RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.16
LINC02339-201ENST00000472649 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
LINC02339-201ENST00000472649 PHF12Q96QT6 1004 aa14.03□□□□□ -0.16
LINC02339-201ENST00000472649 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
LINC02339-201ENST00000472649 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
LINC02339-201ENST00000472649 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
LINC02339-201ENST00000472649 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
LINC02339-201ENST00000472649 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
LINC02339-201ENST00000472649 CCDC61Q9Y6R9 512 aa13.85□□□□□ -0.19
LINC02339-201ENST00000472649 MAMSTRQ6ZN01 415 aa13.83□□□□□ -0.2
LINC02339-201ENST00000472649 C7P10643 843 aa13.82□□□□□ -0.2
LINC02339-201ENST00000472649 ASTLQ6HA08 431 aaPredicted RBP13.81□□□□□ -0.2
LINC02339-201ENST00000472649 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
LINC02339-201ENST00000472649 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
LINC02339-201ENST00000472649 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
LINC02339-201ENST00000472649 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
LINC02339-201ENST00000472649 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
LINC02339-201ENST00000472649 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
LINC02339-201ENST00000472649 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
LINC02339-201ENST00000472649 LCE2DQ5TA82 110 aaPredicted RBP13.73□□□□□ -0.21
LINC02339-201ENST00000472649 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
LINC02339-201ENST00000472649 MAP3K13O43283 966 aa13.7□□□□□ -0.22
LINC02339-201ENST00000472649 NUBP1P53384 320 aa13.7□□□□□ -0.22
LINC02339-201ENST00000472649 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
LINC02339-201ENST00000472649 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
LINC02339-201ENST00000472649 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
LINC02339-201ENST00000472649 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
LINC02339-201ENST00000472649 TIE1P35590 1138 aa13.64□□□□□ -0.23
LINC02339-201ENST00000472649 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
LINC02339-201ENST00000472649 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
LINC02339-201ENST00000472649 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
LINC02339-201ENST00000472649 BMP2KQ9NSY1 1161 aaPredicted RBP13.6□□□□□ -0.23
LINC02339-201ENST00000472649 TRPC6Q9Y210 931 aa13.53□□□□□ -0.24
LINC02339-201ENST00000472649 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
LINC02339-201ENST00000472649 GSE1Q14687 1217 aa13.52□□□□□ -0.25
LINC02339-201ENST00000472649 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
LINC02339-201ENST00000472649 SEC24BO95487 1268 aa13.5□□□□□ -0.25
LINC02339-201ENST00000472649 IFNL1Q8IU54 200 aa13.5□□□□□ -0.25
LINC02339-201ENST00000472649 CDAN1Q8IWY9 1227 aa13.48□□□□□ -0.25
LINC02339-201ENST00000472649 PYGBP11216 843 aa13.47□□□□□ -0.25
LINC02339-201ENST00000472649 TRIM35Q9UPQ4 493 aa13.47□□□□□ -0.25
LINC02339-201ENST00000472649 IER5LQ5T953 404 aa13.46□□□□□ -0.25
LINC02339-201ENST00000472649 TMEM106CQ9BVX2 250 aa13.45□□□□□ -0.26
LINC02339-201ENST00000472649 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
LINC02339-201ENST00000472649 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
LINC02339-201ENST00000472649 PLCG2P16885 1265 aa13.35□□□□□ -0.27
LINC02339-201ENST00000472649 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
LINC02339-201ENST00000472649 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
LINC02339-201ENST00000472649 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
LINC02339-201ENST00000472649 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
LINC02339-201ENST00000472649 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
LINC02339-201ENST00000472649 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
LINC02339-201ENST00000472649 ST18O60284 1047 aa13.25□□□□□ -0.29
LINC02339-201ENST00000472649 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
LINC02339-201ENST00000472649 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
LINC02339-201ENST00000472649 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
LINC02339-201ENST00000472649 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
LINC02339-201ENST00000472649 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
LINC02339-201ENST00000472649 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
LINC02339-201ENST00000472649 PSEN1P49768 467 aa13.19□□□□□ -0.3
LINC02339-201ENST00000472649 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
LINC02339-201ENST00000472649 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
LINC02339-201ENST00000472649 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
LINC02339-201ENST00000472649 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
LINC02339-201ENST00000472649 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
LINC02339-201ENST00000472649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC02339-201ENST00000472649 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
LINC02339-201ENST00000472649 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
LINC02339-201ENST00000472649 G3V3G9 751 aa13.02□□□□□ -0.33
LINC02339-201ENST00000472649 SNPHO15079 494 aa13.02□□□□□ -0.33
LINC02339-201ENST00000472649 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
LINC02339-201ENST00000472649 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
LINC02339-201ENST00000472649 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
LINC02339-201ENST00000472649 MARVELD3Q96A59 401 aa12.91□□□□□ -0.34
LINC02339-201ENST00000472649 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
LINC02339-201ENST00000472649 ILDR1Q86SU0 546 aaPredicted RBP12.89□□□□□ -0.35
LINC02339-201ENST00000472649 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
LINC02339-201ENST00000472649 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
LINC02339-201ENST00000472649 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
LINC02339-201ENST00000472649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
LINC02339-201ENST00000472649 SOX12O15370 315 aa12.81□□□□□ -0.36
LINC02339-201ENST00000472649 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
LINC02339-201ENST00000472649 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
LINC02339-201ENST00000472649 EMP3P54852 163 aa12.78□□□□□ -0.36
LINC02339-201ENST00000472649 KRTAP3-3Q9BYR6 98 aa12.77□□□□□ -0.37
LINC02339-201ENST00000472649 KRTAP3-2Q9BYR7 98 aa12.77□□□□□ -0.37
LINC02339-201ENST00000472649 ECM2O94769 699 aaPredicted RBP12.76□□□□□ -0.37
LINC02339-201ENST00000472649 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
LINC02339-201ENST00000472649 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
LINC02339-201ENST00000472649 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
LINC02339-201ENST00000472649 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
LINC02339-201ENST00000472649 STK24Q9Y6E0 443 aa12.7□□□□□ -0.38
LINC02339-201ENST00000472649 NLRP6P59044 892 aa12.69□□□□□ -0.38
LINC02339-201ENST00000472649 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
LINC02339-201ENST00000472649 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
LINC02339-201ENST00000472649 STK25O00506 426 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 MICALL2Q8IY33 904 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 RIMBP2O15034 1052 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms