aa10.2□□□□□ -0.78
RPL39-203ENST00000477403 PCDHB13Q9Y5F0 798 aa10.17□□□□□ -0.78
RPL39-203ENST00000477403 POTEIP0CG38 1075 aa10.16□□□□□ -0.78
RPL39-203ENST00000477403 SGIP1Q9BQI5 828 aa10.13□□□□□ -0.79
RPL39-203ENST00000477403 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
RPL39-203ENST00000477403 IFNL1Q8IU54 200 aa10.11□□□□□ -0.79
RPL39-203ENST00000477403 CHRM1P11229 460 aaPredicted RBP10.07□□□□□ -0.8
RPL39-203ENST00000477403 PCDHB8Q9UN66 801 aa10.07□□□□□ -0.8
RPL39-203ENST00000477403 ATMINO43313 823 aaPredicted RBP10.06□□□□□ -0.8
RPL39-203ENST00000477403 ASTLQ6HA08 431 aaPredicted RBP10.06□□□□□ -0.8
RPL39-203ENST00000477403 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
RPL39-203ENST00000477403 TIE1P35590 1138 aa10.05□□□□□ -0.8
RPL39-203ENST00000477403 ZNF467Q7Z7K2 595 aaPredicted RBP10.04□□□□□ -0.8
RPL39-203ENST00000477403 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
RPL39-203ENST00000477403 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
RPL39-203ENST00000477403 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
RPL39-203ENST00000477403 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
RPL39-203ENST00000477403 TMEM106CQ9BVX2 250 aa10.01□□□□□ -0.81
RPL39-203ENST00000477403 TRIM35Q9UPQ4 493 aa9.97□□□□□ -0.81
RPL39-203ENST00000477403 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
RPL39-203ENST00000477403 ECM2O94769 699 aaPredicted RBP9.95□□□□□ -0.82
RPL39-203ENST00000477403 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
RPL39-203ENST00000477403 PSEN1P49768 467 aa9.94□□□□□ -0.82
RPL39-203ENST00000477403 PKD2Q13563 968 aa9.94□□□□□ -0.82
RPL39-203ENST00000477403 C7P10643 843 aa9.93□□□□□ -0.82
RPL39-203ENST00000477403 PDAP1Q13442 181 aaKnown RBP9.93□□□□□ -0.82
RPL39-203ENST00000477403 LHX8Q68G74 356 aa9.92□□□□□ -0.82
RPL39-203ENST00000477403 RNF25Q96BH1 459 aaPredicted RBP9.91□□□□□ -0.82
RPL39-203ENST00000477403 RIOK3O14730 519 aaKnown RBP9.9□□□□□ -0.82
RPL39-203ENST00000477403 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
RPL39-203ENST00000477403 SEC24BO95487 1268 aa9.87□□□□□ -0.83
RPL39-203ENST00000477403 IER5LQ5T953 404 aa9.86□□□□□ -0.83
RPL39-203ENST00000477403 RGL2O15211 777 aa9.85□□□□□ -0.83
RPL39-203ENST00000477403 VGFO15240 615 aaPredicted RBP9.85□□□□□ -0.83
RPL39-203ENST00000477403 POTEFA5A3E0 1075 aa9.84□□□□□ -0.83
RPL39-203ENST00000477403 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
RPL39-203ENST00000477403 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
RPL39-203ENST00000477403 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
RPL39-203ENST00000477403 COLQQ9Y215 455 aaPredicted RBP9.84□□□□□ -0.83
RPL39-203ENST00000477403 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.83□□□□□ -0.84
RPL39-203ENST00000477403 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
RPL39-203ENST00000477403 PLCG2P16885 1265 aa9.81□□□□□ -0.84
RPL39-203ENST00000477403 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
RPL39-203ENST00000477403 IRX5P78411 483 aaPredicted RBP9.79□□□□□ -0.84
RPL39-203ENST00000477403 OCEL1Q9H607 264 aa9.77□□□□□ -0.85
RPL39-203ENST00000477403 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
RPL39-203ENST00000477403 BCL11BQ9C0K0 894 aaPredicted RBP9.76□□□□□ -0.85
RPL39-203ENST00000477403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.76□□□□□ -0.85
RPL39-203ENST00000477403 STK25O00506 426 aa9.75□□□□□ -0.85
RPL39-203ENST00000477403 POTEJP0CG39 1038 aa9.75□□□□□ -0.85
RPL39-203ENST00000477403 STK24Q9Y6E0 443 aa9.75□□□□□ -0.85
RPL39-203ENST00000477403 OTUD5Q96G74 571 aa9.72□□□□□ -0.85
RPL39-203ENST00000477403 PDCD7Q8N8D1 485 aaKnown RBP9.71□□□□□ -0.86
RPL39-203ENST00000477403 MAMSTRQ6ZN01 415 aa9.7□□□□□ -0.86
RPL39-203ENST00000477403 SCUBE2Q9NQ36 999 aa9.7□□□□□ -0.86
RPL39-203ENST00000477403 DCAF8L2P0C7V8 631 aa9.67□□□□□ -0.86
RPL39-203ENST00000477403 SOX12O15370 315 aa9.66□□□□□ -0.86
RPL39-203ENST00000477403 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
RPL39-203ENST00000477403 ILDR1Q86SU0 546 aaPredicted RBP9.66□□□□□ -0.86
RPL39-203ENST00000477403 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
RPL39-203ENST00000477403 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
RPL39-203ENST00000477403 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.86
RPL39-203ENST00000477403 L3MBTL3Q96JM7 780 aaPredicted RBP9.64□□□□□ -0.87
RPL39-203ENST00000477403 RTN4Q9NQC3 1192 aaKnown RBP9.63□□□□□ -0.87
RPL39-203ENST00000477403 G3V3G9 751 aa9.62□□□□□ -0.87
RPL39-203ENST00000477403 HS6ST3Q8IZP7 471 aa9.61□□□□□ -0.87
RPL39-203ENST00000477403 NLRP6P59044 892 aa9.6□□□□□ -0.87
RPL39-203ENST00000477403 C3orf67Q6ZVT6 689 aa9.59□□□□□ -0.87
RPL39-203ENST00000477403 MS4A4AQ96JQ5 239 aa9.59□□□□□ -0.87
RPL39-203ENST00000477403 MFRPQ9BY79 579 aa9.59□□□□□ -0.87
RPL39-203ENST00000477403 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.59□□□□□ -0.87
RPL39-203ENST00000477403 BOLA1Q9Y3E2 137 aa9.59□□□□□ -0.87
RPL39-203ENST00000477403 SLAIN1Q8ND83 568 aa9.58□□□□□ -0.88
RPL39-203ENST00000477403 FBXO22Q8NEZ5 403 aa9.57□□□□□ -0.88
RPL39-203ENST00000477403 MICALL2Q8IY33 904 aa9.52□□□□□ -0.89
RPL39-203ENST00000477403 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
RPL39-203ENST00000477403 NKX1-1Q15270 411 aaPredicted RBP9.49□□□□□ -0.89
RPL39-203ENST00000477403 DNAJC5Q9H3Z4 198 aa9.47□□□□□ -0.89
RPL39-203ENST00000477403 PPP1R37O75864 691 aa9.46□□□□□ -0.9
RPL39-203ENST00000477403 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
RPL39-203ENST00000477403 RYDENQ9NUL5 291 aaKnown RBP9.42□□□□□ -0.9
RPL39-203ENST00000477403 TMEM92Q6UXU6 159 aa9.41□□□□□ -0.9
RPL39-203ENST00000477403 SNPHO15079 494 aa9.4□□□□□ -0.9
RPL39-203ENST00000477403 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
RPL39-203ENST00000477403 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
RPL39-203ENST00000477403 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
RPL39-203ENST00000477403 ST18O60284 1047 aa9.35□□□□□ -0.91
RPL39-203ENST00000477403 C2orf72A6NCS6 295 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms