RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
TOP2B-206ENST00000475717 CLCN6P51797 869 aa12.88□□□□□ -0.35
TOP2B-206ENST00000475717 NUBP1P53384 320 aa12.87□□□□□ -0.35
TOP2B-206ENST00000475717 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
TOP2B-206ENST00000475717 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
TOP2B-206ENST00000475717 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
TOP2B-206ENST00000475717 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
TOP2B-206ENST00000475717 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
TOP2B-206ENST00000475717 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
TOP2B-206ENST00000475717 DCAF8Q5TAQ9 597 aa12.77□□□□□ -0.37
TOP2B-206ENST00000475717 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
TOP2B-206ENST00000475717 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
TOP2B-206ENST00000475717 MAP3K13O43283 966 aa12.72□□□□□ -0.37
TOP2B-206ENST00000475717 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
TOP2B-206ENST00000475717 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
TOP2B-206ENST00000475717 PYGBP11216 843 aa12.65□□□□□ -0.38
TOP2B-206ENST00000475717 GSE1Q14687 1217 aa12.64□□□□□ -0.39
TOP2B-206ENST00000475717 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
TOP2B-206ENST00000475717 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
TOP2B-206ENST00000475717 PKD2Q13563 968 aa12.59□□□□□ -0.39
TOP2B-206ENST00000475717 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
TOP2B-206ENST00000475717 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
TOP2B-206ENST00000475717 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
TOP2B-206ENST00000475717 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
TOP2B-206ENST00000475717 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
TOP2B-206ENST00000475717 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
TOP2B-206ENST00000475717 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
TOP2B-206ENST00000475717 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
TOP2B-206ENST00000475717 TIE1P35590 1138 aa12.53□□□□□ -0.4
TOP2B-206ENST00000475717 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
TOP2B-206ENST00000475717 LHX8Q68G74 356 aa12.52□□□□□ -0.41
TOP2B-206ENST00000475717 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
TOP2B-206ENST00000475717 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
TOP2B-206ENST00000475717 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
TOP2B-206ENST00000475717 SLC39A7Q92504 469 aa12.46□□□□□ -0.41
TOP2B-206ENST00000475717 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
TOP2B-206ENST00000475717 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
TOP2B-206ENST00000475717 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
TOP2B-206ENST00000475717 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
TOP2B-206ENST00000475717 C7P10643 843 aa12.42□□□□□ -0.42
TOP2B-206ENST00000475717 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
TOP2B-206ENST00000475717 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
TOP2B-206ENST00000475717 POTEB2H3BUK9 544 aa12.35□□□□□ -0.43
TOP2B-206ENST00000475717 SEC24BO95487 1268 aa12.34□□□□□ -0.43
TOP2B-206ENST00000475717 PSEN1P49768 467 aa12.34□□□□□ -0.43
TOP2B-206ENST00000475717 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
TOP2B-206ENST00000475717 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
TOP2B-206ENST00000475717 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
TOP2B-206ENST00000475717 IER5LQ5T953 404 aa12.3□□□□□ -0.44
TOP2B-206ENST00000475717 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
TOP2B-206ENST00000475717 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
TOP2B-206ENST00000475717 RGL2O15211 777 aa12.27□□□□□ -0.45
TOP2B-206ENST00000475717 BBXQ8WY36 941 aaPredicted RBP12.26□□□□□ -0.45
TOP2B-206ENST00000475717 PLCG2P16885 1265 aa12.25□□□□□ -0.45
TOP2B-206ENST00000475717 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.25□□□□□ -0.45
TOP2B-206ENST00000475717 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
TOP2B-206ENST00000475717 RIOK3O14730 519 aaKnown RBP12.23□□□□□ -0.45
TOP2B-206ENST00000475717 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
TOP2B-206ENST00000475717 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
TOP2B-206ENST00000475717 MKRN3Q13064 507 aaKnown RBP12.22□□□□□ -0.45
TOP2B-206ENST00000475717 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
TOP2B-206ENST00000475717 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
TOP2B-206ENST00000475717 MAMSTRQ6ZN01 415 aa12.18□□□□□ -0.46
TOP2B-206ENST00000475717 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
TOP2B-206ENST00000475717 VGFO15240 615 aaPredicted RBP12.16□□□□□ -0.46
TOP2B-206ENST00000475717 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
TOP2B-206ENST00000475717 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
TOP2B-206ENST00000475717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
TOP2B-206ENST00000475717 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
TOP2B-206ENST00000475717 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
TOP2B-206ENST00000475717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.473e-9■■■■■ 49.4
TOP2B-206ENST00000475717 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
TOP2B-206ENST00000475717 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
TOP2B-206ENST00000475717 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
TOP2B-206ENST00000475717 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
TOP2B-206ENST00000475717 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
TOP2B-206ENST00000475717 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
TOP2B-206ENST00000475717 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
TOP2B-206ENST00000475717 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
TOP2B-206ENST00000475717 STK25O00506 426 aa12.03□□□□□ -0.48
TOP2B-206ENST00000475717 BCANQ96GW7 911 aa12.03□□□□□ -0.48
TOP2B-206ENST00000475717 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
TOP2B-206ENST00000475717 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
TOP2B-206ENST00000475717 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
TOP2B-206ENST00000475717 L3MBTL3Q96JM7 780 aaPredicted RBP12□□□□□ -0.49
TOP2B-206ENST00000475717 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
TOP2B-206ENST00000475717 G3V3G9 751 aa11.98□□□□□ -0.49
TOP2B-206ENST00000475717 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
TOP2B-206ENST00000475717 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
TOP2B-206ENST00000475717 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
TOP2B-206ENST00000475717 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
TOP2B-206ENST00000475717 SOX12O15370 315 aa11.95□□□□□ -0.5
TOP2B-206ENST00000475717 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
TOP2B-206ENST00000475717 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
TOP2B-206ENST00000475717 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
TOP2B-206ENST00000475717 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
TOP2B-206ENST00000475717 NLRP6P59044 892 aa11.89□□□□□ -0.51
TOP2B-206ENST00000475717 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
TOP2B-206ENST00000475717 MFRPQ9BY79 579 aa11.86□□□□□ -0.51
TOP2B-206ENST00000475717 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms