RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
VRK2-208ENST00000463222 PKD2Q13563 968 aa10.65□□□□□ -0.7
VRK2-208ENST00000463222 PHF12Q96QT6 1004 aa10.65□□□□□ -0.7
VRK2-208ENST00000463222 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
VRK2-208ENST00000463222 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
VRK2-208ENST00000463222 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
VRK2-208ENST00000463222 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
VRK2-208ENST00000463222 MS4A3Q96HJ5 214 aa10.52□□□□□ -0.73
VRK2-208ENST00000463222 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
VRK2-208ENST00000463222 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
VRK2-208ENST00000463222 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
VRK2-208ENST00000463222 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
VRK2-208ENST00000463222 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
VRK2-208ENST00000463222 POTEB2H3BUK9 544 aa10.47□□□□□ -0.73
VRK2-208ENST00000463222 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
VRK2-208ENST00000463222 ATMINO43313 823 aaPredicted RBP10.46□□□□□ -0.73
VRK2-208ENST00000463222 MIER1Q8N108 512 aa10.46□□□□□ -0.73
VRK2-208ENST00000463222 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
VRK2-208ENST00000463222 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
VRK2-208ENST00000463222 C7P10643 843 aa10.44□□□□□ -0.74
VRK2-208ENST00000463222 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
VRK2-208ENST00000463222 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
VRK2-208ENST00000463222 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
VRK2-208ENST00000463222 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.39□□□□□ -0.75
VRK2-208ENST00000463222 RGL2O15211 777 aa10.38□□□□□ -0.75
VRK2-208ENST00000463222 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
VRK2-208ENST00000463222 PAXIP1Q6ZW49 1069 aaPredicted RBP10.37□□□□□ -0.75
VRK2-208ENST00000463222 VSIG10Q8N0Z9 540 aa10.37□□□□□ -0.75
VRK2-208ENST00000463222 CFAP44Q96MT7 982 aa10.36□□□□□ -0.75
VRK2-208ENST00000463222 ATN1P54259 1190 aaPredicted RBP10.35□□□□□ -0.75
VRK2-208ENST00000463222 ZBTB47Q9UFB7 747 aaPredicted RBP10.35□□□□□ -0.75
VRK2-208ENST00000463222 TIE1P35590 1138 aa10.34□□□□□ -0.75
VRK2-208ENST00000463222 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
VRK2-208ENST00000463222 BMP2KQ9NSY1 1161 aaPredicted RBP10.34□□□□□ -0.75
VRK2-208ENST00000463222 CIZ1Q9ULV3 898 aaPredicted RBP10.34□□□□□ -0.75
VRK2-208ENST00000463222 MAP3K13O43283 966 aa10.33□□□□□ -0.76
VRK2-208ENST00000463222 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
VRK2-208ENST00000463222 BCANQ96GW7 911 aa10.31□□□□□ -0.76
VRK2-208ENST00000463222 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
VRK2-208ENST00000463222 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
VRK2-208ENST00000463222 TRPC6Q9Y210 931 aa10.29□□□□□ -0.76
VRK2-208ENST00000463222 NUBP1P53384 320 aa10.27□□□□□ -0.77
VRK2-208ENST00000463222 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
VRK2-208ENST00000463222 SCUBE2Q9NQ36 999 aa10.26□□□□□ -0.77
VRK2-208ENST00000463222 POTEFA5A3E0 1075 aa10.25□□□□□ -0.77
VRK2-208ENST00000463222 POTEMA6NI47 508 aa10.25□□□□□ -0.77
VRK2-208ENST00000463222 CHGAP10645 457 aaKnown RBP10.25□□□□□ -0.77
VRK2-208ENST00000463222 TTLL13PA6NNM8 815 aa10.24□□□□□ -0.77
VRK2-208ENST00000463222 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
VRK2-208ENST00000463222 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
VRK2-208ENST00000463222 IER5LQ5T953 404 aa10.22□□□□□ -0.77
VRK2-208ENST00000463222 POTEGQ6S5H5 508 aa10.22□□□□□ -0.77
VRK2-208ENST00000463222 FAM212AQ96EL1 285 aa10.22□□□□□ -0.77
VRK2-208ENST00000463222 TSHZ2Q9NRE2 1034 aa10.22□□□□□ -0.77
VRK2-208ENST00000463222 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
VRK2-208ENST00000463222 TAOK2Q9UL54 1235 aa10.19□□□□□ -0.78
VRK2-208ENST00000463222 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
VRK2-208ENST00000463222 TRIM35Q9UPQ4 493 aa10.17□□□□□ -0.78
VRK2-208ENST00000463222 SEC24BO95487 1268 aa10.16□□□□□ -0.78
VRK2-208ENST00000463222 IFNL1Q8IU54 200 aa10.16□□□□□ -0.78
VRK2-208ENST00000463222 COLQQ9Y215 455 aaPredicted RBP10.16□□□□□ -0.78
VRK2-208ENST00000463222 LCE2DQ5TA82 110 aaPredicted RBP10.15□□□□□ -0.78
VRK2-208ENST00000463222 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
VRK2-208ENST00000463222 GSE1Q14687 1217 aa10.11□□□□□ -0.79
VRK2-208ENST00000463222 DCAF8Q5TAQ9 597 aa10.1□□□□□ -0.79
VRK2-208ENST00000463222 RNF25Q96BH1 459 aaPredicted RBP10.1□□□□□ -0.79
VRK2-208ENST00000463222 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
VRK2-208ENST00000463222 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
VRK2-208ENST00000463222 HS6ST3Q8IZP7 471 aa10.08□□□□□ -0.8
VRK2-208ENST00000463222 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
VRK2-208ENST00000463222 PLCG2P16885 1265 aa10.04□□□□□ -0.8
VRK2-208ENST00000463222 IRX5P78411 483 aaPredicted RBP10.04□□□□□ -0.8
VRK2-208ENST00000463222 PYGBP11216 843 aa10.02□□□□□ -0.81
VRK2-208ENST00000463222 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
VRK2-208ENST00000463222 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
VRK2-208ENST00000463222 OCEL1Q9H607 264 aa9.98□□□□□ -0.81
VRK2-208ENST00000463222 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
VRK2-208ENST00000463222 DNAJC5Q9H3Z4 198 aa9.97□□□□□ -0.81
VRK2-208ENST00000463222 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.82
VRK2-208ENST00000463222 STK25O00506 426 aa9.95□□□□□ -0.82
VRK2-208ENST00000463222 ZNF467Q7Z7K2 595 aaPredicted RBP9.95□□□□□ -0.82
VRK2-208ENST00000463222 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
VRK2-208ENST00000463222 CHRM1P11229 460 aaPredicted RBP9.94□□□□□ -0.82
VRK2-208ENST00000463222 VGFO15240 615 aaPredicted RBP9.92□□□□□ -0.82
VRK2-208ENST00000463222 NBR1Q14596 966 aa9.91□□□□□ -0.82
VRK2-208ENST00000463222 ST18O60284 1047 aa9.9□□□□□ -0.82
VRK2-208ENST00000463222 STK24Q9Y6E0 443 aa9.89□□□□□ -0.83
VRK2-208ENST00000463222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.88□□□□□ -0.83
VRK2-208ENST00000463222 PDCD7Q8N8D1 485 aaKnown RBP9.88□□□□□ -0.83
VRK2-208ENST00000463222 ZFP91Q96JP5 570 aaPredicted RBP9.88□□□□□ -0.83
VRK2-208ENST00000463222 CDAN1Q8IWY9 1227 aa9.87□□□□□ -0.83
VRK2-208ENST00000463222 TMEM121BQ9BXQ6 578 aaPredicted RBP9.87□□□□□ -0.83
VRK2-208ENST00000463222 BCL11BQ9C0K0 894 aaPredicted RBP9.87□□□□□ -0.83
VRK2-208ENST00000463222 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
VRK2-208ENST00000463222 SNPHO15079 494 aa9.85□□□□□ -0.83
VRK2-208ENST00000463222 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
VRK2-208ENST00000463222 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
VRK2-208ENST00000463222 PSEN1P49768 467 aa9.82□□□□□ -0.84
VRK2-208ENST00000463222 ILDR1Q86SU0 546 aaPredicted RBP9.82□□□□□ -0.84
VRK2-208ENST00000463222 L3MBTL3Q96JM7 780 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms