RNA–Protein interactions for RNA: ENST00000476977.5

GTF2IRD1-205, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 5,868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-205ENST00000476977 PPM1GO15355 546 aaPredicted RBP19.82■□□□□ 0.76
GTF2IRD1-205ENST00000476977 CCDC9Q9Y3X0 531 aaKnown RBP19.76■□□□□ 0.75
GTF2IRD1-205ENST00000476977 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
GTF2IRD1-205ENST00000476977 HSP90AA1P07900 732 aaKnown RBP19.71■□□□□ 0.75
GTF2IRD1-205ENST00000476977 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
GTF2IRD1-205ENST00000476977 NACADO15069 1562 aa19.68■□□□□ 0.74
GTF2IRD1-205ENST00000476977 GGT6Q6P531 493 aa19.67■□□□□ 0.74
GTF2IRD1-205ENST00000476977 MYH16Q9H6N6 1097 aa19.67■□□□□ 0.74
GTF2IRD1-205ENST00000476977 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
GTF2IRD1-205ENST00000476977 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
GTF2IRD1-205ENST00000476977 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
GTF2IRD1-205ENST00000476977 SOX12O15370 315 aa19.63■□□□□ 0.73
GTF2IRD1-205ENST00000476977 KANK1Q14678 1352 aa19.62■□□□□ 0.73
GTF2IRD1-205ENST00000476977 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
GTF2IRD1-205ENST00000476977 CDK11BP21127 795 aaKnown RBP19.59■□□□□ 0.73
GTF2IRD1-205ENST00000476977 CYB5RLQ6IPT4 315 aa19.58■□□□□ 0.73
GTF2IRD1-205ENST00000476977 TULP1O00294 542 aaPredicted RBP19.57■□□□□ 0.72
GTF2IRD1-205ENST00000476977 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
GTF2IRD1-205ENST00000476977 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
GTF2IRD1-205ENST00000476977 PDS5BQ9NTI5 1447 aa19.55■□□□□ 0.72
GTF2IRD1-205ENST00000476977 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
GTF2IRD1-205ENST00000476977 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
GTF2IRD1-205ENST00000476977 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
GTF2IRD1-205ENST00000476977 CDCA8Q53HL2 280 aa19.54■□□□□ 0.72
GTF2IRD1-205ENST00000476977 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
GTF2IRD1-205ENST00000476977 GOLGA2Q08379 1002 aa19.52■□□□□ 0.71
GTF2IRD1-205ENST00000476977 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
GTF2IRD1-205ENST00000476977 CLIP1P30622 1438 aa19.51■□□□□ 0.71
GTF2IRD1-205ENST00000476977 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
GTF2IRD1-205ENST00000476977 CCNB3Q8WWL7 1395 aa19.5■□□□□ 0.71
GTF2IRD1-205ENST00000476977 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
GTF2IRD1-205ENST00000476977 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
GTF2IRD1-205ENST00000476977 TMX4Q9H1E5 349 aaPredicted RBP19.48■□□□□ 0.71
GTF2IRD1-205ENST00000476977 KNSTRNQ9Y448 316 aa19.47■□□□□ 0.71
GTF2IRD1-205ENST00000476977 EID1Q9Y6B2 187 aa19.47■□□□□ 0.71
GTF2IRD1-205ENST00000476977 MEX3CQ5U5Q3 659 aaKnown RBP19.47■□□□□ 0.71
GTF2IRD1-205ENST00000476977 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
GTF2IRD1-205ENST00000476977 CARMIL2Q6F5E8 1435 aa19.47■□□□□ 0.71
GTF2IRD1-205ENST00000476977 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.71
GTF2IRD1-205ENST00000476977 SRPK2P78362 688 aaKnown RBP19.45■□□□□ 0.7
GTF2IRD1-205ENST00000476977 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.72e-6■■■■■ 44.7
GTF2IRD1-205ENST00000476977 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
GTF2IRD1-205ENST00000476977 STK26Q9P289 416 aa19.45■□□□□ 0.7
GTF2IRD1-205ENST00000476977 MAPK8IP3Q9UPT6 1336 aa19.44■□□□□ 0.7
GTF2IRD1-205ENST00000476977 TNNT2P45379 298 aaPredicted RBP19.44■□□□□ 0.7
GTF2IRD1-205ENST00000476977 NUDCQ9Y266 331 aa19.42■□□□□ 0.7
GTF2IRD1-205ENST00000476977 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
GTF2IRD1-205ENST00000476977 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.7
GTF2IRD1-205ENST00000476977 ZNF330Q9Y3S2 320 aaPredicted RBP19.39■□□□□ 0.69
GTF2IRD1-205ENST00000476977 MRS2Q9HD23 443 aa19.39■□□□□ 0.69
GTF2IRD1-205ENST00000476977 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
GTF2IRD1-205ENST00000476977 DCAF8L1A6NGE4 600 aa19.35■□□□□ 0.69
GTF2IRD1-205ENST00000476977 EFCAB2Q5VUJ9 269 aa19.35■□□□□ 0.69
GTF2IRD1-205ENST00000476977 U2SURPO15042 1029 aaKnown RBP19.35■□□□□ 0.69
GTF2IRD1-205ENST00000476977 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
GTF2IRD1-205ENST00000476977 CUX2O14529 1486 aa19.34■□□□□ 0.69
GTF2IRD1-205ENST00000476977 ANP32AP39687 249 aaKnown RBP19.34■□□□□ 0.69
GTF2IRD1-205ENST00000476977 ISY1Q9ULR0 285 aaKnown RBP19.34■□□□□ 0.69
GTF2IRD1-205ENST00000476977 ANP32BQ92688 251 aaKnown RBP19.33■□□□□ 0.68
GTF2IRD1-205ENST00000476977 OS9Q13438 667 aaPredicted RBP19.32■□□□□ 0.68
GTF2IRD1-205ENST00000476977 TAOK2Q9UL54 1235 aa19.32■□□□□ 0.68
GTF2IRD1-205ENST00000476977 CARMIL1Q5VZK9 1371 aa19.29■□□□□ 0.68
GTF2IRD1-205ENST00000476977 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
GTF2IRD1-205ENST00000476977 MSH5O43196 834 aa19.29■□□□□ 0.68
GTF2IRD1-205ENST00000476977 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
GTF2IRD1-205ENST00000476977 G3V3G9 751 aa19.27■□□□□ 0.67
GTF2IRD1-205ENST00000476977 DCAF8Q5TAQ9 597 aa19.27■□□□□ 0.67
GTF2IRD1-205ENST00000476977 SOGA1O94964 1423 aa19.25■□□□□ 0.67
GTF2IRD1-205ENST00000476977 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
GTF2IRD1-205ENST00000476977 RTF1Q92541 710 aaKnown RBP19.23■□□□□ 0.67
GTF2IRD1-205ENST00000476977 KIF3BO15066 747 aa19.23■□□□□ 0.67
GTF2IRD1-205ENST00000476977 WASHC2CQ9Y4E1 1318 aa19.22■□□□□ 0.67
GTF2IRD1-205ENST00000476977 PNNQ9H307 717 aaKnown RBP19.22■□□□□ 0.67
GTF2IRD1-205ENST00000476977 FTSJ3Q8IY81 847 aaKnown RBP19.22■□□□□ 0.67
GTF2IRD1-205ENST00000476977 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
GTF2IRD1-205ENST00000476977 KLHL34Q8N239 644 aa19.21■□□□□ 0.67
GTF2IRD1-205ENST00000476977 EEA1Q15075 1411 aa19.2■□□□□ 0.66
GTF2IRD1-205ENST00000476977 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
GTF2IRD1-205ENST00000476977 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
GTF2IRD1-205ENST00000476977 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
GTF2IRD1-205ENST00000476977 FAM69CQ0P6D2 419 aa19.19■□□□□ 0.66
GTF2IRD1-205ENST00000476977 NUTM2DQ5VT03 806 aaPredicted RBP19.18■□□□□ 0.66
GTF2IRD1-205ENST00000476977 EVA1CP58658 441 aa19.18■□□□□ 0.66
GTF2IRD1-205ENST00000476977 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
GTF2IRD1-205ENST00000476977 CCDC136Q96JN2 1154 aa19.16■□□□□ 0.66
GTF2IRD1-205ENST00000476977 CLSTN1O94985 981 aa19.16■□□□□ 0.66
GTF2IRD1-205ENST00000476977 SENP3-EIF4A1A0A087X0R7 540 aa19.16■□□□□ 0.66
GTF2IRD1-205ENST00000476977 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
GTF2IRD1-205ENST00000476977 CASC1Q6TDU7 716 aa19.15■□□□□ 0.66
GTF2IRD1-205ENST00000476977 CC2D1BQ5T0F9 858 aaKnown RBP19.15■□□□□ 0.66
GTF2IRD1-205ENST00000476977 TMF1P82094 1093 aa19.13■□□□□ 0.65
GTF2IRD1-205ENST00000476977 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
GTF2IRD1-205ENST00000476977 SPAG9O60271 1321 aaKnown RBP19.12■□□□□ 0.65
GTF2IRD1-205ENST00000476977 GTF2E1P29083 439 aaPredicted RBP19.12■□□□□ 0.65
GTF2IRD1-205ENST00000476977 MORC1Q86VD1 984 aa19.11■□□□□ 0.65
GTF2IRD1-205ENST00000476977 NAP1L2Q9ULW6 460 aaPredicted RBP19.11■□□□□ 0.65
GTF2IRD1-205ENST00000476977 FGD1P98174 961 aa19.11■□□□□ 0.65
GTF2IRD1-205ENST00000476977 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
GTF2IRD1-205ENST00000476977 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
GTF2IRD1-205ENST00000476977 FKBP8Q14318 412 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms