RNA–Protein interactions for RNA: ENST00000469200.1

CNIH4-207, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-207ENST00000469200 NUBP1P53384 320 aa9.43□□□□□ -0.9
CNIH4-207ENST00000469200 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
CNIH4-207ENST00000469200 CHRM1P11229 460 aaPredicted RBP9.39□□□□□ -0.91
CNIH4-207ENST00000469200 RIOK3O14730 519 aaKnown RBP9.38□□□□□ -0.91
CNIH4-207ENST00000469200 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
CNIH4-207ENST00000469200 TSHZ2Q9NRE2 1034 aa9.38□□□□□ -0.91
CNIH4-207ENST00000469200 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
CNIH4-207ENST00000469200 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
CNIH4-207ENST00000469200 VGFO15240 615 aaPredicted RBP9.34□□□□□ -0.91
CNIH4-207ENST00000469200 SGIP1Q9BQI5 828 aa9.34□□□□□ -0.91
CNIH4-207ENST00000469200 CREBZFQ9NS37 354 aa9.34□□□□□ -0.91
CNIH4-207ENST00000469200 RYDENQ9NUL5 291 aaKnown RBP9.34□□□□□ -0.91
CNIH4-207ENST00000469200 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
CNIH4-207ENST00000469200 REM2Q8IYK8 340 aaPredicted RBP9.31□□□□□ -0.92
CNIH4-207ENST00000469200 CLEC11AQ9Y240 323 aa9.31□□□□□ -0.92
CNIH4-207ENST00000469200 STK25O00506 426 aa9.26□□□□□ -0.93
CNIH4-207ENST00000469200 NBR1Q14596 966 aa9.26□□□□□ -0.93
CNIH4-207ENST00000469200 GTPBP6O43824 516 aaPredicted RBP9.25□□□□□ -0.93
CNIH4-207ENST00000469200 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
CNIH4-207ENST00000469200 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
CNIH4-207ENST00000469200 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
CNIH4-207ENST00000469200 RASEFQ8IZ41 740 aa9.22□□□□□ -0.93
CNIH4-207ENST00000469200 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.17□□□□□ -0.94
CNIH4-207ENST00000469200 PITPNM1O00562 1244 aa9.17□□□□□ -0.94
CNIH4-207ENST00000469200 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
CNIH4-207ENST00000469200 BCL11BQ9C0K0 894 aaPredicted RBP9.17□□□□□ -0.94
CNIH4-207ENST00000469200 STK24Q9Y6E0 443 aa9.17□□□□□ -0.94
CNIH4-207ENST00000469200 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
CNIH4-207ENST00000469200 PYGBP11216 843 aa9.13□□□□□ -0.95
CNIH4-207ENST00000469200 P3H3Q8IVL6 736 aa9.1□□□□□ -0.95
CNIH4-207ENST00000469200 PDAP1Q13442 181 aaKnown RBP9.08□□□□□ -0.96
CNIH4-207ENST00000469200 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
CNIH4-207ENST00000469200 ZNF579Q8NAF0 562 aaKnown RBP9.04□□□□□ -0.96
CNIH4-207ENST00000469200 TSPYL2Q9H2G4 693 aaPredicted RBP9.02□□□□□ -0.97
CNIH4-207ENST00000469200 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
CNIH4-207ENST00000469200 PAK3O75914 559 aaPredicted RBP9□□□□□ -0.97
CNIH4-207ENST00000469200 CCDC61Q9Y6R9 512 aa9□□□□□ -0.97
CNIH4-207ENST00000469200 PSEN1P49768 467 aa8.98□□□□□ -0.97
CNIH4-207ENST00000469200 CHADLQ6NUI6 762 aa8.98□□□□□ -0.97
CNIH4-207ENST00000469200 CHRDL2Q6WN34 429 aa8.98□□□□□ -0.97
CNIH4-207ENST00000469200 FXR2P51116 673 aaKnown RBP eCLIP8.96□□□□□ -0.98
CNIH4-207ENST00000469200 PRKAR2AP13861 404 aaKnown RBP8.95□□□□□ -0.98
CNIH4-207ENST00000469200 SOX12O15370 315 aa8.94□□□□□ -0.98
CNIH4-207ENST00000469200 PCDHB8Q9UN66 801 aa8.94□□□□□ -0.98
CNIH4-207ENST00000469200 PCDHB13Q9Y5F0 798 aa8.94□□□□□ -0.98
CNIH4-207ENST00000469200 NLRP6P59044 892 aa8.92□□□□□ -0.98
CNIH4-207ENST00000469200 MFRPQ9BY79 579 aa8.92□□□□□ -0.98
CNIH4-207ENST00000469200 TULP1O00294 542 aaPredicted RBP8.91□□□□□ -0.98
CNIH4-207ENST00000469200 ARHGEF1Q92888 912 aaKnown RBP8.89□□□□□ -0.99
CNIH4-207ENST00000469200 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
CNIH4-207ENST00000469200 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
CNIH4-207ENST00000469200 KIF12Q96FN5 646 aa8.88□□□□□ -0.99
CNIH4-207ENST00000469200 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
CNIH4-207ENST00000469200 IFNL1Q8IU54 200 aa8.87□□□□□ -0.99
CNIH4-207ENST00000469200 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
CNIH4-207ENST00000469200 MAP3K13O43283 966 aa8.84□□□□□ -0.99
CNIH4-207ENST00000469200 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.84□□□□□ -0.99
CNIH4-207ENST00000469200 E2F4Q16254 413 aa8.83□□□□□ -1
CNIH4-207ENST00000469200 EFCAB3Q8N7B9 438 aa8.83□□□□□ -1
CNIH4-207ENST00000469200 CABP2Q9NPB3 220 aa8.83□□□□□ -1
CNIH4-207ENST00000469200 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
CNIH4-207ENST00000469200 TMEM132AQ24JP5 1023 aa8.8□□□□□ -1
CNIH4-207ENST00000469200 SP7Q8TDD2 431 aaPredicted RBP8.8□□□□□ -1
CNIH4-207ENST00000469200 PDE4AP27815 886 aa8.79□□□□□ -1
CNIH4-207ENST00000469200 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
CNIH4-207ENST00000469200 PHF8Q9UPP1 1060 aa8.79□□□□□ -1
CNIH4-207ENST00000469200 PPP1R37O75864 691 aa8.78□□□□□ -1
CNIH4-207ENST00000469200 ARIH1Q9Y4X5 557 aaPredicted RBP8.77□□□□□ -1.01
CNIH4-207ENST00000469200 GOLGA2Q08379 1002 aa8.76□□□□□ -1.01
CNIH4-207ENST00000469200 ZRANB1Q9UGI0 708 aa8.76□□□□□ -1.01
CNIH4-207ENST00000469200 MFSD10Q14728 455 aa8.75□□□□□ -1.01
CNIH4-207ENST00000469200 SMYD5Q6GMV2 418 aa8.75□□□□□ -1.01
CNIH4-207ENST00000469200 TESPA1A2RU30 521 aaPredicted RBP8.74□□□□□ -1.01
CNIH4-207ENST00000469200 CD44P16070 742 aaKnown RBP8.74□□□□□ -1.01
CNIH4-207ENST00000469200 CRISPLD2Q9H0B8 497 aa8.72□□□□□ -1.01
CNIH4-207ENST00000469200 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
CNIH4-207ENST00000469200 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
CNIH4-207ENST00000469200 MKRN3Q13064 507 aaKnown RBP8.7□□□□□ -1.02
CNIH4-207ENST00000469200 DDX27Q96GQ7 796 aaKnown RBP8.7□□□□□ -1.02
CNIH4-207ENST00000469200 LARP6Q9BRS8 491 aaKnown RBP8.7□□□□□ -1.02
CNIH4-207ENST00000469200 MS4A4AQ96JQ5 239 aa8.69□□□□□ -1.02
CNIH4-207ENST00000469200 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
CNIH4-207ENST00000469200 CAMK2BQ13554 666 aa8.68□□□□□ -1.02
CNIH4-207ENST00000469200 TIE1P35590 1138 aa8.67□□□□□ -1.02
CNIH4-207ENST00000469200 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
CNIH4-207ENST00000469200 PHF12Q96QT6 1004 aa8.67□□□□□ -1.02
CNIH4-207ENST00000469200 HAX1O00165 279 aa8.66□□□□□ -1.02
CNIH4-207ENST00000469200 SEMA3EO15041 775 aa8.66□□□□□ -1.02
CNIH4-207ENST00000469200 CLCN6P51797 869 aa8.66□□□□□ -1.02
CNIH4-207ENST00000469200 ILDR1Q86SU0 546 aaPredicted RBP8.64□□□□□ -1.03
CNIH4-207ENST00000469200 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
CNIH4-207ENST00000469200 C19orf67A6NJJ6 358 aa8.62□□□□□ -1.03
CNIH4-207ENST00000469200 MS4A3Q96HJ5 214 aa8.62□□□□□ -1.03
CNIH4-207ENST00000469200 ZMYND10O75800 440 aa8.61□□□□□ -1.03
CNIH4-207ENST00000469200 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
CNIH4-207ENST00000469200 GPHNQ9NQX3 736 aaPredicted RBP8.6□□□□□ -1.03
CNIH4-207ENST00000469200 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
CNIH4-207ENST00000469200 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
CNIH4-207ENST00000469200 EVX2Q03828 476 aa8.58□□□□□ -1.04
CNIH4-207ENST00000469200 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms