RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-205ENST00000473883 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
HCLS1-205ENST00000473883 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
HCLS1-205ENST00000473883 BCCIPQ9P287 314 aaKnown RBP eCLIP17.58■□□□□ 0.4
HCLS1-205ENST00000473883 IPO4Q8TEX9 1081 aaKnown RBP17.56■□□□□ 0.4
HCLS1-205ENST00000473883 RRP9O43818 475 aaKnown RBP17.54■□□□□ 0.4
HCLS1-205ENST00000473883 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
HCLS1-205ENST00000473883 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
HCLS1-205ENST00000473883 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
HCLS1-205ENST00000473883 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
HCLS1-205ENST00000473883 BBXQ8WY36 941 aaPredicted RBP17.45■□□□□ 0.38
HCLS1-205ENST00000473883 CDK11BP21127 795 aaKnown RBP17.43■□□□□ 0.38
HCLS1-205ENST00000473883 HSP90AA2PQ14568 343 aaPredicted RBP17.43■□□□□ 0.38
HCLS1-205ENST00000473883 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
HCLS1-205ENST00000473883 NBR1Q14596 966 aa17.42■□□□□ 0.38
HCLS1-205ENST00000473883 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
HCLS1-205ENST00000473883 CHRM1P11229 460 aaPredicted RBP17.41■□□□□ 0.38
HCLS1-205ENST00000473883 NOP58Q9Y2X3 529 aaKnown RBP17.41■□□□□ 0.38
HCLS1-205ENST00000473883 GTF2E1P29083 439 aaPredicted RBP17.4■□□□□ 0.38
HCLS1-205ENST00000473883 PRDM4Q9UKN5 801 aa17.4■□□□□ 0.38
HCLS1-205ENST00000473883 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
HCLS1-205ENST00000473883 ZFP91Q96JP5 570 aaPredicted RBP17.38■□□□□ 0.37
HCLS1-205ENST00000473883 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
HCLS1-205ENST00000473883 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
HCLS1-205ENST00000473883 BCANQ96GW7 911 aa17.32■□□□□ 0.36
HCLS1-205ENST00000473883 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
HCLS1-205ENST00000473883 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
HCLS1-205ENST00000473883 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
HCLS1-205ENST00000473883 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
HCLS1-205ENST00000473883 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
HCLS1-205ENST00000473883 FKBP8Q14318 412 aa17.29■□□□□ 0.36
HCLS1-205ENST00000473883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.28■□□□□ 0.36
HCLS1-205ENST00000473883 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
HCLS1-205ENST00000473883 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
HCLS1-205ENST00000473883 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
HCLS1-205ENST00000473883 SECISBP2LQ93073 1101 aaKnown RBP17.25■□□□□ 0.35
HCLS1-205ENST00000473883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
HCLS1-205ENST00000473883 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
HCLS1-205ENST00000473883 BRPF3Q9ULD4 1205 aa17.23■□□□□ 0.35
HCLS1-205ENST00000473883 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
HCLS1-205ENST00000473883 HSP90AA1P07900 732 aaKnown RBP17.2■□□□□ 0.34
HCLS1-205ENST00000473883 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
HCLS1-205ENST00000473883 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
HCLS1-205ENST00000473883 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
HCLS1-205ENST00000473883 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
HCLS1-205ENST00000473883 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
HCLS1-205ENST00000473883 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
HCLS1-205ENST00000473883 RGS3P49796 1198 aa17.14■□□□□ 0.33
HCLS1-205ENST00000473883 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
HCLS1-205ENST00000473883 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
HCLS1-205ENST00000473883 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
HCLS1-205ENST00000473883 NEFMP07197 916 aa17.1■□□□□ 0.33
HCLS1-205ENST00000473883 KCNA4P22459 653 aa17.09■□□□□ 0.33
HCLS1-205ENST00000473883 ITGAEP38570 1179 aa17.08■□□□□ 0.33
HCLS1-205ENST00000473883 CNPY4Q8N129 248 aa17.06■□□□□ 0.32
HCLS1-205ENST00000473883 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
HCLS1-205ENST00000473883 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.31
HCLS1-205ENST00000473883 FOXD1Q16676 465 aa17■□□□□ 0.31
HCLS1-205ENST00000473883 TICAM2Q86XR7 235 aa16.98■□□□□ 0.31
HCLS1-205ENST00000473883 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
HCLS1-205ENST00000473883 CCDC9Q9Y3X0 531 aaKnown RBP16.98■□□□□ 0.31
HCLS1-205ENST00000473883 IPO9Q96P70 1041 aaKnown RBP16.98■□□□□ 0.31
HCLS1-205ENST00000473883 GSE1Q14687 1217 aa16.97■□□□□ 0.31
HCLS1-205ENST00000473883 ZNF830Q96NB3 372 aaPredicted RBP16.96■□□□□ 0.31
HCLS1-205ENST00000473883 KCNG1Q9UIX4 513 aa16.96■□□□□ 0.31
HCLS1-205ENST00000473883 TMEM132AQ24JP5 1023 aa16.95■□□□□ 0.3
HCLS1-205ENST00000473883 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
HCLS1-205ENST00000473883 HMGB1P09429 215 aaKnown RBP16.93■□□□□ 0.3
HCLS1-205ENST00000473883 TMEM51Q9NW97 253 aa16.93■□□□□ 0.3
HCLS1-205ENST00000473883 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
HCLS1-205ENST00000473883 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
HCLS1-205ENST00000473883 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
HCLS1-205ENST00000473883 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.91■□□□□ 0.3
HCLS1-205ENST00000473883 GRIPAP1Q4V328 841 aa16.88■□□□□ 0.29
HCLS1-205ENST00000473883 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
HCLS1-205ENST00000473883 SMAP1Q8IYB5 467 aaPredicted RBP16.86■□□□□ 0.29
HCLS1-205ENST00000473883 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
HCLS1-205ENST00000473883 ARID3AQ99856 593 aa16.85■□□□□ 0.29
HCLS1-205ENST00000473883 IGSF3O75054 1194 aa16.85■□□□□ 0.29
HCLS1-205ENST00000473883 ANP32AP39687 249 aaKnown RBP16.85■□□□□ 0.29
HCLS1-205ENST00000473883 MMP14P50281 582 aa16.84■□□□□ 0.29
HCLS1-205ENST00000473883 CLGNO14967 610 aa16.83■□□□□ 0.28
HCLS1-205ENST00000473883 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
HCLS1-205ENST00000473883 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
HCLS1-205ENST00000473883 RRAGDQ9NQL2 400 aaPredicted RBP16.8■□□□□ 0.28
HCLS1-205ENST00000473883 CLSTN1O94985 981 aa16.79■□□□□ 0.28
HCLS1-205ENST00000473883 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
HCLS1-205ENST00000473883 IRX3P78415 501 aaPredicted RBP16.77■□□□□ 0.28
HCLS1-205ENST00000473883 ANP32BQ92688 251 aaKnown RBP16.76■□□□□ 0.27
HCLS1-205ENST00000473883 FAM193AP78312 1265 aa16.76■□□□□ 0.27
HCLS1-205ENST00000473883 TPM2P07951 284 aa16.74■□□□□ 0.27
HCLS1-205ENST00000473883 CLCN1P35523 988 aa16.74■□□□□ 0.27
HCLS1-205ENST00000473883 DDRGK1Q96HY6 314 aa16.74■□□□□ 0.27
HCLS1-205ENST00000473883 MCCP23508 829 aa16.73■□□□□ 0.27
HCLS1-205ENST00000473883 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
HCLS1-205ENST00000473883 ZNF592Q92610 1267 aa16.72■□□□□ 0.27
HCLS1-205ENST00000473883 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
HCLS1-205ENST00000473883 ZNF622Q969S3 477 aaKnown RBP eCLIP16.71■□□□□ 0.272e-6■■■□□ 16.5
HCLS1-205ENST00000473883 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
HCLS1-205ENST00000473883 PLCD4Q9BRC7 762 aa16.7■□□□□ 0.26
HCLS1-205ENST00000473883 AXDND1Q5T1B0 1012 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms