RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
CSTF1-204ENST00000452950 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
CSTF1-204ENST00000452950 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
CSTF1-204ENST00000452950 CLCN6P51797 869 aa13.2□□□□□ -0.3
CSTF1-204ENST00000452950 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
CSTF1-204ENST00000452950 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
CSTF1-204ENST00000452950 PKD2Q13563 968 aa13.17□□□□□ -0.3
CSTF1-204ENST00000452950 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
CSTF1-204ENST00000452950 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
CSTF1-204ENST00000452950 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
CSTF1-204ENST00000452950 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
CSTF1-204ENST00000452950 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
CSTF1-204ENST00000452950 BBXQ8WY36 941 aaPredicted RBP13.09□□□□□ -0.31
CSTF1-204ENST00000452950 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
CSTF1-204ENST00000452950 DCBLD2Q96PD2 775 aa13.06□□□□□ -0.32
CSTF1-204ENST00000452950 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
CSTF1-204ENST00000452950 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
CSTF1-204ENST00000452950 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
CSTF1-204ENST00000452950 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
CSTF1-204ENST00000452950 CFAP44Q96MT7 982 aa13□□□□□ -0.33
CSTF1-204ENST00000452950 NUBP1P53384 320 aa12.97□□□□□ -0.33
CSTF1-204ENST00000452950 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
CSTF1-204ENST00000452950 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
CSTF1-204ENST00000452950 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
CSTF1-204ENST00000452950 LHX8Q68G74 356 aa12.9□□□□□ -0.34
CSTF1-204ENST00000452950 MAP3K13O43283 966 aa12.87□□□□□ -0.35
CSTF1-204ENST00000452950 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
CSTF1-204ENST00000452950 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
CSTF1-204ENST00000452950 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
CSTF1-204ENST00000452950 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
CSTF1-204ENST00000452950 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
CSTF1-204ENST00000452950 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
CSTF1-204ENST00000452950 TIMELESSQ9UNS1 1208 aa12.83□□□□□ -0.36
CSTF1-204ENST00000452950 DCAF8Q5TAQ9 597 aa12.81□□□□□ -0.36
CSTF1-204ENST00000452950 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
CSTF1-204ENST00000452950 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
CSTF1-204ENST00000452950 TULP1O00294 542 aaPredicted RBP12.79□□□□□ -0.36
CSTF1-204ENST00000452950 NBR1Q14596 966 aa12.79□□□□□ -0.36
CSTF1-204ENST00000452950 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
CSTF1-204ENST00000452950 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
CSTF1-204ENST00000452950 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
CSTF1-204ENST00000452950 RGL2O15211 777 aa12.74□□□□□ -0.37
CSTF1-204ENST00000452950 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
CSTF1-204ENST00000452950 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
CSTF1-204ENST00000452950 ARXQ96QS3 562 aa12.71□□□□□ -0.37
CSTF1-204ENST00000452950 PYGBP11216 843 aa12.7□□□□□ -0.38
CSTF1-204ENST00000452950 TIE1P35590 1138 aa12.7□□□□□ -0.38
CSTF1-204ENST00000452950 IFNL1Q8IU54 200 aa12.7□□□□□ -0.38
CSTF1-204ENST00000452950 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
CSTF1-204ENST00000452950 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
CSTF1-204ENST00000452950 SLC39A7Q92504 469 aa12.69□□□□□ -0.38
CSTF1-204ENST00000452950 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
CSTF1-204ENST00000452950 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
CSTF1-204ENST00000452950 C7P10643 843 aa12.68□□□□□ -0.38
CSTF1-204ENST00000452950 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
CSTF1-204ENST00000452950 GSE1Q14687 1217 aa12.67□□□□□ -0.38
CSTF1-204ENST00000452950 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
CSTF1-204ENST00000452950 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
CSTF1-204ENST00000452950 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
CSTF1-204ENST00000452950 PCDHB8Q9UN66 801 aa12.59□□□□□ -0.39
CSTF1-204ENST00000452950 TMEM106CQ9BVX2 250 aa12.58□□□□□ -0.4
CSTF1-204ENST00000452950 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
CSTF1-204ENST00000452950 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
CSTF1-204ENST00000452950 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
CSTF1-204ENST00000452950 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
CSTF1-204ENST00000452950 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
CSTF1-204ENST00000452950 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
CSTF1-204ENST00000452950 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-204ENST00000452950 SEC24BO95487 1268 aa12.5□□□□□ -0.41
CSTF1-204ENST00000452950 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
CSTF1-204ENST00000452950 IER5LQ5T953 404 aa12.49□□□□□ -0.41
CSTF1-204ENST00000452950 TMEM132AQ24JP5 1023 aa12.48□□□□□ -0.41
CSTF1-204ENST00000452950 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
CSTF1-204ENST00000452950 MAMSTRQ6ZN01 415 aa12.44□□□□□ -0.42
CSTF1-204ENST00000452950 HOMEZQ8IX15 550 aa12.42□□□□□ -0.42
CSTF1-204ENST00000452950 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
CSTF1-204ENST00000452950 PSEN1P49768 467 aa12.41□□□□□ -0.42
CSTF1-204ENST00000452950 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-204ENST00000452950 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
CSTF1-204ENST00000452950 PLCG2P16885 1265 aa12.37□□□□□ -0.43
CSTF1-204ENST00000452950 C14orf37Q86TY3 774 aa12.37□□□□□ -0.43
CSTF1-204ENST00000452950 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
CSTF1-204ENST00000452950 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
CSTF1-204ENST00000452950 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
CSTF1-204ENST00000452950 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
CSTF1-204ENST00000452950 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
CSTF1-204ENST00000452950 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
CSTF1-204ENST00000452950 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
CSTF1-204ENST00000452950 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
CSTF1-204ENST00000452950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
CSTF1-204ENST00000452950 PDCD7Q8N8D1 485 aaKnown RBP12.23□□□□□ -0.45
CSTF1-204ENST00000452950 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.45
CSTF1-204ENST00000452950 SLAIN1Q8ND83 568 aa12.19□□□□□ -0.46
CSTF1-204ENST00000452950 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
CSTF1-204ENST00000452950 ILDR1Q86SU0 546 aaPredicted RBP12.17□□□□□ -0.46
CSTF1-204ENST00000452950 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
CSTF1-204ENST00000452950 L3MBTL3Q96JM7 780 aaPredicted RBP12.15□□□□□ -0.46
CSTF1-204ENST00000452950 VGFO15240 615 aaPredicted RBP12.14□□□□□ -0.47
CSTF1-204ENST00000452950 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
CSTF1-204ENST00000452950 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms