RNA–Protein interactions for RNA: ENST00000464989.5

SPEG-216, Transcript of SPEG complex locus, humanhuman

TSL 2

Gene SPEG, Length 5,132 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-216ENST00000464989 WDR43Q15061 677 aaKnown RBP eCLIP24.26■■□□□ 1.47
SPEG-216ENST00000464989 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
SPEG-216ENST00000464989 CCDC136Q96JN2 1154 aa24.25■■□□□ 1.47
SPEG-216ENST00000464989 ARID4BQ4LE39 1312 aaPredicted RBP24.25■■□□□ 1.47
SPEG-216ENST00000464989 KDM2AQ9Y2K7 1162 aa24.24■■□□□ 1.47
SPEG-216ENST00000464989 MRS2Q9HD23 443 aa24.23■■□□□ 1.47
SPEG-216ENST00000464989 EIF4G2P78344 907 aaKnown RBP eCLIP24.22■■□□□ 1.47
SPEG-216ENST00000464989 A0A0G2JS52 829 aa24.21■■□□□ 1.47
SPEG-216ENST00000464989 HSP90AA1P07900 732 aaKnown RBP24.21■■□□□ 1.47
SPEG-216ENST00000464989 ANP32BQ92688 251 aaKnown RBP24.18■■□□□ 1.46
SPEG-216ENST00000464989 ERCC6Q03468 1493 aa24.17■■□□□ 1.46
SPEG-216ENST00000464989 KIF27Q86VH2 1401 aa24.14■■□□□ 1.46
SPEG-216ENST00000464989 HAP1P54257 671 aaPredicted RBP24.14■■□□□ 1.45
SPEG-216ENST00000464989 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
SPEG-216ENST00000464989 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
SPEG-216ENST00000464989 ZBTB7CA1YPR0 619 aa24.08■■□□□ 1.45
SPEG-216ENST00000464989 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
SPEG-216ENST00000464989 MYH16Q9H6N6 1097 aa24.06■■□□□ 1.44
SPEG-216ENST00000464989 CDCA8Q53HL2 280 aa24.04■■□□□ 1.44
SPEG-216ENST00000464989 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
SPEG-216ENST00000464989 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
SPEG-216ENST00000464989 CFAP53Q96M91 514 aa23.98■■□□□ 1.43
SPEG-216ENST00000464989 PLEKHG5O94827 1062 aa23.95■■□□□ 1.42
SPEG-216ENST00000464989 TIMELESSQ9UNS1 1208 aa23.95■■□□□ 1.42
SPEG-216ENST00000464989 DDRGK1Q96HY6 314 aa23.92■■□□□ 1.42
SPEG-216ENST00000464989 RGL3Q3MIN7 710 aa23.9■■□□□ 1.42
SPEG-216ENST00000464989 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
SPEG-216ENST00000464989 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
SPEG-216ENST00000464989 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
SPEG-216ENST00000464989 HIRIP3Q9BW71 556 aaPredicted RBP23.86■■□□□ 1.41
SPEG-216ENST00000464989 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
SPEG-216ENST00000464989 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
SPEG-216ENST00000464989 POGKQ9P215 609 aa23.83■■□□□ 1.41
SPEG-216ENST00000464989 NBR1Q14596 966 aa23.81■■□□□ 1.4
SPEG-216ENST00000464989 KNSTRNQ9Y448 316 aa23.81■■□□□ 1.4
SPEG-216ENST00000464989 ANP32EQ9BTT0 268 aa23.8■■□□□ 1.4
SPEG-216ENST00000464989 BECN1Q14457 450 aa23.8■■□□□ 1.4
SPEG-216ENST00000464989 IRX6P78412 446 aaPredicted RBP23.79■■□□□ 1.4
SPEG-216ENST00000464989 GLIPR1L2Q4G1C9 344 aa23.79■■□□□ 1.4
SPEG-216ENST00000464989 EIF5BO60841 1220 aaKnown RBP23.78■■□□□ 1.4
SPEG-216ENST00000464989 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
SPEG-216ENST00000464989 KANK1Q14678 1352 aa23.76■■□□□ 1.39
SPEG-216ENST00000464989 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
SPEG-216ENST00000464989 CDK11BP21127 795 aaKnown RBP23.75■■□□□ 1.39
SPEG-216ENST00000464989 ARXQ96QS3 562 aa23.74■■□□□ 1.39
SPEG-216ENST00000464989 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
SPEG-216ENST00000464989 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
SPEG-216ENST00000464989 PPP4R2Q9NY27 417 aa23.73■■□□□ 1.39
SPEG-216ENST00000464989 CARD11Q9BXL7 1154 aa23.72■■□□□ 1.39
SPEG-216ENST00000464989 PPM1GO15355 546 aaPredicted RBP23.71■■□□□ 1.39
SPEG-216ENST00000464989 MAPK8IP3Q9UPT6 1336 aa23.69■■□□□ 1.38
SPEG-216ENST00000464989 CCER2I3L3R5 266 aa23.69■■□□□ 1.38
SPEG-216ENST00000464989 SUPT16HQ9Y5B9 1047 aaKnown RBP23.68■■□□□ 1.38
SPEG-216ENST00000464989 SOGA1O94964 1423 aa23.65■■□□□ 1.38
SPEG-216ENST00000464989 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
SPEG-216ENST00000464989 NPHP1O15259 732 aa23.63■■□□□ 1.37
SPEG-216ENST00000464989 SIN3AQ96ST3 1273 aa23.62■■□□□ 1.37
SPEG-216ENST00000464989 SETD5Q9C0A6 1442 aa23.61■■□□□ 1.37
SPEG-216ENST00000464989 PNNQ9H307 717 aaKnown RBP23.6■■□□□ 1.37
SPEG-216ENST00000464989 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
SPEG-216ENST00000464989 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.37
SPEG-216ENST00000464989 MLECQ14165 292 aa23.58■■□□□ 1.37
SPEG-216ENST00000464989 GOLGA6L22H0YM25 854 aa23.57■■□□□ 1.36
SPEG-216ENST00000464989 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
SPEG-216ENST00000464989 CUX2O14529 1486 aa23.56■■□□□ 1.36
SPEG-216ENST00000464989 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
SPEG-216ENST00000464989 CASC1Q6TDU7 716 aa23.54■■□□□ 1.36
SPEG-216ENST00000464989 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
SPEG-216ENST00000464989 NCLP19338 710 aaKnown RBP23.54■■□□□ 1.36
SPEG-216ENST00000464989 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
SPEG-216ENST00000464989 ARHGAP35Q9NRY4 1499 aa23.53■■□□□ 1.36
SPEG-216ENST00000464989 FTSJ3Q8IY81 847 aaKnown RBP23.53■■□□□ 1.36
SPEG-216ENST00000464989 ERICH6BQ5W0A0 696 aa23.53■■□□□ 1.36
SPEG-216ENST00000464989 MS4A1P11836 297 aa23.5■■□□□ 1.35
SPEG-216ENST00000464989 SMARCA2P51531 1590 aa23.49■■□□□ 1.35
SPEG-216ENST00000464989 TMF1P82094 1093 aa23.47■■□□□ 1.35
SPEG-216ENST00000464989 LAS1LQ9Y4W2 734 aaKnown RBP23.47■■□□□ 1.35
SPEG-216ENST00000464989 TRIM44Q96DX7 344 aaPredicted RBP23.45■■□□□ 1.34
SPEG-216ENST00000464989 GGT6Q6P531 493 aa23.43■■□□□ 1.34
SPEG-216ENST00000464989 NOP58Q9Y2X3 529 aaKnown RBP23.43■■□□□ 1.34
SPEG-216ENST00000464989 NEUROD2Q15784 382 aa23.42■■□□□ 1.34
SPEG-216ENST00000464989 EFCAB2Q5VUJ9 269 aa23.42■■□□□ 1.34
SPEG-216ENST00000464989 SRPK2P78362 688 aaKnown RBP23.42■■□□□ 1.34
SPEG-216ENST00000464989 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
SPEG-216ENST00000464989 FMN1Q68DA7 1419 aa23.41■■□□□ 1.34
SPEG-216ENST00000464989 U2SURPO15042 1029 aaKnown RBP23.41■■□□□ 1.34
SPEG-216ENST00000464989 ZRSR1Q15695 479 aaKnown RBP23.41■■□□□ 1.34
SPEG-216ENST00000464989 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
SPEG-216ENST00000464989 DCAF11Q8TEB1 546 aa23.38■■□□□ 1.33
SPEG-216ENST00000464989 GOLGA2Q08379 1002 aa23.37■■□□□ 1.33
SPEG-216ENST00000464989 OS9Q13438 667 aaPredicted RBP23.36■■□□□ 1.33
SPEG-216ENST00000464989 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
SPEG-216ENST00000464989 RAB3GAP2Q9H2M9 1393 aa23.33■■□□□ 1.33
SPEG-216ENST00000464989 HSPA5P11021 654 aaKnown RBP23.33■■□□□ 1.32
SPEG-216ENST00000464989 HDGFL2Q7Z4V5 671 aaPredicted RBP23.32■■□□□ 1.32
SPEG-216ENST00000464989 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
SPEG-216ENST00000464989 B4GALNT3Q6L9W6 998 aa23.28■■□□□ 1.32
SPEG-216ENST00000464989 MORC1Q86VD1 984 aa23.28■■□□□ 1.32
SPEG-216ENST00000464989 RTF1Q92541 710 aaKnown RBP23.27■■□□□ 1.32
SPEG-216ENST00000464989 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms