RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 ZBTB47Q9UFB7 747 aaPredicted RBP9.36□□□□□ -0.91
SPARCL1-204ENST00000458304 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
SPARCL1-204ENST00000458304 TSPYL2Q9H2G4 693 aaPredicted RBP9.34□□□□□ -0.91
SPARCL1-204ENST00000458304 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
SPARCL1-204ENST00000458304 DAXXQ9UER7 740 aaPredicted RBP9.33□□□□□ -0.92
SPARCL1-204ENST00000458304 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
SPARCL1-204ENST00000458304 POTEIP0CG38 1075 aa9.29□□□□□ -0.92
SPARCL1-204ENST00000458304 IFNLR1Q8IU57 520 aaPredicted RBP9.27□□□□□ -0.93
SPARCL1-204ENST00000458304 KIF12Q96FN5 646 aa9.25□□□□□ -0.93
SPARCL1-204ENST00000458304 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
SPARCL1-204ENST00000458304 MS4A3Q96HJ5 214 aa9.24□□□□□ -0.93
SPARCL1-204ENST00000458304 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
SPARCL1-204ENST00000458304 FAM212AQ96EL1 285 aa9.22□□□□□ -0.93
SPARCL1-204ENST00000458304 MAP3K13O43283 966 aa9.2□□□□□ -0.94
SPARCL1-204ENST00000458304 BCANQ96GW7 911 aa9.2□□□□□ -0.94
SPARCL1-204ENST00000458304 DCBLD2Q96PD2 775 aa9.19□□□□□ -0.94
SPARCL1-204ENST00000458304 DCAF8Q5TAQ9 597 aa9.17□□□□□ -0.94
SPARCL1-204ENST00000458304 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
SPARCL1-204ENST00000458304 TAOK2Q9UL54 1235 aa9.16□□□□□ -0.94
SPARCL1-204ENST00000458304 SGIP1Q9BQI5 828 aa9.15□□□□□ -0.94
SPARCL1-204ENST00000458304 TRPC6Q9Y210 931 aa9.15□□□□□ -0.94
SPARCL1-204ENST00000458304 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
SPARCL1-204ENST00000458304 GSE1Q14687 1217 aa9.13□□□□□ -0.95
SPARCL1-204ENST00000458304 ASTLQ6HA08 431 aaPredicted RBP9.13□□□□□ -0.95
SPARCL1-204ENST00000458304 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
SPARCL1-204ENST00000458304 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
SPARCL1-204ENST00000458304 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
SPARCL1-204ENST00000458304 PYGBP11216 843 aa9.11□□□□□ -0.95
SPARCL1-204ENST00000458304 IFNL1Q8IU54 200 aa9.1□□□□□ -0.95
SPARCL1-204ENST00000458304 BMP2KQ9NSY1 1161 aaPredicted RBP9.09□□□□□ -0.95
SPARCL1-204ENST00000458304 TIE1P35590 1138 aa9.08□□□□□ -0.96
SPARCL1-204ENST00000458304 ARXQ96QS3 562 aa9.08□□□□□ -0.96
SPARCL1-204ENST00000458304 CHRM1P11229 460 aaPredicted RBP9.07□□□□□ -0.96
SPARCL1-204ENST00000458304 ATN1P54259 1190 aaPredicted RBP9.06□□□□□ -0.96
SPARCL1-204ENST00000458304 TTLL13PA6NNM8 815 aa9.04□□□□□ -0.96
SPARCL1-204ENST00000458304 CIZ1Q9ULV3 898 aaPredicted RBP9.04□□□□□ -0.96
SPARCL1-204ENST00000458304 LHX8Q68G74 356 aa9.03□□□□□ -0.96
SPARCL1-204ENST00000458304 PCDHB8Q9UN66 801 aa9.02□□□□□ -0.97
SPARCL1-204ENST00000458304 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
SPARCL1-204ENST00000458304 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
SPARCL1-204ENST00000458304 POTEB2H3BUK9 544 aa8.99□□□□□ -0.97
SPARCL1-204ENST00000458304 METRNQ9UJH8 293 aa8.99□□□□□ -0.97
SPARCL1-204ENST00000458304 C7P10643 843 aa8.98□□□□□ -0.97
SPARCL1-204ENST00000458304 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
SPARCL1-204ENST00000458304 ZNF467Q7Z7K2 595 aaPredicted RBP8.98□□□□□ -0.97
SPARCL1-204ENST00000458304 TMEM106CQ9BVX2 250 aa8.98□□□□□ -0.97
SPARCL1-204ENST00000458304 TRIM35Q9UPQ4 493 aa8.97□□□□□ -0.97
SPARCL1-204ENST00000458304 POTEFA5A3E0 1075 aa8.96□□□□□ -0.98
SPARCL1-204ENST00000458304 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
SPARCL1-204ENST00000458304 TIMELESSQ9UNS1 1208 aa8.96□□□□□ -0.98
SPARCL1-204ENST00000458304 IER5LQ5T953 404 aa8.92□□□□□ -0.98
SPARCL1-204ENST00000458304 PSEN1P49768 467 aa8.91□□□□□ -0.98
SPARCL1-204ENST00000458304 POTEJP0CG39 1038 aa8.9□□□□□ -0.98
SPARCL1-204ENST00000458304 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
SPARCL1-204ENST00000458304 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.98
SPARCL1-204ENST00000458304 COLQQ9Y215 455 aaPredicted RBP8.9□□□□□ -0.98
SPARCL1-204ENST00000458304 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
SPARCL1-204ENST00000458304 PDAP1Q13442 181 aaKnown RBP8.88□□□□□ -0.99
SPARCL1-204ENST00000458304 IRX5P78411 483 aaPredicted RBP8.87□□□□□ -0.99
SPARCL1-204ENST00000458304 OTUD5Q96G74 571 aa8.87□□□□□ -0.99
SPARCL1-204ENST00000458304 PKD2Q13563 968 aa8.86□□□□□ -0.99
SPARCL1-204ENST00000458304 SEC24BO95487 1268 aa8.84□□□□□ -0.99
SPARCL1-204ENST00000458304 RIOK3O14730 519 aaKnown RBP8.83□□□□□ -1
SPARCL1-204ENST00000458304 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
SPARCL1-204ENST00000458304 HOMEZQ8IX15 550 aa8.81□□□□□ -1
SPARCL1-204ENST00000458304 ECM2O94769 699 aaPredicted RBP8.8□□□□□ -1
SPARCL1-204ENST00000458304 PLCG2P16885 1265 aa8.8□□□□□ -1
SPARCL1-204ENST00000458304 OCEL1Q9H607 264 aa8.8□□□□□ -1
SPARCL1-204ENST00000458304 VGFO15240 615 aaPredicted RBP8.79□□□□□ -1
SPARCL1-204ENST00000458304 ILDR1Q86SU0 546 aaPredicted RBP8.79□□□□□ -1
SPARCL1-204ENST00000458304 CABP2Q9NPB3 220 aa8.79□□□□□ -1
SPARCL1-204ENST00000458304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.78□□□□□ -1
SPARCL1-204ENST00000458304 MKRN3Q13064 507 aaKnown RBP8.78□□□□□ -1
SPARCL1-204ENST00000458304 PDCD7Q8N8D1 485 aaKnown RBP8.78□□□□□ -1
SPARCL1-204ENST00000458304 ZFP91Q96JP5 570 aaPredicted RBP8.78□□□□□ -1
SPARCL1-204ENST00000458304 RGL2O15211 777 aa8.77□□□□□ -1.01
SPARCL1-204ENST00000458304 GOLGA2Q08379 1002 aa8.77□□□□□ -1.01
SPARCL1-204ENST00000458304 MAMSTRQ6ZN01 415 aa8.77□□□□□ -1.01
SPARCL1-204ENST00000458304 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
SPARCL1-204ENST00000458304 SCUBE2Q9NQ36 999 aa8.74□□□□□ -1.01
SPARCL1-204ENST00000458304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPARCL1-204ENST00000458304 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
SPARCL1-204ENST00000458304 DPY19L2Q6NUT2 758 aa8.69□□□□□ -1.02
SPARCL1-204ENST00000458304 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
SPARCL1-204ENST00000458304 DCAF8L2P0C7V8 631 aa8.67□□□□□ -1.02
SPARCL1-204ENST00000458304 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
SPARCL1-204ENST00000458304 SOX12O15370 315 aa8.66□□□□□ -1.02
SPARCL1-204ENST00000458304 L3MBTL3Q96JM7 780 aaPredicted RBP8.66□□□□□ -1.02
SPARCL1-204ENST00000458304 KDM2AQ9Y2K7 1162 aa8.66□□□□□ -1.02
SPARCL1-204ENST00000458304 STK25O00506 426 aa8.65□□□□□ -1.02
SPARCL1-204ENST00000458304 STK24Q9Y6E0 443 aa8.65□□□□□ -1.02
SPARCL1-204ENST00000458304 MS4A4AQ96JQ5 239 aa8.64□□□□□ -1.03
SPARCL1-204ENST00000458304 PHF8Q9UPP1 1060 aa8.64□□□□□ -1.03
SPARCL1-204ENST00000458304 SLAIN1Q8ND83 568 aa8.63□□□□□ -1.03
SPARCL1-204ENST00000458304 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
SPARCL1-204ENST00000458304 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.61□□□□□ -1.03
SPARCL1-204ENST00000458304 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
SPARCL1-204ENST00000458304 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
SPARCL1-204ENST00000458304 TMEM121BQ9BXQ6 578 aaPredicted RBP8.6□□□□□ -1.03
SPARCL1-204ENST00000458304 MFRPQ9BY79 579 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms