RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 NUBP1P53384 320 aa15.68■□□□□ 0.1
ATG3-204ENST00000467275 CCDC61Q9Y6R9 512 aa15.68■□□□□ 0.1
ATG3-204ENST00000467275 DCBLD2Q96PD2 775 aa15.67■□□□□ 0.1
ATG3-204ENST00000467275 FAM212AQ96EL1 285 aa15.62■□□□□ 0.09
ATG3-204ENST00000467275 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
ATG3-204ENST00000467275 MS4A3Q96HJ5 214 aa15.58■□□□□ 0.08
ATG3-204ENST00000467275 KIF12Q96FN5 646 aa15.57■□□□□ 0.08
ATG3-204ENST00000467275 DCAF8Q5TAQ9 597 aa15.55■□□□□ 0.08
ATG3-204ENST00000467275 MAP3K13O43283 966 aa15.51■□□□□ 0.07
ATG3-204ENST00000467275 IFNLR1Q8IU57 520 aaPredicted RBP15.51■□□□□ 0.07
ATG3-204ENST00000467275 SPOCK2Q92563 424 aa15.44■□□□□ 0.06
ATG3-204ENST00000467275 PCDHB13Q9Y5F0 798 aa15.43■□□□□ 0.06
ATG3-204ENST00000467275 GSE1Q14687 1217 aa15.42■□□□□ 0.06
ATG3-204ENST00000467275 SGIP1Q9BQI5 828 aa15.41■□□□□ 0.06
ATG3-204ENST00000467275 PYGBP11216 843 aa15.39■□□□□ 0.05
ATG3-204ENST00000467275 ASTLQ6HA08 431 aaPredicted RBP15.37■□□□□ 0.05
ATG3-204ENST00000467275 ATMINO43313 823 aaPredicted RBP15.36■□□□□ 0.05
ATG3-204ENST00000467275 LHX8Q68G74 356 aa15.35■□□□□ 0.05
ATG3-204ENST00000467275 TRPC6Q9Y210 931 aa15.35■□□□□ 0.05
ATG3-204ENST00000467275 IFNL1Q8IU54 200 aa15.33■□□□□ 0.04
ATG3-204ENST00000467275 TIE1P35590 1138 aa15.32■□□□□ 0.04
ATG3-204ENST00000467275 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
ATG3-204ENST00000467275 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
ATG3-204ENST00000467275 BMP2KQ9NSY1 1161 aaPredicted RBP15.31■□□□□ 0.04
ATG3-204ENST00000467275 ATN1P54259 1190 aaPredicted RBP15.29■□□□□ 0.04
ATG3-204ENST00000467275 SLC39A7Q92504 469 aa15.25■□□□□ 0.03
ATG3-204ENST00000467275 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
ATG3-204ENST00000467275 C7P10643 843 aa15.22■□□□□ 0.03
ATG3-204ENST00000467275 METRNQ9UJH8 293 aa15.22■□□□□ 0.03
ATG3-204ENST00000467275 PCDHB8Q9UN66 801 aa15.22■□□□□ 0.03
ATG3-204ENST00000467275 CHRM1P11229 460 aaPredicted RBP15.21■□□□□ 0.03
ATG3-204ENST00000467275 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
ATG3-204ENST00000467275 ZNF467Q7Z7K2 595 aaPredicted RBP15.18■□□□□ 0.02
ATG3-204ENST00000467275 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
ATG3-204ENST00000467275 TRIM41Q8WV44 630 aa15.1■□□□□ 0.01
ATG3-204ENST00000467275 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
ATG3-204ENST00000467275 SEC24BO95487 1268 aa15.07■□□□□ 0
ATG3-204ENST00000467275 IER5LQ5T953 404 aa15.06■□□□□ 0
ATG3-204ENST00000467275 PSEN1P49768 467 aa15.02■□□□□ -0
ATG3-204ENST00000467275 POTEFA5A3E0 1075 aa15□□□□□ -0.01
ATG3-204ENST00000467275 PDAP1Q13442 181 aaKnown RBP15□□□□□ -0.01
ATG3-204ENST00000467275 COLQQ9Y215 455 aaPredicted RBP14.99□□□□□ -0.01
ATG3-204ENST00000467275 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
ATG3-204ENST00000467275 OTUD5Q96G74 571 aa14.97□□□□□ -0.01
ATG3-204ENST00000467275 PLCG2P16885 1265 aa14.94□□□□□ -0.02
ATG3-204ENST00000467275 MAMSTRQ6ZN01 415 aa14.94□□□□□ -0.02
ATG3-204ENST00000467275 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
ATG3-204ENST00000467275 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
ATG3-204ENST00000467275 IRX5P78411 483 aaPredicted RBP14.9□□□□□ -0.02
ATG3-204ENST00000467275 SCUBE2Q9NQ36 999 aa14.89□□□□□ -0.03
ATG3-204ENST00000467275 RIOK3O14730 519 aaKnown RBP14.88□□□□□ -0.03
ATG3-204ENST00000467275 OCEL1Q9H607 264 aa14.88□□□□□ -0.03
ATG3-204ENST00000467275 CABP2Q9NPB3 220 aa14.86□□□□□ -0.03
ATG3-204ENST00000467275 RNF25Q96BH1 459 aaPredicted RBP14.85□□□□□ -0.03
ATG3-204ENST00000467275 ECM2O94769 699 aaPredicted RBP14.84□□□□□ -0.03
ATG3-204ENST00000467275 VGFO15240 615 aaPredicted RBP14.8□□□□□ -0.04
ATG3-204ENST00000467275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.8□□□□□ -0.044e-11■■■■■ 34.8
ATG3-204ENST00000467275 PKD2Q13563 968 aa14.78□□□□□ -0.04
ATG3-204ENST00000467275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.76□□□□□ -0.05
ATG3-204ENST00000467275 ZFP91Q96JP5 570 aaPredicted RBP14.76□□□□□ -0.05
ATG3-204ENST00000467275 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
ATG3-204ENST00000467275 PDCD7Q8N8D1 485 aaKnown RBP14.74□□□□□ -0.05
ATG3-204ENST00000467275 EFCAB3Q8N7B9 438 aa14.71□□□□□ -0.05
ATG3-204ENST00000467275 L3MBTL3Q96JM7 780 aaPredicted RBP14.68□□□□□ -0.06
ATG3-204ENST00000467275 RGL2O15211 777 aa14.67□□□□□ -0.06
ATG3-204ENST00000467275 ILDR1Q86SU0 546 aaPredicted RBP14.66□□□□□ -0.06
ATG3-204ENST00000467275 SLAIN1Q8ND83 568 aa14.65□□□□□ -0.06
ATG3-204ENST00000467275 BCL11BQ9C0K0 894 aaPredicted RBP14.64□□□□□ -0.07
ATG3-204ENST00000467275 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.63□□□□□ -0.07
ATG3-204ENST00000467275 DPY19L2Q6NUT2 758 aa14.62□□□□□ -0.07
ATG3-204ENST00000467275 STK24Q9Y6E0 443 aa14.62□□□□□ -0.07
ATG3-204ENST00000467275 STK25O00506 426 aa14.61□□□□□ -0.07
ATG3-204ENST00000467275 G3V3G9 751 aa14.6□□□□□ -0.07
ATG3-204ENST00000467275 SOX12O15370 315 aa14.6□□□□□ -0.07
ATG3-204ENST00000467275 C3orf67Q6ZVT6 689 aa14.6□□□□□ -0.07
ATG3-204ENST00000467275 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
ATG3-204ENST00000467275 BOLA1Q9Y3E2 137 aa14.55□□□□□ -0.08
ATG3-204ENST00000467275 PHF8Q9UPP1 1060 aa14.53□□□□□ -0.08
ATG3-204ENST00000467275 NLRP6P59044 892 aa14.48□□□□□ -0.09
ATG3-204ENST00000467275 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
ATG3-204ENST00000467275 POTEMA6NI47 508 aa14.42□□□□□ -0.1
ATG3-204ENST00000467275 SNPHO15079 494 aa14.42□□□□□ -0.1
ATG3-204ENST00000467275 TMEM121BQ9BXQ6 578 aaPredicted RBP14.42□□□□□ -0.1
ATG3-204ENST00000467275 LCE2DQ5TA82 110 aaPredicted RBP14.41□□□□□ -0.1
ATG3-204ENST00000467275 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
ATG3-204ENST00000467275 MFRPQ9BY79 579 aa14.41□□□□□ -0.1
ATG3-204ENST00000467275 MICALL2Q8IY33 904 aa14.4□□□□□ -0.1
ATG3-204ENST00000467275 FBXO22Q8NEZ5 403 aa14.4□□□□□ -0.1
ATG3-204ENST00000467275 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
ATG3-204ENST00000467275 HS6ST3Q8IZP7 471 aa14.36□□□□□ -0.11
ATG3-204ENST00000467275 ST18O60284 1047 aa14.34□□□□□ -0.11
ATG3-204ENST00000467275 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
ATG3-204ENST00000467275 TMEM92Q6UXU6 159 aa14.24□□□□□ -0.13
ATG3-204ENST00000467275 PPP1R37O75864 691 aa14.19□□□□□ -0.14
ATG3-204ENST00000467275 DOK7Q18PE1 504 aa14.18□□□□□ -0.14
ATG3-204ENST00000467275 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
ATG3-204ENST00000467275 HOXB3P14651 431 aaPredicted RBP14.17□□□□□ -0.14
ATG3-204ENST00000467275 MARVELD3Q96A59 401 aa14.17□□□□□ -0.14
ATG3-204ENST00000467275 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
ATG3-204ENST00000467275 PCDH10Q9P2E7 1040 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms