RNA–Protein interactions for RNA: ENST00000462080.1

GPCPD1-203, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-203ENST00000462080 CCDC61Q9Y6R9 512 aa17.65■□□□□ 0.42
GPCPD1-203ENST00000462080 MS4A3Q96HJ5 214 aa17.57■□□□□ 0.4
GPCPD1-203ENST00000462080 NUBP1P53384 320 aa17.56■□□□□ 0.4
GPCPD1-203ENST00000462080 VASPP50552 380 aaPredicted RBP17.53■□□□□ 0.4
GPCPD1-203ENST00000462080 KIF12Q96FN5 646 aa17.51■□□□□ 0.39
GPCPD1-203ENST00000462080 LHX8Q68G74 356 aa17.48■□□□□ 0.39
GPCPD1-203ENST00000462080 FAM212AQ96EL1 285 aa17.45■□□□□ 0.38
GPCPD1-203ENST00000462080 MAP3K13O43283 966 aa17.43■□□□□ 0.38
GPCPD1-203ENST00000462080 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
GPCPD1-203ENST00000462080 ASTLQ6HA08 431 aaPredicted RBP17.38■□□□□ 0.37
GPCPD1-203ENST00000462080 ATMINO43313 823 aaPredicted RBP17.35■□□□□ 0.37
GPCPD1-203ENST00000462080 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
GPCPD1-203ENST00000462080 DCAF8Q5TAQ9 597 aa17.32■□□□□ 0.36
GPCPD1-203ENST00000462080 SGIP1Q9BQI5 828 aa17.31■□□□□ 0.36
GPCPD1-203ENST00000462080 TRPC6Q9Y210 931 aa17.3■□□□□ 0.36
GPCPD1-203ENST00000462080 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
GPCPD1-203ENST00000462080 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
GPCPD1-203ENST00000462080 TIE1P35590 1138 aa17.25■□□□□ 0.35
GPCPD1-203ENST00000462080 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
GPCPD1-203ENST00000462080 IFNLR1Q8IU57 520 aaPredicted RBP17.23■□□□□ 0.35
GPCPD1-203ENST00000462080 SLC39A7Q92504 469 aa17.23■□□□□ 0.35
GPCPD1-203ENST00000462080 METRNQ9UJH8 293 aa17.22■□□□□ 0.35
GPCPD1-203ENST00000462080 IFNL1Q8IU54 200 aa17.21■□□□□ 0.35
GPCPD1-203ENST00000462080 C7P10643 843 aa17.2■□□□□ 0.34
GPCPD1-203ENST00000462080 PYGBP11216 843 aa17.19■□□□□ 0.34
GPCPD1-203ENST00000462080 GSE1Q14687 1217 aa17.19■□□□□ 0.34
GPCPD1-203ENST00000462080 TTLL13PA6NNM8 815 aa17.16■□□□□ 0.34
GPCPD1-203ENST00000462080 SPOCK2Q92563 424 aa17.15■□□□□ 0.34
GPCPD1-203ENST00000462080 POTEB2H3BUK9 544 aa17.14■□□□□ 0.33
GPCPD1-203ENST00000462080 TRIM35Q9UPQ4 493 aa17.06■□□□□ 0.32
GPCPD1-203ENST00000462080 TMEM106CQ9BVX2 250 aa17.05■□□□□ 0.32
GPCPD1-203ENST00000462080 PCDHB8Q9UN66 801 aa17.03■□□□□ 0.32
GPCPD1-203ENST00000462080 OTUD5Q96G74 571 aa17.02■□□□□ 0.32
GPCPD1-203ENST00000462080 CHRM1P11229 460 aaPredicted RBP17■□□□□ 0.31
GPCPD1-203ENST00000462080 CIZ1Q9ULV3 898 aaPredicted RBP17■□□□□ 0.31
GPCPD1-203ENST00000462080 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
GPCPD1-203ENST00000462080 ZNF467Q7Z7K2 595 aaPredicted RBP16.98■□□□□ 0.31
GPCPD1-203ENST00000462080 IER5LQ5T953 404 aa16.97■□□□□ 0.31
GPCPD1-203ENST00000462080 SEC24BO95487 1268 aa16.94■□□□□ 0.3
GPCPD1-203ENST00000462080 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
GPCPD1-203ENST00000462080 COLQQ9Y215 455 aaPredicted RBP16.93■□□□□ 0.3
GPCPD1-203ENST00000462080 MAMSTRQ6ZN01 415 aa16.89■□□□□ 0.29
GPCPD1-203ENST00000462080 SCUBE2Q9NQ36 999 aa16.82■□□□□ 0.28
GPCPD1-203ENST00000462080 PSEN1P49768 467 aa16.81■□□□□ 0.28
GPCPD1-203ENST00000462080 PLCG2P16885 1265 aa16.8■□□□□ 0.28
GPCPD1-203ENST00000462080 IRX5P78411 483 aaPredicted RBP16.8■□□□□ 0.28
GPCPD1-203ENST00000462080 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
GPCPD1-203ENST00000462080 PDAP1Q13442 181 aaKnown RBP16.77■□□□□ 0.28
GPCPD1-203ENST00000462080 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
GPCPD1-203ENST00000462080 OCEL1Q9H607 264 aa16.73■□□□□ 0.27
GPCPD1-203ENST00000462080 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
GPCPD1-203ENST00000462080 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
GPCPD1-203ENST00000462080 PDCD7Q8N8D1 485 aaKnown RBP16.6■□□□□ 0.25
GPCPD1-203ENST00000462080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
GPCPD1-203ENST00000462080 RNF25Q96BH1 459 aaPredicted RBP16.57■□□□□ 0.24
GPCPD1-203ENST00000462080 RIOK3O14730 519 aaKnown RBP16.56■□□□□ 0.24
GPCPD1-203ENST00000462080 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
GPCPD1-203ENST00000462080 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
GPCPD1-203ENST00000462080 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
GPCPD1-203ENST00000462080 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
GPCPD1-203ENST00000462080 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.23
GPCPD1-203ENST00000462080 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
GPCPD1-203ENST00000462080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.45■□□□□ 0.22
GPCPD1-203ENST00000462080 ZFP91Q96JP5 570 aaPredicted RBP16.45■□□□□ 0.22
GPCPD1-203ENST00000462080 POTEMA6NI47 508 aa16.44■□□□□ 0.22
GPCPD1-203ENST00000462080 LCE2DQ5TA82 110 aaPredicted RBP16.43■□□□□ 0.22
GPCPD1-203ENST00000462080 EFCAB3Q8N7B9 438 aa16.43■□□□□ 0.22
GPCPD1-203ENST00000462080 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
GPCPD1-203ENST00000462080 C3orf67Q6ZVT6 689 aa16.41■□□□□ 0.22
GPCPD1-203ENST00000462080 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
GPCPD1-203ENST00000462080 DPY19L2Q6NUT2 758 aa16.4■□□□□ 0.22
GPCPD1-203ENST00000462080 PKD2Q13563 968 aa16.38■□□□□ 0.21
GPCPD1-203ENST00000462080 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
GPCPD1-203ENST00000462080 G3V3G9 751 aa16.32■□□□□ 0.2
GPCPD1-203ENST00000462080 BOLA1Q9Y3E2 137 aa16.32■□□□□ 0.2
GPCPD1-203ENST00000462080 SOX12O15370 315 aa16.3■□□□□ 0.2
GPCPD1-203ENST00000462080 BCL11BQ9C0K0 894 aaPredicted RBP16.29■□□□□ 0.2
GPCPD1-203ENST00000462080 RGL2O15211 777 aa16.27■□□□□ 0.2
GPCPD1-203ENST00000462080 SNPHO15079 494 aa16.25■□□□□ 0.19
GPCPD1-203ENST00000462080 STK24Q9Y6E0 443 aa16.25■□□□□ 0.19
GPCPD1-203ENST00000462080 ST18O60284 1047 aa16.24■□□□□ 0.19
GPCPD1-203ENST00000462080 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
GPCPD1-203ENST00000462080 STK25O00506 426 aa16.22■□□□□ 0.19
GPCPD1-203ENST00000462080 TMEM121BQ9BXQ6 578 aaPredicted RBP16.21■□□□□ 0.19
GPCPD1-203ENST00000462080 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
GPCPD1-203ENST00000462080 PCDH10Q9P2E7 1040 aa16.17■□□□□ 0.18
GPCPD1-203ENST00000462080 NLRP6P59044 892 aa16.14■□□□□ 0.17
GPCPD1-203ENST00000462080 MICALL2Q8IY33 904 aa16.14■□□□□ 0.17
GPCPD1-203ENST00000462080 FBXO22Q8NEZ5 403 aa16.11■□□□□ 0.17
GPCPD1-203ENST00000462080 MFRPQ9BY79 579 aa16.09■□□□□ 0.17
GPCPD1-203ENST00000462080 PLSCR2Q9NRY7 297 aa16.09■□□□□ 0.17
GPCPD1-203ENST00000462080 MARVELD3Q96A59 401 aa16.02■□□□□ 0.16
GPCPD1-203ENST00000462080 TMEM92Q6UXU6 159 aa16.01■□□□□ 0.15
GPCPD1-203ENST00000462080 CDAN1Q8IWY9 1227 aa16■□□□□ 0.15
GPCPD1-203ENST00000462080 HOXB3P14651 431 aaPredicted RBP15.98■□□□□ 0.15
GPCPD1-203ENST00000462080 EMP3P54852 163 aa15.94■□□□□ 0.14
GPCPD1-203ENST00000462080 DOK7Q18PE1 504 aa15.94■□□□□ 0.14
GPCPD1-203ENST00000462080 HS6ST3Q8IZP7 471 aa15.94■□□□□ 0.14
GPCPD1-203ENST00000462080 ZNF710Q8N1W2 664 aa15.92■□□□□ 0.14
GPCPD1-203ENST00000462080 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms