RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 TMC1Q8TDI8 760 aa21.78■■□□□ 1.08
HNRNPU-209ENST00000476241 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
HNRNPU-209ENST00000476241 PDS5BQ9NTI5 1447 aa21.77■■□□□ 1.08
HNRNPU-209ENST00000476241 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.072e-12■■■■□ 22
HNRNPU-209ENST00000476241 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
HNRNPU-209ENST00000476241 NEFMP07197 916 aa21.71■■□□□ 1.07
HNRNPU-209ENST00000476241 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
HNRNPU-209ENST00000476241 SLC24A1O60721 1099 aa21.64■■□□□ 1.05
HNRNPU-209ENST00000476241 IRX6P78412 446 aaPredicted RBP21.63■■□□□ 1.05
HNRNPU-209ENST00000476241 SALL2Q9Y467 1007 aaPredicted RBP21.62■■□□□ 1.05
HNRNPU-209ENST00000476241 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
HNRNPU-209ENST00000476241 UPF2Q9HAU5 1272 aaKnown RBP21.59■■□□□ 1.05
HNRNPU-209ENST00000476241 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.05
HNRNPU-209ENST00000476241 ANP32EQ9BTT0 268 aa21.58■■□□□ 1.04
HNRNPU-209ENST00000476241 NBR1Q14596 966 aa21.56■■□□□ 1.04
HNRNPU-209ENST00000476241 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
HNRNPU-209ENST00000476241 SOGA1O94964 1423 aa21.54■■□□□ 1.04
HNRNPU-209ENST00000476241 SUPT16HQ9Y5B9 1047 aaKnown RBP21.54■■□□□ 1.04
HNRNPU-209ENST00000476241 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
HNRNPU-209ENST00000476241 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.04
HNRNPU-209ENST00000476241 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
HNRNPU-209ENST00000476241 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
HNRNPU-209ENST00000476241 C14orf37Q86TY3 774 aa21.51■■□□□ 1.03
HNRNPU-209ENST00000476241 WDR43Q15061 677 aaKnown RBP eCLIP21.5■■□□□ 1.032e-6■■□□□ 12.7
HNRNPU-209ENST00000476241 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
HNRNPU-209ENST00000476241 SIN3AQ96ST3 1273 aa21.48■■□□□ 1.03
HNRNPU-209ENST00000476241 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
HNRNPU-209ENST00000476241 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
HNRNPU-209ENST00000476241 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
HNRNPU-209ENST00000476241 CADPSQ9ULU8 1353 aa21.45■■□□□ 1.02
HNRNPU-209ENST00000476241 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
HNRNPU-209ENST00000476241 CUX2O14529 1486 aa21.43■■□□□ 1.02
HNRNPU-209ENST00000476241 EIF5BO60841 1220 aaKnown RBP21.43■■□□□ 1.02
HNRNPU-209ENST00000476241 HSP90AA1P07900 732 aaKnown RBP21.42■■□□□ 1.02
HNRNPU-209ENST00000476241 ANP32BQ92688 251 aaKnown RBP21.41■■□□□ 1.02
HNRNPU-209ENST00000476241 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
HNRNPU-209ENST00000476241 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
HNRNPU-209ENST00000476241 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.01
HNRNPU-209ENST00000476241 MLECQ14165 292 aa21.39■■□□□ 1.01
HNRNPU-209ENST00000476241 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
HNRNPU-209ENST00000476241 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
HNRNPU-209ENST00000476241 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
HNRNPU-209ENST00000476241 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
HNRNPU-209ENST00000476241 DDRGK1Q96HY6 314 aa21.34■■□□□ 1.01
HNRNPU-209ENST00000476241 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
HNRNPU-209ENST00000476241 CARMIL2Q6F5E8 1435 aa21.3■■□□□ 1
HNRNPU-209ENST00000476241 PLEKHG5O94827 1062 aa21.3■■□□□ 1
HNRNPU-209ENST00000476241 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
HNRNPU-209ENST00000476241 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
HNRNPU-209ENST00000476241 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
HNRNPU-209ENST00000476241 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
HNRNPU-209ENST00000476241 CARD11Q9BXL7 1154 aa21.25■□□□□ 0.99
HNRNPU-209ENST00000476241 A0A0G2JS52 829 aa21.24■□□□□ 0.99
HNRNPU-209ENST00000476241 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
HNRNPU-209ENST00000476241 HAP1P54257 671 aaPredicted RBP21.24■□□□□ 0.99
HNRNPU-209ENST00000476241 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
HNRNPU-209ENST00000476241 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
HNRNPU-209ENST00000476241 BECN1Q14457 450 aa21.2■□□□□ 0.98
HNRNPU-209ENST00000476241 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
HNRNPU-209ENST00000476241 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
HNRNPU-209ENST00000476241 GLIPR1L2Q4G1C9 344 aa21.16■□□□□ 0.98
HNRNPU-209ENST00000476241 ERICH6BQ5W0A0 696 aa21.16■□□□□ 0.98
HNRNPU-209ENST00000476241 RBM19Q9Y4C8 960 aaKnown RBP21.16■□□□□ 0.98
HNRNPU-209ENST00000476241 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
HNRNPU-209ENST00000476241 NOP58Q9Y2X3 529 aaKnown RBP21.16■□□□□ 0.98
HNRNPU-209ENST00000476241 B4GALNT3Q6L9W6 998 aa21.15■□□□□ 0.98
HNRNPU-209ENST00000476241 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.98
HNRNPU-209ENST00000476241 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
HNRNPU-209ENST00000476241 SENP3-EIF4A1A0A087X0R7 540 aa21.12■□□□□ 0.97
HNRNPU-209ENST00000476241 GGT6Q6P531 493 aa21.12■□□□□ 0.97
HNRNPU-209ENST00000476241 ARHGAP35Q9NRY4 1499 aa21.1■□□□□ 0.97
HNRNPU-209ENST00000476241 EFCAB2Q5VUJ9 269 aa21.1■□□□□ 0.97
HNRNPU-209ENST00000476241 HSPA5P11021 654 aaKnown RBP21.09■□□□□ 0.97
HNRNPU-209ENST00000476241 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.96
HNRNPU-209ENST00000476241 ARXQ96QS3 562 aa21.08■□□□□ 0.96
HNRNPU-209ENST00000476241 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
HNRNPU-209ENST00000476241 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
HNRNPU-209ENST00000476241 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
HNRNPU-209ENST00000476241 HDGFP51858 240 aaKnown RBP21.06■□□□□ 0.96
HNRNPU-209ENST00000476241 LMOD2Q6P5Q4 547 aa21.06■□□□□ 0.96
HNRNPU-209ENST00000476241 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
HNRNPU-209ENST00000476241 TSHZ2Q9NRE2 1034 aa21.04■□□□□ 0.96
HNRNPU-209ENST00000476241 WIZO95785 1651 aa21.03■□□□□ 0.96
HNRNPU-209ENST00000476241 LAS1LQ9Y4W2 734 aaKnown RBP20.98■□□□□ 0.95
HNRNPU-209ENST00000476241 DHX57Q6P158 1386 aaKnown RBP20.97■□□□□ 0.95
HNRNPU-209ENST00000476241 KANK1Q14678 1352 aa20.96■□□□□ 0.95
HNRNPU-209ENST00000476241 POGKQ9P215 609 aa20.96■□□□□ 0.95
HNRNPU-209ENST00000476241 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
HNRNPU-209ENST00000476241 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
HNRNPU-209ENST00000476241 GOLGA6L22H0YM25 854 aa20.94■□□□□ 0.94
HNRNPU-209ENST00000476241 RGS3P49796 1198 aa20.94■□□□□ 0.94
HNRNPU-209ENST00000476241 TMF1P82094 1093 aa20.93■□□□□ 0.94
HNRNPU-209ENST00000476241 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
HNRNPU-209ENST00000476241 TRIM44Q96DX7 344 aaPredicted RBP20.93■□□□□ 0.94
HNRNPU-209ENST00000476241 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
HNRNPU-209ENST00000476241 CC2D1BQ5T0F9 858 aaKnown RBP20.92■□□□□ 0.94
HNRNPU-209ENST00000476241 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
HNRNPU-209ENST00000476241 FTSJ3Q8IY81 847 aaKnown RBP20.9■□□□□ 0.94
HNRNPU-209ENST00000476241 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
HNRNPU-209ENST00000476241 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms