RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
FAM49A-205ENST00000469507 MS4A3Q96HJ5 214 aa10.68□□□□□ -0.7
FAM49A-205ENST00000469507 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
FAM49A-205ENST00000469507 HAP1P54257 671 aaPredicted RBP10.64□□□□□ -0.71
FAM49A-205ENST00000469507 BCANQ96GW7 911 aa10.64□□□□□ -0.71
FAM49A-205ENST00000469507 ASTLQ6HA08 431 aaPredicted RBP10.63□□□□□ -0.71
FAM49A-205ENST00000469507 PROM2Q8N271 834 aa10.63□□□□□ -0.71
FAM49A-205ENST00000469507 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
FAM49A-205ENST00000469507 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
FAM49A-205ENST00000469507 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
FAM49A-205ENST00000469507 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
FAM49A-205ENST00000469507 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
FAM49A-205ENST00000469507 C7P10643 843 aa10.56□□□□□ -0.72
FAM49A-205ENST00000469507 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
FAM49A-205ENST00000469507 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
FAM49A-205ENST00000469507 POTEMA6NI47 508 aa10.55□□□□□ -0.72
FAM49A-205ENST00000469507 PRKCSHP14314 528 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-205ENST00000469507 ATN1P54259 1190 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-205ENST00000469507 POTEGQ6S5H5 508 aa10.52□□□□□ -0.73
FAM49A-205ENST00000469507 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
FAM49A-205ENST00000469507 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
FAM49A-205ENST00000469507 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
FAM49A-205ENST00000469507 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
FAM49A-205ENST00000469507 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
FAM49A-205ENST00000469507 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
FAM49A-205ENST00000469507 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
FAM49A-205ENST00000469507 MAP3K13O43283 966 aa10.45□□□□□ -0.74
FAM49A-205ENST00000469507 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
FAM49A-205ENST00000469507 RASEFQ8IZ41 740 aa10.45□□□□□ -0.74
FAM49A-205ENST00000469507 MIER1Q8N108 512 aa10.45□□□□□ -0.74
FAM49A-205ENST00000469507 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
FAM49A-205ENST00000469507 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
FAM49A-205ENST00000469507 PKD2Q13563 968 aa10.41□□□□□ -0.74
FAM49A-205ENST00000469507 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
FAM49A-205ENST00000469507 TIE1P35590 1138 aa10.4□□□□□ -0.74
FAM49A-205ENST00000469507 SCUBE2Q9NQ36 999 aa10.4□□□□□ -0.74
FAM49A-205ENST00000469507 FAM163AQ96GL9 167 aaPredicted RBP10.37□□□□□ -0.75
FAM49A-205ENST00000469507 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
FAM49A-205ENST00000469507 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
FAM49A-205ENST00000469507 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
FAM49A-205ENST00000469507 BBXQ8WY36 941 aaPredicted RBP10.34□□□□□ -0.75
FAM49A-205ENST00000469507 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
FAM49A-205ENST00000469507 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
FAM49A-205ENST00000469507 PCDH10Q9P2E7 1040 aa10.33□□□□□ -0.76
FAM49A-205ENST00000469507 KDM2AQ9Y2K7 1162 aa10.32□□□□□ -0.76
FAM49A-205ENST00000469507 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
FAM49A-205ENST00000469507 SEC24BO95487 1268 aa10.29□□□□□ -0.76
FAM49A-205ENST00000469507 NUBP1P53384 320 aa10.29□□□□□ -0.76
FAM49A-205ENST00000469507 TRIM35Q9UPQ4 493 aa10.29□□□□□ -0.76
FAM49A-205ENST00000469507 SGIP1Q9BQI5 828 aa10.27□□□□□ -0.77
FAM49A-205ENST00000469507 IFNL1Q8IU54 200 aa10.25□□□□□ -0.77
FAM49A-205ENST00000469507 IER5LQ5T953 404 aa10.24□□□□□ -0.77
FAM49A-205ENST00000469507 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
FAM49A-205ENST00000469507 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
FAM49A-205ENST00000469507 CFAP44Q96MT7 982 aa10.21□□□□□ -0.77
FAM49A-205ENST00000469507 SPOCK2Q92563 424 aa10.2□□□□□ -0.78
FAM49A-205ENST00000469507 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
FAM49A-205ENST00000469507 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
FAM49A-205ENST00000469507 FAM212AQ96EL1 285 aa10.19□□□□□ -0.78
FAM49A-205ENST00000469507 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
FAM49A-205ENST00000469507 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
FAM49A-205ENST00000469507 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
FAM49A-205ENST00000469507 PLCG2P16885 1265 aa10.13□□□□□ -0.79
FAM49A-205ENST00000469507 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
FAM49A-205ENST00000469507 CDAN1Q8IWY9 1227 aa10.13□□□□□ -0.79
FAM49A-205ENST00000469507 ST18O60284 1047 aa10.11□□□□□ -0.79
FAM49A-205ENST00000469507 PYGBP11216 843 aa10.1□□□□□ -0.79
FAM49A-205ENST00000469507 TSHZ2Q9NRE2 1034 aa10.1□□□□□ -0.79
FAM49A-205ENST00000469507 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
FAM49A-205ENST00000469507 RGL2O15211 777 aa10.06□□□□□ -0.8
FAM49A-205ENST00000469507 OCEL1Q9H607 264 aa10.06□□□□□ -0.8
FAM49A-205ENST00000469507 PCDHB8Q9UN66 801 aa10.06□□□□□ -0.8
FAM49A-205ENST00000469507 DNAJC5Q9H3Z4 198 aa10□□□□□ -0.81
FAM49A-205ENST00000469507 NBR1Q14596 966 aa9.99□□□□□ -0.81
FAM49A-205ENST00000469507 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.97□□□□□ -0.81
FAM49A-205ENST00000469507 CHGAP10645 457 aaKnown RBP9.96□□□□□ -0.82
FAM49A-205ENST00000469507 PDCD7Q8N8D1 485 aaKnown RBP9.95□□□□□ -0.82
FAM49A-205ENST00000469507 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
FAM49A-205ENST00000469507 TMEM121BQ9BXQ6 578 aaPredicted RBP9.94□□□□□ -0.82
FAM49A-205ENST00000469507 SNPHO15079 494 aa9.93□□□□□ -0.82
FAM49A-205ENST00000469507 TIMELESSQ9UNS1 1208 aa9.93□□□□□ -0.82
FAM49A-205ENST00000469507 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
FAM49A-205ENST00000469507 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
FAM49A-205ENST00000469507 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
FAM49A-205ENST00000469507 GSE1Q14687 1217 aa9.9□□□□□ -0.82
FAM49A-205ENST00000469507 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
FAM49A-205ENST00000469507 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.82
FAM49A-205ENST00000469507 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
FAM49A-205ENST00000469507 MKRN3Q13064 507 aaKnown RBP9.88□□□□□ -0.83
FAM49A-205ENST00000469507 GOLGA2Q08379 1002 aa9.87□□□□□ -0.83
FAM49A-205ENST00000469507 C3orf67Q6ZVT6 689 aa9.87□□□□□ -0.83
FAM49A-205ENST00000469507 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
FAM49A-205ENST00000469507 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
FAM49A-205ENST00000469507 PSEN1P49768 467 aa9.86□□□□□ -0.83
FAM49A-205ENST00000469507 HS6ST3Q8IZP7 471 aa9.85□□□□□ -0.83
FAM49A-205ENST00000469507 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
FAM49A-205ENST00000469507 L3MBTL3Q96JM7 780 aaPredicted RBP9.85□□□□□ -0.83
FAM49A-205ENST00000469507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
FAM49A-205ENST00000469507 ARXQ96QS3 562 aa9.84□□□□□ -0.83
FAM49A-205ENST00000469507 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms