RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
LINC00161-202ENST00000455939 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
LINC00161-202ENST00000455939 GSE1Q14687 1217 aa13.45□□□□□ -0.26
LINC00161-202ENST00000455939 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
LINC00161-202ENST00000455939 PKD2Q13563 968 aa13.37□□□□□ -0.27
LINC00161-202ENST00000455939 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
LINC00161-202ENST00000455939 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
LINC00161-202ENST00000455939 PYGBP11216 843 aa13.31□□□□□ -0.28
LINC00161-202ENST00000455939 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
LINC00161-202ENST00000455939 POTEIP0CG38 1075 aa13.29□□□□□ -0.28
LINC00161-202ENST00000455939 CCDC61Q9Y6R9 512 aa13.29□□□□□ -0.28
LINC00161-202ENST00000455939 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
LINC00161-202ENST00000455939 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
LINC00161-202ENST00000455939 LHX8Q68G74 356 aa13.22□□□□□ -0.29
LINC00161-202ENST00000455939 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
LINC00161-202ENST00000455939 RGL2O15211 777 aa13.18□□□□□ -0.3
LINC00161-202ENST00000455939 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
LINC00161-202ENST00000455939 MAP3K13O43283 966 aa13.16□□□□□ -0.3
LINC00161-202ENST00000455939 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
LINC00161-202ENST00000455939 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
LINC00161-202ENST00000455939 CLCN6P51797 869 aa13.14□□□□□ -0.31
LINC00161-202ENST00000455939 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
LINC00161-202ENST00000455939 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
LINC00161-202ENST00000455939 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
LINC00161-202ENST00000455939 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
LINC00161-202ENST00000455939 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
LINC00161-202ENST00000455939 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
LINC00161-202ENST00000455939 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
LINC00161-202ENST00000455939 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
LINC00161-202ENST00000455939 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
LINC00161-202ENST00000455939 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
LINC00161-202ENST00000455939 VGFO15240 615 aaPredicted RBP13.03□□□□□ -0.32
LINC00161-202ENST00000455939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
LINC00161-202ENST00000455939 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
LINC00161-202ENST00000455939 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
LINC00161-202ENST00000455939 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
LINC00161-202ENST00000455939 PSEN1P49768 467 aa12.97□□□□□ -0.33
LINC00161-202ENST00000455939 STK25O00506 426 aa12.96□□□□□ -0.33
LINC00161-202ENST00000455939 TRPC6Q9Y210 931 aa12.96□□□□□ -0.33
LINC00161-202ENST00000455939 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
LINC00161-202ENST00000455939 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
LINC00161-202ENST00000455939 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
LINC00161-202ENST00000455939 TIE1P35590 1138 aa12.88□□□□□ -0.35
LINC00161-202ENST00000455939 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
LINC00161-202ENST00000455939 HS6ST3Q8IZP7 471 aa12.88□□□□□ -0.35
LINC00161-202ENST00000455939 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
LINC00161-202ENST00000455939 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
LINC00161-202ENST00000455939 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
LINC00161-202ENST00000455939 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
LINC00161-202ENST00000455939 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
LINC00161-202ENST00000455939 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
LINC00161-202ENST00000455939 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
LINC00161-202ENST00000455939 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
LINC00161-202ENST00000455939 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
LINC00161-202ENST00000455939 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.37
LINC00161-202ENST00000455939 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
LINC00161-202ENST00000455939 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
LINC00161-202ENST00000455939 MKRN3Q13064 507 aaKnown RBP12.75□□□□□ -0.37
LINC00161-202ENST00000455939 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
LINC00161-202ENST00000455939 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
LINC00161-202ENST00000455939 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
LINC00161-202ENST00000455939 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
LINC00161-202ENST00000455939 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
LINC00161-202ENST00000455939 METRNQ9UJH8 293 aa12.67□□□□□ -0.38
LINC00161-202ENST00000455939 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
LINC00161-202ENST00000455939 SOX12O15370 315 aa12.65□□□□□ -0.38
LINC00161-202ENST00000455939 C7P10643 843 aa12.64□□□□□ -0.39
LINC00161-202ENST00000455939 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
LINC00161-202ENST00000455939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00161-202ENST00000455939 PHF8Q9UPP1 1060 aa12.64□□□□□ -0.39
LINC00161-202ENST00000455939 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
LINC00161-202ENST00000455939 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
LINC00161-202ENST00000455939 NLRP6P59044 892 aa12.62□□□□□ -0.39
LINC00161-202ENST00000455939 IER5LQ5T953 404 aa12.62□□□□□ -0.39
LINC00161-202ENST00000455939 SEC24BO95487 1268 aa12.61□□□□□ -0.39
LINC00161-202ENST00000455939 RYDENQ9NUL5 291 aaKnown RBP12.6□□□□□ -0.39
LINC00161-202ENST00000455939 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
LINC00161-202ENST00000455939 PLCG2P16885 1265 aa12.58□□□□□ -0.4
LINC00161-202ENST00000455939 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
LINC00161-202ENST00000455939 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
LINC00161-202ENST00000455939 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
LINC00161-202ENST00000455939 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
LINC00161-202ENST00000455939 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
LINC00161-202ENST00000455939 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
LINC00161-202ENST00000455939 COLQQ9Y215 455 aaPredicted RBP12.52□□□□□ -0.41
LINC00161-202ENST00000455939 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
LINC00161-202ENST00000455939 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
LINC00161-202ENST00000455939 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
LINC00161-202ENST00000455939 PPP1R37O75864 691 aa12.47□□□□□ -0.41
LINC00161-202ENST00000455939 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
LINC00161-202ENST00000455939 G3V3G9 751 aa12.46□□□□□ -0.41
LINC00161-202ENST00000455939 POTEMA6NI47 508 aa12.43□□□□□ -0.42
LINC00161-202ENST00000455939 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
LINC00161-202ENST00000455939 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
LINC00161-202ENST00000455939 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
LINC00161-202ENST00000455939 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
LINC00161-202ENST00000455939 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
LINC00161-202ENST00000455939 LCE2DQ5TA82 110 aaPredicted RBP12.37□□□□□ -0.43
LINC00161-202ENST00000455939 SCUBE2Q9NQ36 999 aa12.37□□□□□ -0.43
LINC00161-202ENST00000455939 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms