RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 DCAF8Q5TAQ9 597 aa8.76□□□□□ -1.01
CLCC1-208ENST00000473062 DCAF8L2P0C7V8 631 aa8.75□□□□□ -1.01
CLCC1-208ENST00000473062 PIP4P2Q8N4L2 257 aa8.72□□□□□ -1.01
CLCC1-208ENST00000473062 CHADLQ6NUI6 762 aa8.71□□□□□ -1.02
CLCC1-208ENST00000473062 CHRM1P11229 460 aaPredicted RBP8.68□□□□□ -1.02
CLCC1-208ENST00000473062 RASEFQ8IZ41 740 aa8.67□□□□□ -1.02
CLCC1-208ENST00000473062 RIOK3O14730 519 aaKnown RBP8.62□□□□□ -1.03
CLCC1-208ENST00000473062 TSPYL2Q9H2G4 693 aaPredicted RBP8.62□□□□□ -1.03
CLCC1-208ENST00000473062 ZNF467Q7Z7K2 595 aaPredicted RBP8.61□□□□□ -1.03
CLCC1-208ENST00000473062 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.61□□□□□ -1.03
CLCC1-208ENST00000473062 RGL2O15211 777 aa8.6□□□□□ -1.03
CLCC1-208ENST00000473062 VGFO15240 615 aaPredicted RBP8.59□□□□□ -1.03
CLCC1-208ENST00000473062 CD44P16070 742 aaKnown RBP8.57□□□□□ -1.04
CLCC1-208ENST00000473062 SGIP1Q9BQI5 828 aa8.57□□□□□ -1.04
CLCC1-208ENST00000473062 PYGBP11216 843 aa8.56□□□□□ -1.04
CLCC1-208ENST00000473062 BBXQ8WY36 941 aaPredicted RBP8.56□□□□□ -1.04
CLCC1-208ENST00000473062 SLC24A1O60721 1099 aa8.55□□□□□ -1.04
CLCC1-208ENST00000473062 CCDC61Q9Y6R9 512 aa8.55□□□□□ -1.04
CLCC1-208ENST00000473062 CLCN6P51797 869 aa8.54□□□□□ -1.04
CLCC1-208ENST00000473062 HS6ST3Q8IZP7 471 aa8.54□□□□□ -1.04
CLCC1-208ENST00000473062 CHGAP10645 457 aaKnown RBP8.53□□□□□ -1.04
CLCC1-208ENST00000473062 ZRANB1Q9UGI0 708 aa8.53□□□□□ -1.04
CLCC1-208ENST00000473062 HAX1O00165 279 aa8.52□□□□□ -1.05
CLCC1-208ENST00000473062 ZNF579Q8NAF0 562 aaKnown RBP8.52□□□□□ -1.05
CLCC1-208ENST00000473062 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
CLCC1-208ENST00000473062 POTEMA6NI47 508 aa8.5□□□□□ -1.05
CLCC1-208ENST00000473062 PDAP1Q13442 181 aaKnown RBP8.5□□□□□ -1.05
CLCC1-208ENST00000473062 C19orf67A6NJJ6 358 aa8.49□□□□□ -1.05
CLCC1-208ENST00000473062 STK25O00506 426 aa8.49□□□□□ -1.05
CLCC1-208ENST00000473062 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
CLCC1-208ENST00000473062 RNF25Q96BH1 459 aaPredicted RBP8.49□□□□□ -1.05
CLCC1-208ENST00000473062 PCDHB13Q9Y5F0 798 aa8.49□□□□□ -1.05
CLCC1-208ENST00000473062 DNAJC5Q9H3Z4 198 aa8.48□□□□□ -1.05
CLCC1-208ENST00000473062 PCDH10Q9P2E7 1040 aa8.47□□□□□ -1.05
CLCC1-208ENST00000473062 KIF12Q96FN5 646 aa8.46□□□□□ -1.06
CLCC1-208ENST00000473062 SPRYD3Q8NCJ5 442 aa8.44□□□□□ -1.06
CLCC1-208ENST00000473062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
CLCC1-208ENST00000473062 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
CLCC1-208ENST00000473062 BCL11BQ9C0K0 894 aaPredicted RBP8.43□□□□□ -1.06
CLCC1-208ENST00000473062 STK24Q9Y6E0 443 aa8.43□□□□□ -1.06
CLCC1-208ENST00000473062 MAP3K13O43283 966 aa8.42□□□□□ -1.06
CLCC1-208ENST00000473062 PSEN1P49768 467 aa8.41□□□□□ -1.06
CLCC1-208ENST00000473062 PCDHB8Q9UN66 801 aa8.4□□□□□ -1.06
CLCC1-208ENST00000473062 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
CLCC1-208ENST00000473062 POTEGQ6S5H5 508 aa8.39□□□□□ -1.07
CLCC1-208ENST00000473062 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
CLCC1-208ENST00000473062 IFNL1Q8IU54 200 aa8.39□□□□□ -1.07
CLCC1-208ENST00000473062 PHF12Q96QT6 1004 aa8.39□□□□□ -1.07
CLCC1-208ENST00000473062 CFAP44Q96MT7 982 aa8.38□□□□□ -1.07
CLCC1-208ENST00000473062 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
CLCC1-208ENST00000473062 TIE1P35590 1138 aa8.33□□□□□ -1.08
CLCC1-208ENST00000473062 SOX12O15370 315 aa8.32□□□□□ -1.08
CLCC1-208ENST00000473062 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
CLCC1-208ENST00000473062 TMEM106CQ9BVX2 250 aa8.31□□□□□ -1.08
CLCC1-208ENST00000473062 NLRP6P59044 892 aa8.29□□□□□ -1.08
CLCC1-208ENST00000473062 EVX2Q03828 476 aa8.29□□□□□ -1.08
CLCC1-208ENST00000473062 MKRN3Q13064 507 aaKnown RBP8.29□□□□□ -1.08
CLCC1-208ENST00000473062 VSIG10Q8N0Z9 540 aa8.29□□□□□ -1.08
CLCC1-208ENST00000473062 CABP2Q9NPB3 220 aa8.29□□□□□ -1.08
CLCC1-208ENST00000473062 GTPBP6O43824 516 aaPredicted RBP8.26□□□□□ -1.09
CLCC1-208ENST00000473062 NKX1-1Q15270 411 aaPredicted RBP8.26□□□□□ -1.09
CLCC1-208ENST00000473062 TTLL13PA6NNM8 815 aa8.23□□□□□ -1.09
CLCC1-208ENST00000473062 EFCAB3Q8N7B9 438 aa8.23□□□□□ -1.09
CLCC1-208ENST00000473062 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
CLCC1-208ENST00000473062 IER5LQ5T953 404 aa8.22□□□□□ -1.09
CLCC1-208ENST00000473062 DCBLD2Q96PD2 775 aa8.21□□□□□ -1.1
CLCC1-208ENST00000473062 BMP2KQ9NSY1 1161 aaPredicted RBP8.21□□□□□ -1.1
CLCC1-208ENST00000473062 MFRPQ9BY79 579 aa8.2□□□□□ -1.1
CLCC1-208ENST00000473062 TRIM35Q9UPQ4 493 aa8.19□□□□□ -1.1
CLCC1-208ENST00000473062 GABBR2O75899 941 aa8.18□□□□□ -1.1
CLCC1-208ENST00000473062 ASTLQ6HA08 431 aaPredicted RBP8.17□□□□□ -1.1
CLCC1-208ENST00000473062 G3V3G9 751 aa8.16□□□□□ -1.1
CLCC1-208ENST00000473062 FBXO22Q8NEZ5 403 aa8.16□□□□□ -1.1
CLCC1-208ENST00000473062 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
CLCC1-208ENST00000473062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.16□□□□□ -1.11e-6■■□□□ 13.3
CLCC1-208ENST00000473062 PHF8Q9UPP1 1060 aa8.16□□□□□ -1.1
CLCC1-208ENST00000473062 ATMINO43313 823 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-208ENST00000473062 TRPC6Q9Y210 931 aa8.14□□□□□ -1.11
CLCC1-208ENST00000473062 WDR70Q9NW82 654 aa8.13□□□□□ -1.11
CLCC1-208ENST00000473062 PLCG2P16885 1265 aa8.12□□□□□ -1.11
CLCC1-208ENST00000473062 SLC39A7Q92504 469 aa8.12□□□□□ -1.11
CLCC1-208ENST00000473062 OCEL1Q9H607 264 aa8.12□□□□□ -1.11
CLCC1-208ENST00000473062 SEC24BO95487 1268 aa8.11□□□□□ -1.11
CLCC1-208ENST00000473062 ATN1P54259 1190 aaPredicted RBP8.11□□□□□ -1.11
CLCC1-208ENST00000473062 C7P10643 843 aa8.1□□□□□ -1.11
CLCC1-208ENST00000473062 ILDR1Q86SU0 546 aaPredicted RBP8.1□□□□□ -1.11
CLCC1-208ENST00000473062 P3H3Q8IVL6 736 aa8.1□□□□□ -1.11
CLCC1-208ENST00000473062 L3MBTL3Q96JM7 780 aaPredicted RBP8.09□□□□□ -1.11
CLCC1-208ENST00000473062 BCANQ96GW7 911 aa8.07□□□□□ -1.12
CLCC1-208ENST00000473062 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
CLCC1-208ENST00000473062 MS4A4AQ96JQ5 239 aa8.06□□□□□ -1.12
CLCC1-208ENST00000473062 PDE4AP27815 886 aa8.05□□□□□ -1.12
CLCC1-208ENST00000473062 KDM2AQ9Y2K7 1162 aa8.04□□□□□ -1.12
CLCC1-208ENST00000473062 PPP1R37O75864 691 aa8.02□□□□□ -1.13
CLCC1-208ENST00000473062 NBR1Q14596 966 aa8.02□□□□□ -1.13
CLCC1-208ENST00000473062 PDCD7Q8N8D1 485 aaKnown RBP8.02□□□□□ -1.13
CLCC1-208ENST00000473062 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
CLCC1-208ENST00000473062 BOLA1Q9Y3E2 137 aa8.02□□□□□ -1.13
CLCC1-208ENST00000473062 MICALL2Q8IY33 904 aa8□□□□□ -1.13
CLCC1-208ENST00000473062 TMC2Q8TDI7 906 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms