RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
TM9SF3-203ENST00000464654 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
TM9SF3-203ENST00000464654 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
TM9SF3-203ENST00000464654 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
TM9SF3-203ENST00000464654 FAM212AQ96EL1 285 aa11.29□□□□□ -0.6
TM9SF3-203ENST00000464654 POTEMA6NI47 508 aa11.26□□□□□ -0.61
TM9SF3-203ENST00000464654 SPOCK2Q92563 424 aa11.25□□□□□ -0.61
TM9SF3-203ENST00000464654 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
TM9SF3-203ENST00000464654 DCBLD2Q96PD2 775 aa11.23□□□□□ -0.61
TM9SF3-203ENST00000464654 GSE1Q14687 1217 aa11.21□□□□□ -0.61
TM9SF3-203ENST00000464654 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
TM9SF3-203ENST00000464654 KIF12Q96FN5 646 aa11.2□□□□□ -0.62
TM9SF3-203ENST00000464654 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
TM9SF3-203ENST00000464654 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
TM9SF3-203ENST00000464654 GALR2O43603 387 aaPredicted RBP11.17□□□□□ -0.62
TM9SF3-203ENST00000464654 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
TM9SF3-203ENST00000464654 MAP3K13O43283 966 aa11.13□□□□□ -0.63
TM9SF3-203ENST00000464654 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
TM9SF3-203ENST00000464654 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
TM9SF3-203ENST00000464654 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
TM9SF3-203ENST00000464654 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
TM9SF3-203ENST00000464654 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
TM9SF3-203ENST00000464654 PYGBP11216 843 aa11.06□□□□□ -0.64
TM9SF3-203ENST00000464654 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
TM9SF3-203ENST00000464654 ASTLQ6HA08 431 aaPredicted RBP11.04□□□□□ -0.64
TM9SF3-203ENST00000464654 TIE1P35590 1138 aa11.03□□□□□ -0.64
TM9SF3-203ENST00000464654 IFNL1Q8IU54 200 aa11.02□□□□□ -0.65
TM9SF3-203ENST00000464654 ZNF467Q7Z7K2 595 aaPredicted RBP11□□□□□ -0.65
TM9SF3-203ENST00000464654 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
TM9SF3-203ENST00000464654 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
TM9SF3-203ENST00000464654 BMP2KQ9NSY1 1161 aaPredicted RBP10.97□□□□□ -0.65
TM9SF3-203ENST00000464654 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
TM9SF3-203ENST00000464654 TTLL13PA6NNM8 815 aa10.94□□□□□ -0.66
TM9SF3-203ENST00000464654 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
TM9SF3-203ENST00000464654 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
TM9SF3-203ENST00000464654 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
TM9SF3-203ENST00000464654 SLC39A7Q92504 469 aa10.91□□□□□ -0.66
TM9SF3-203ENST00000464654 C7P10643 843 aa10.9□□□□□ -0.66
TM9SF3-203ENST00000464654 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
TM9SF3-203ENST00000464654 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
TM9SF3-203ENST00000464654 PKD2Q13563 968 aa10.86□□□□□ -0.67
TM9SF3-203ENST00000464654 IER5LQ5T953 404 aa10.86□□□□□ -0.67
TM9SF3-203ENST00000464654 METRNQ9UJH8 293 aa10.85□□□□□ -0.67
TM9SF3-203ENST00000464654 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
TM9SF3-203ENST00000464654 PSEN1P49768 467 aa10.84□□□□□ -0.67
TM9SF3-203ENST00000464654 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
TM9SF3-203ENST00000464654 ECM2O94769 699 aaPredicted RBP10.81□□□□□ -0.68
TM9SF3-203ENST00000464654 RNF25Q96BH1 459 aaPredicted RBP10.81□□□□□ -0.68
TM9SF3-203ENST00000464654 FAM163AQ96GL9 167 aaPredicted RBP10.8□□□□□ -0.68
TM9SF3-203ENST00000464654 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
TM9SF3-203ENST00000464654 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
TM9SF3-203ENST00000464654 SEC24BO95487 1268 aa10.74□□□□□ -0.69
TM9SF3-203ENST00000464654 GOLGA2Q08379 1002 aa10.74□□□□□ -0.69
TM9SF3-203ENST00000464654 LCE2DQ5TA82 110 aaPredicted RBP10.74□□□□□ -0.69
TM9SF3-203ENST00000464654 POTEFA5A3E0 1075 aa10.73□□□□□ -0.69
TM9SF3-203ENST00000464654 IRX5P78411 483 aaPredicted RBP10.73□□□□□ -0.69
TM9SF3-203ENST00000464654 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
TM9SF3-203ENST00000464654 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
TM9SF3-203ENST00000464654 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
TM9SF3-203ENST00000464654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
TM9SF3-203ENST00000464654 RGL2O15211 777 aa10.7□□□□□ -0.7
TM9SF3-203ENST00000464654 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
TM9SF3-203ENST00000464654 OCEL1Q9H607 264 aa10.7□□□□□ -0.7
TM9SF3-203ENST00000464654 PLCG2P16885 1265 aa10.69□□□□□ -0.7
TM9SF3-203ENST00000464654 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
TM9SF3-203ENST00000464654 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
TM9SF3-203ENST00000464654 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
TM9SF3-203ENST00000464654 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
TM9SF3-203ENST00000464654 PDCD7Q8N8D1 485 aaKnown RBP10.63□□□□□ -0.71
TM9SF3-203ENST00000464654 SCUBE2Q9NQ36 999 aa10.63□□□□□ -0.71
TM9SF3-203ENST00000464654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.719e-7■□□□□ 11.2
TM9SF3-203ENST00000464654 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
TM9SF3-203ENST00000464654 SOX12O15370 315 aa10.61□□□□□ -0.71
TM9SF3-203ENST00000464654 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
TM9SF3-203ENST00000464654 STK25O00506 426 aa10.6□□□□□ -0.71
TM9SF3-203ENST00000464654 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
TM9SF3-203ENST00000464654 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
TM9SF3-203ENST00000464654 L3MBTL3Q96JM7 780 aaPredicted RBP10.56□□□□□ -0.72
TM9SF3-203ENST00000464654 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
TM9SF3-203ENST00000464654 NLRP6P59044 892 aa10.51□□□□□ -0.73
TM9SF3-203ENST00000464654 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
TM9SF3-203ENST00000464654 PHF8Q9UPP1 1060 aa10.49□□□□□ -0.73
TM9SF3-203ENST00000464654 DPY19L2Q6NUT2 758 aa10.48□□□□□ -0.73
TM9SF3-203ENST00000464654 FBXO22Q8NEZ5 403 aa10.48□□□□□ -0.73
TM9SF3-203ENST00000464654 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
TM9SF3-203ENST00000464654 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
TM9SF3-203ENST00000464654 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
TM9SF3-203ENST00000464654 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
TM9SF3-203ENST00000464654 TMEM121BQ9BXQ6 578 aaPredicted RBP10.46□□□□□ -0.73
TM9SF3-203ENST00000464654 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.46□□□□□ -0.73
TM9SF3-203ENST00000464654 G3V3G9 751 aa10.45□□□□□ -0.74
TM9SF3-203ENST00000464654 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
TM9SF3-203ENST00000464654 C3orf67Q6ZVT6 689 aa10.44□□□□□ -0.74
TM9SF3-203ENST00000464654 MMRN1Q13201 1228 aa10.43□□□□□ -0.74
TM9SF3-203ENST00000464654 SLAIN1Q8ND83 568 aa10.41□□□□□ -0.74
TM9SF3-203ENST00000464654 MICALL2Q8IY33 904 aa10.39□□□□□ -0.75
TM9SF3-203ENST00000464654 RYDENQ9NUL5 291 aaKnown RBP10.39□□□□□ -0.75
TM9SF3-203ENST00000464654 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
TM9SF3-203ENST00000464654 SPNS2Q8IVW8 549 aa10.36□□□□□ -0.75
TM9SF3-203ENST00000464654 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms