RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
ITGA6-209ENST00000470259 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
ITGA6-209ENST00000470259 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
ITGA6-209ENST00000470259 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
ITGA6-209ENST00000470259 IFNLR1Q8IU57 520 aaPredicted RBP12.54□□□□□ -0.4
ITGA6-209ENST00000470259 DCBLD2Q96PD2 775 aa12.53□□□□□ -0.4
ITGA6-209ENST00000470259 SPOCK2Q92563 424 aa12.5□□□□□ -0.41
ITGA6-209ENST00000470259 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
ITGA6-209ENST00000470259 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
ITGA6-209ENST00000470259 MAP3K13O43283 966 aa12.46□□□□□ -0.41
ITGA6-209ENST00000470259 GSE1Q14687 1217 aa12.44□□□□□ -0.42
ITGA6-209ENST00000470259 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
ITGA6-209ENST00000470259 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
ITGA6-209ENST00000470259 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
ITGA6-209ENST00000470259 PYGBP11216 843 aa12.4□□□□□ -0.42
ITGA6-209ENST00000470259 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
ITGA6-209ENST00000470259 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
ITGA6-209ENST00000470259 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
ITGA6-209ENST00000470259 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
ITGA6-209ENST00000470259 TIE1P35590 1138 aa12.27□□□□□ -0.45
ITGA6-209ENST00000470259 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
ITGA6-209ENST00000470259 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
ITGA6-209ENST00000470259 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
ITGA6-209ENST00000470259 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
ITGA6-209ENST00000470259 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
ITGA6-209ENST00000470259 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
ITGA6-209ENST00000470259 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
ITGA6-209ENST00000470259 TTLL13PA6NNM8 815 aa12.21□□□□□ -0.45
ITGA6-209ENST00000470259 TMEM106CQ9BVX2 250 aa12.21□□□□□ -0.45
ITGA6-209ENST00000470259 LHX8Q68G74 356 aa12.2□□□□□ -0.46
ITGA6-209ENST00000470259 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
ITGA6-209ENST00000470259 SLC39A7Q92504 469 aa12.19□□□□□ -0.46
ITGA6-209ENST00000470259 C7P10643 843 aa12.17□□□□□ -0.46
ITGA6-209ENST00000470259 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
ITGA6-209ENST00000470259 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
ITGA6-209ENST00000470259 SEC24BO95487 1268 aa12.1□□□□□ -0.47
ITGA6-209ENST00000470259 PSEN1P49768 467 aa12.1□□□□□ -0.47
ITGA6-209ENST00000470259 PDAP1Q13442 181 aaKnown RBP12.08□□□□□ -0.48
ITGA6-209ENST00000470259 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
ITGA6-209ENST00000470259 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
ITGA6-209ENST00000470259 IER5LQ5T953 404 aa12.05□□□□□ -0.48
ITGA6-209ENST00000470259 POTEB2H3BUK9 544 aa12.02□□□□□ -0.49
ITGA6-209ENST00000470259 RIOK3O14730 519 aaKnown RBP12.02□□□□□ -0.49
ITGA6-209ENST00000470259 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
ITGA6-209ENST00000470259 PLCG2P16885 1265 aa12□□□□□ -0.49
ITGA6-209ENST00000470259 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
ITGA6-209ENST00000470259 PKD2Q13563 968 aa11.99□□□□□ -0.49
ITGA6-209ENST00000470259 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
ITGA6-209ENST00000470259 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
ITGA6-209ENST00000470259 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
ITGA6-209ENST00000470259 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
ITGA6-209ENST00000470259 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
ITGA6-209ENST00000470259 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
ITGA6-209ENST00000470259 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
ITGA6-209ENST00000470259 MAMSTRQ6ZN01 415 aa11.93□□□□□ -0.5
ITGA6-209ENST00000470259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.92□□□□□ -0.5
ITGA6-209ENST00000470259 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
ITGA6-209ENST00000470259 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
ITGA6-209ENST00000470259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.56e-9■□□□□ 10
ITGA6-209ENST00000470259 RGL2O15211 777 aa11.9□□□□□ -0.5
ITGA6-209ENST00000470259 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
ITGA6-209ENST00000470259 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
ITGA6-209ENST00000470259 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
ITGA6-209ENST00000470259 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
ITGA6-209ENST00000470259 STK25O00506 426 aa11.83□□□□□ -0.52
ITGA6-209ENST00000470259 BCL11BQ9C0K0 894 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-209ENST00000470259 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
ITGA6-209ENST00000470259 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
ITGA6-209ENST00000470259 G3V3G9 751 aa11.77□□□□□ -0.53
ITGA6-209ENST00000470259 SOX12O15370 315 aa11.76□□□□□ -0.53
ITGA6-209ENST00000470259 DPY19L2Q6NUT2 758 aa11.76□□□□□ -0.53
ITGA6-209ENST00000470259 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.74□□□□□ -0.53
ITGA6-209ENST00000470259 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
ITGA6-209ENST00000470259 ILDR1Q86SU0 546 aaPredicted RBP11.73□□□□□ -0.53
ITGA6-209ENST00000470259 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
ITGA6-209ENST00000470259 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
ITGA6-209ENST00000470259 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
ITGA6-209ENST00000470259 NLRP6P59044 892 aa11.69□□□□□ -0.54
ITGA6-209ENST00000470259 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
ITGA6-209ENST00000470259 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
ITGA6-209ENST00000470259 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
ITGA6-209ENST00000470259 FAM163AQ96GL9 167 aaPredicted RBP11.63□□□□□ -0.55
ITGA6-209ENST00000470259 MS4A4AQ96JQ5 239 aa11.63□□□□□ -0.55
ITGA6-209ENST00000470259 MFRPQ9BY79 579 aa11.62□□□□□ -0.55
ITGA6-209ENST00000470259 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
ITGA6-209ENST00000470259 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
ITGA6-209ENST00000470259 MICALL2Q8IY33 904 aa11.58□□□□□ -0.56
ITGA6-209ENST00000470259 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
ITGA6-209ENST00000470259 SNPHO15079 494 aa11.54□□□□□ -0.56
ITGA6-209ENST00000470259 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.57
ITGA6-209ENST00000470259 POTEMA6NI47 508 aa11.46□□□□□ -0.57
ITGA6-209ENST00000470259 PPP1R37O75864 691 aa11.46□□□□□ -0.57
ITGA6-209ENST00000470259 ST18O60284 1047 aa11.45□□□□□ -0.58
ITGA6-209ENST00000470259 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
ITGA6-209ENST00000470259 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
ITGA6-209ENST00000470259 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
ITGA6-209ENST00000470259 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
ITGA6-209ENST00000470259 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
ITGA6-209ENST00000470259 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
ITGA6-209ENST00000470259 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms