RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CCDC61Q9Y6R9 512 aa15.76■□□□□ 0.11
CD46-213ENST00000471987 PLSCR2Q9NRY7 297 aa15.74■□□□□ 0.11
CD46-213ENST00000471987 GALR2O43603 387 aaPredicted RBP15.73■□□□□ 0.11
CD46-213ENST00000471987 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
CD46-213ENST00000471987 DCBLD2Q96PD2 775 aa15.7■□□□□ 0.1
CD46-213ENST00000471987 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
CD46-213ENST00000471987 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
CD46-213ENST00000471987 KIF12Q96FN5 646 aa15.63■□□□□ 0.09
CD46-213ENST00000471987 MS4A3Q96HJ5 214 aa15.63■□□□□ 0.09
CD46-213ENST00000471987 IFNLR1Q8IU57 520 aaPredicted RBP15.59■□□□□ 0.09
CD46-213ENST00000471987 DCAF8Q5TAQ9 597 aa15.58■□□□□ 0.08
CD46-213ENST00000471987 MAP3K13O43283 966 aa15.56■□□□□ 0.08
CD46-213ENST00000471987 SPOCK2Q92563 424 aa15.52■□□□□ 0.08
CD46-213ENST00000471987 SGIP1Q9BQI5 828 aa15.51■□□□□ 0.07
CD46-213ENST00000471987 GSE1Q14687 1217 aa15.5■□□□□ 0.07
CD46-213ENST00000471987 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
CD46-213ENST00000471987 ASTLQ6HA08 431 aaPredicted RBP15.45■□□□□ 0.06
CD46-213ENST00000471987 ATMINO43313 823 aaPredicted RBP15.42■□□□□ 0.06
CD46-213ENST00000471987 PYGBP11216 843 aa15.42■□□□□ 0.06
CD46-213ENST00000471987 TIE1P35590 1138 aa15.4■□□□□ 0.06
CD46-213ENST00000471987 TRPC6Q9Y210 931 aa15.39■□□□□ 0.05
CD46-213ENST00000471987 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
CD46-213ENST00000471987 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
CD46-213ENST00000471987 BMP2KQ9NSY1 1161 aaPredicted RBP15.36■□□□□ 0.05
CD46-213ENST00000471987 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
CD46-213ENST00000471987 ATN1P54259 1190 aaPredicted RBP15.34■□□□□ 0.05
CD46-213ENST00000471987 CHRM1P11229 460 aaPredicted RBP15.32■□□□□ 0.04
CD46-213ENST00000471987 SLC39A7Q92504 469 aa15.31■□□□□ 0.04
CD46-213ENST00000471987 TTLL13PA6NNM8 815 aa15.3■□□□□ 0.04
CD46-213ENST00000471987 C7P10643 843 aa15.29■□□□□ 0.04
CD46-213ENST00000471987 METRNQ9UJH8 293 aa15.27■□□□□ 0.04
CD46-213ENST00000471987 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
CD46-213ENST00000471987 PCDHB8Q9UN66 801 aa15.25■□□□□ 0.03
CD46-213ENST00000471987 TMEM106CQ9BVX2 250 aa15.24■□□□□ 0.03
CD46-213ENST00000471987 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
CD46-213ENST00000471987 TRIM35Q9UPQ4 493 aa15.21■□□□□ 0.03
CD46-213ENST00000471987 IER5LQ5T953 404 aa15.15■□□□□ 0.02
CD46-213ENST00000471987 POTEB2H3BUK9 544 aa15.13■□□□□ 0.01
CD46-213ENST00000471987 SEC24BO95487 1268 aa15.1■□□□□ 0.01
CD46-213ENST00000471987 PSEN1P49768 467 aa15.08■□□□□ 0
CD46-213ENST00000471987 PDAP1Q13442 181 aaKnown RBP15.08■□□□□ 0
CD46-213ENST00000471987 POTEFA5A3E0 1075 aa15.06■□□□□ 0
CD46-213ENST00000471987 COLQQ9Y215 455 aaPredicted RBP15.04■□□□□ -0
CD46-213ENST00000471987 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
CD46-213ENST00000471987 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
CD46-213ENST00000471987 MAMSTRQ6ZN01 415 aa15□□□□□ -0.01
CD46-213ENST00000471987 PLCG2P16885 1265 aa14.99□□□□□ -0.01
CD46-213ENST00000471987 POTEJP0CG39 1038 aa14.97□□□□□ -0.01
CD46-213ENST00000471987 IRX5P78411 483 aaPredicted RBP14.97□□□□□ -0.01
CD46-213ENST00000471987 MKRN3Q13064 507 aaKnown RBP14.96□□□□□ -0.01
CD46-213ENST00000471987 POTEMA6NI47 508 aa14.95□□□□□ -0.02
CD46-213ENST00000471987 RIOK3O14730 519 aaKnown RBP14.95□□□□□ -0.02
CD46-213ENST00000471987 OCEL1Q9H607 264 aa14.94□□□□□ -0.02
CD46-213ENST00000471987 RNF25Q96BH1 459 aaPredicted RBP14.93□□□□□ -0.02
CD46-213ENST00000471987 SCUBE2Q9NQ36 999 aa14.93□□□□□ -0.02
CD46-213ENST00000471987 CABP2Q9NPB3 220 aa14.9□□□□□ -0.02
CD46-213ENST00000471987 ECM2O94769 699 aaPredicted RBP14.89□□□□□ -0.03
CD46-213ENST00000471987 VGFO15240 615 aaPredicted RBP14.88□□□□□ -0.03
CD46-213ENST00000471987 PKD2Q13563 968 aa14.87□□□□□ -0.03
CD46-213ENST00000471987 POTEGQ6S5H5 508 aa14.86□□□□□ -0.03
CD46-213ENST00000471987 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
CD46-213ENST00000471987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.85□□□□□ -0.031e-15■□□□□ 10.7
CD46-213ENST00000471987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.82□□□□□ -0.04
CD46-213ENST00000471987 ZFP91Q96JP5 570 aaPredicted RBP14.82□□□□□ -0.04
CD46-213ENST00000471987 PDCD7Q8N8D1 485 aaKnown RBP14.81□□□□□ -0.04
CD46-213ENST00000471987 ILDR1Q86SU0 546 aaPredicted RBP14.77□□□□□ -0.05
CD46-213ENST00000471987 EFCAB3Q8N7B9 438 aa14.76□□□□□ -0.05
CD46-213ENST00000471987 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
CD46-213ENST00000471987 RGL2O15211 777 aa14.73□□□□□ -0.05
CD46-213ENST00000471987 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
CD46-213ENST00000471987 BCL11BQ9C0K0 894 aaPredicted RBP14.69□□□□□ -0.06
CD46-213ENST00000471987 SOX12O15370 315 aa14.68□□□□□ -0.06
CD46-213ENST00000471987 SLAIN1Q8ND83 568 aa14.68□□□□□ -0.06
CD46-213ENST00000471987 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.67□□□□□ -0.06
CD46-213ENST00000471987 STK25O00506 426 aa14.66□□□□□ -0.06
CD46-213ENST00000471987 DPY19L2Q6NUT2 758 aa14.66□□□□□ -0.06
CD46-213ENST00000471987 STK24Q9Y6E0 443 aa14.66□□□□□ -0.06
CD46-213ENST00000471987 C3orf67Q6ZVT6 689 aa14.65□□□□□ -0.06
CD46-213ENST00000471987 G3V3G9 751 aa14.63□□□□□ -0.07
CD46-213ENST00000471987 BOLA1Q9Y3E2 137 aa14.6□□□□□ -0.07
CD46-213ENST00000471987 PHF8Q9UPP1 1060 aa14.58□□□□□ -0.08
CD46-213ENST00000471987 NLRP6P59044 892 aa14.55□□□□□ -0.08
CD46-213ENST00000471987 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
CD46-213ENST00000471987 MS4A4AQ96JQ5 239 aa14.53□□□□□ -0.08
CD46-213ENST00000471987 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
CD46-213ENST00000471987 FBXO22Q8NEZ5 403 aa14.49□□□□□ -0.09
CD46-213ENST00000471987 MFRPQ9BY79 579 aa14.49□□□□□ -0.09
CD46-213ENST00000471987 SNPHO15079 494 aa14.48□□□□□ -0.09
CD46-213ENST00000471987 LCE2DQ5TA82 110 aaPredicted RBP14.46□□□□□ -0.09
CD46-213ENST00000471987 MICALL2Q8IY33 904 aa14.46□□□□□ -0.09
CD46-213ENST00000471987 HS6ST3Q8IZP7 471 aa14.46□□□□□ -0.09
CD46-213ENST00000471987 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
CD46-213ENST00000471987 ST18O60284 1047 aa14.38□□□□□ -0.11
CD46-213ENST00000471987 DNAJC5Q9H3Z4 198 aa14.31□□□□□ -0.12
CD46-213ENST00000471987 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
CD46-213ENST00000471987 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
CD46-213ENST00000471987 PPP1R37O75864 691 aa14.24□□□□□ -0.13
CD46-213ENST00000471987 HOXB3P14651 431 aaPredicted RBP14.24□□□□□ -0.13
CD46-213ENST00000471987 DOK7Q18PE1 504 aa14.24□□□□□ -0.13
CD46-213ENST00000471987 RYDENQ9NUL5 291 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms