RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 DCBLD2Q96PD2 775 aa9.45□□□□□ -0.9
HMGB1P15-201ENST00000453854 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
HMGB1P15-201ENST00000453854 PLEKHG5O94827 1062 aa9.43□□□□□ -0.9
HMGB1P15-201ENST00000453854 MS4A3Q96HJ5 214 aa9.42□□□□□ -0.9
HMGB1P15-201ENST00000453854 LHX8Q68G74 356 aa9.41□□□□□ -0.9
HMGB1P15-201ENST00000453854 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P15-201ENST00000453854 NUBP1P53384 320 aa9.4□□□□□ -0.9
HMGB1P15-201ENST00000453854 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
HMGB1P15-201ENST00000453854 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
HMGB1P15-201ENST00000453854 MAP3K13O43283 966 aa9.34□□□□□ -0.91
HMGB1P15-201ENST00000453854 TRPC6Q9Y210 931 aa9.34□□□□□ -0.91
HMGB1P15-201ENST00000453854 IFNLR1Q8IU57 520 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P15-201ENST00000453854 ZBTB47Q9UFB7 747 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P15-201ENST00000453854 ATMINO43313 823 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P15-201ENST00000453854 ASTLQ6HA08 431 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P15-201ENST00000453854 POTEB2H3BUK9 544 aa9.3□□□□□ -0.92
HMGB1P15-201ENST00000453854 ATN1P54259 1190 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P15-201ENST00000453854 BMP2KQ9NSY1 1161 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P15-201ENST00000453854 FAM212AQ96EL1 285 aa9.25□□□□□ -0.93
HMGB1P15-201ENST00000453854 IFNL1Q8IU54 200 aa9.22□□□□□ -0.93
HMGB1P15-201ENST00000453854 METRNQ9UJH8 293 aa9.22□□□□□ -0.93
HMGB1P15-201ENST00000453854 PCDHB13Q9Y5F0 798 aa9.22□□□□□ -0.93
HMGB1P15-201ENST00000453854 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
HMGB1P15-201ENST00000453854 POTEJP0CG39 1038 aa9.2□□□□□ -0.94
HMGB1P15-201ENST00000453854 PYGBP11216 843 aa9.2□□□□□ -0.94
HMGB1P15-201ENST00000453854 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
HMGB1P15-201ENST00000453854 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
HMGB1P15-201ENST00000453854 TTLL13PA6NNM8 815 aa9.19□□□□□ -0.94
HMGB1P15-201ENST00000453854 TIE1P35590 1138 aa9.19□□□□□ -0.94
HMGB1P15-201ENST00000453854 SLC39A7Q92504 469 aa9.19□□□□□ -0.94
HMGB1P15-201ENST00000453854 SGIP1Q9BQI5 828 aa9.19□□□□□ -0.94
HMGB1P15-201ENST00000453854 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
HMGB1P15-201ENST00000453854 C7P10643 843 aa9.18□□□□□ -0.94
HMGB1P15-201ENST00000453854 PKD2Q13563 968 aa9.18□□□□□ -0.94
HMGB1P15-201ENST00000453854 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
HMGB1P15-201ENST00000453854 PCDHB8Q9UN66 801 aa9.12□□□□□ -0.95
HMGB1P15-201ENST00000453854 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
HMGB1P15-201ENST00000453854 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P15-201ENST00000453854 TMEM106CQ9BVX2 250 aa9.11□□□□□ -0.95
HMGB1P15-201ENST00000453854 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
HMGB1P15-201ENST00000453854 GSE1Q14687 1217 aa9.09□□□□□ -0.95
HMGB1P15-201ENST00000453854 CHRM1P11229 460 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P15-201ENST00000453854 IER5LQ5T953 404 aa9.03□□□□□ -0.96
HMGB1P15-201ENST00000453854 CIZ1Q9ULV3 898 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P15-201ENST00000453854 SEC24BO95487 1268 aa9.02□□□□□ -0.97
HMGB1P15-201ENST00000453854 IRX5P78411 483 aaPredicted RBP9□□□□□ -0.97
HMGB1P15-201ENST00000453854 ECM2O94769 699 aaPredicted RBP8.99□□□□□ -0.97
HMGB1P15-201ENST00000453854 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
HMGB1P15-201ENST00000453854 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
HMGB1P15-201ENST00000453854 MAMSTRQ6ZN01 415 aa8.98□□□□□ -0.97
HMGB1P15-201ENST00000453854 SCUBE2Q9NQ36 999 aa8.96□□□□□ -0.98
HMGB1P15-201ENST00000453854 PSEN1P49768 467 aa8.95□□□□□ -0.98
HMGB1P15-201ENST00000453854 PLCG2P16885 1265 aa8.94□□□□□ -0.98
HMGB1P15-201ENST00000453854 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P15-201ENST00000453854 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P15-201ENST00000453854 OCEL1Q9H607 264 aa8.92□□□□□ -0.98
HMGB1P15-201ENST00000453854 RGL2O15211 777 aa8.91□□□□□ -0.98
HMGB1P15-201ENST00000453854 PDCD7Q8N8D1 485 aaKnown RBP8.91□□□□□ -0.98
HMGB1P15-201ENST00000453854 PDAP1Q13442 181 aaKnown RBP8.9□□□□□ -0.98
HMGB1P15-201ENST00000453854 HAP1P54257 671 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P15-201ENST00000453854 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P15-201ENST00000453854 TRIM41Q8WV44 630 aa8.87□□□□□ -0.99
HMGB1P15-201ENST00000453854 MKRN3Q13064 507 aaKnown RBP8.86□□□□□ -0.99
HMGB1P15-201ENST00000453854 POTEMA6NI47 508 aa8.85□□□□□ -0.99
HMGB1P15-201ENST00000453854 GOLGA2Q08379 1002 aa8.85□□□□□ -0.99
HMGB1P15-201ENST00000453854 ILDR1Q86SU0 546 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P15-201ENST00000453854 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P15-201ENST00000453854 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
HMGB1P15-201ENST00000453854 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P15-201ENST00000453854 POTEGQ6S5H5 508 aa8.84□□□□□ -0.99
HMGB1P15-201ENST00000453854 VSIG10Q8N0Z9 540 aa8.84□□□□□ -0.99
HMGB1P15-201ENST00000453854 SLAIN1Q8ND83 568 aa8.84□□□□□ -0.99
HMGB1P15-201ENST00000453854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
HMGB1P15-201ENST00000453854 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
HMGB1P15-201ENST00000453854 RIOK3O14730 519 aaKnown RBP8.79□□□□□ -1
HMGB1P15-201ENST00000453854 PAXIP1Q6ZW49 1069 aaPredicted RBP8.78□□□□□ -1
HMGB1P15-201ENST00000453854 EFCAB3Q8N7B9 438 aa8.78□□□□□ -1
HMGB1P15-201ENST00000453854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P15-201ENST00000453854 CHGAP10645 457 aaKnown RBP8.76□□□□□ -1.01
HMGB1P15-201ENST00000453854 ZFP91Q96JP5 570 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P15-201ENST00000453854 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
HMGB1P15-201ENST00000453854 SPRYD3Q8NCJ5 442 aa8.75□□□□□ -1.01
HMGB1P15-201ENST00000453854 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.75□□□□□ -1.01
HMGB1P15-201ENST00000453854 ST18O60284 1047 aa8.74□□□□□ -1.01
HMGB1P15-201ENST00000453854 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
HMGB1P15-201ENST00000453854 L3MBTL3Q96JM7 780 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P15-201ENST00000453854 CFAP44Q96MT7 982 aa8.74□□□□□ -1.01
HMGB1P15-201ENST00000453854 VGFO15240 615 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P15-201ENST00000453854 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
HMGB1P15-201ENST00000453854 C3orf67Q6ZVT6 689 aa8.71□□□□□ -1.02
HMGB1P15-201ENST00000453854 BCANQ96GW7 911 aa8.7□□□□□ -1.02
HMGB1P15-201ENST00000453854 MS4A4AQ96JQ5 239 aa8.7□□□□□ -1.02
HMGB1P15-201ENST00000453854 BOLA1Q9Y3E2 137 aa8.7□□□□□ -1.02
HMGB1P15-201ENST00000453854 PLSCR2Q9NRY7 297 aa8.68□□□□□ -1.02
HMGB1P15-201ENST00000453854 TMEM121BQ9BXQ6 578 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P15-201ENST00000453854 BCL11BQ9C0K0 894 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P15-201ENST00000453854 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
HMGB1P15-201ENST00000453854 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
HMGB1P15-201ENST00000453854 PHF8Q9UPP1 1060 aa8.67□□□□□ -1.02
HMGB1P15-201ENST00000453854 SOX12O15370 315 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms