RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-209ENST00000452660 TSPYL2Q9H2G4 693 aaPredicted RBP8.82□□□□□ -1
LRCH3-209ENST00000452660 KIF12Q96FN5 646 aa8.81□□□□□ -1
LRCH3-209ENST00000452660 MS4A3Q96HJ5 214 aa8.81□□□□□ -1
LRCH3-209ENST00000452660 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
LRCH3-209ENST00000452660 RASEFQ8IZ41 740 aa8.79□□□□□ -1
LRCH3-209ENST00000452660 C7P10643 843 aa8.77□□□□□ -1.01
LRCH3-209ENST00000452660 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
LRCH3-209ENST00000452660 ATMINO43313 823 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-209ENST00000452660 NUBP1P53384 320 aa8.76□□□□□ -1.01
LRCH3-209ENST00000452660 TIE1P35590 1138 aa8.75□□□□□ -1.01
LRCH3-209ENST00000452660 FAM212AQ96EL1 285 aa8.73□□□□□ -1.01
LRCH3-209ENST00000452660 PELP1Q8IZL8 1130 aaKnown RBP8.72□□□□□ -1.01
LRCH3-209ENST00000452660 MAP3K13O43283 966 aa8.71□□□□□ -1.02
LRCH3-209ENST00000452660 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
LRCH3-209ENST00000452660 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
LRCH3-209ENST00000452660 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
LRCH3-209ENST00000452660 MAMSTRQ6ZN01 415 aa8.67□□□□□ -1.02
LRCH3-209ENST00000452660 POTEB2H3BUK9 544 aa8.65□□□□□ -1.02
LRCH3-209ENST00000452660 VASPP50552 380 aaPredicted RBP8.65□□□□□ -1.02
LRCH3-209ENST00000452660 OTUD5Q96G74 571 aa8.65□□□□□ -1.02
LRCH3-209ENST00000452660 PCDHB13Q9Y5F0 798 aa8.65□□□□□ -1.02
LRCH3-209ENST00000452660 IER5LQ5T953 404 aa8.64□□□□□ -1.03
LRCH3-209ENST00000452660 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
LRCH3-209ENST00000452660 GSE1Q14687 1217 aa8.61□□□□□ -1.03
LRCH3-209ENST00000452660 TRPC6Q9Y210 931 aa8.6□□□□□ -1.03
LRCH3-209ENST00000452660 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
LRCH3-209ENST00000452660 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
LRCH3-209ENST00000452660 CHRM1P11229 460 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-209ENST00000452660 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
LRCH3-209ENST00000452660 POTEFA5A3E0 1075 aa8.55□□□□□ -1.04
LRCH3-209ENST00000452660 KLHL34Q8N239 644 aa8.55□□□□□ -1.04
LRCH3-209ENST00000452660 TRIM35Q9UPQ4 493 aa8.55□□□□□ -1.04
LRCH3-209ENST00000452660 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
LRCH3-209ENST00000452660 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-209ENST00000452660 SEC24BO95487 1268 aa8.52□□□□□ -1.05
LRCH3-209ENST00000452660 TMEM106CQ9BVX2 250 aa8.52□□□□□ -1.05
LRCH3-209ENST00000452660 PYGBP11216 843 aa8.5□□□□□ -1.05
LRCH3-209ENST00000452660 SPOCK2Q92563 424 aa8.49□□□□□ -1.05
LRCH3-209ENST00000452660 COLQQ9Y215 455 aaPredicted RBP8.49□□□□□ -1.05
LRCH3-209ENST00000452660 IRX5P78411 483 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-209ENST00000452660 PLCG2P16885 1265 aa8.45□□□□□ -1.06
LRCH3-209ENST00000452660 IFNLR1Q8IU57 520 aaPredicted RBP8.45□□□□□ -1.06
LRCH3-209ENST00000452660 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
LRCH3-209ENST00000452660 PCDH10Q9P2E7 1040 aa8.45□□□□□ -1.06
LRCH3-209ENST00000452660 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
LRCH3-209ENST00000452660 PCDHB8Q9UN66 801 aa8.44□□□□□ -1.06
LRCH3-209ENST00000452660 POTEMA6NI47 508 aa8.39□□□□□ -1.07
LRCH3-209ENST00000452660 PDAP1Q13442 181 aaKnown RBP8.39□□□□□ -1.07
LRCH3-209ENST00000452660 POTEGQ6S5H5 508 aa8.38□□□□□ -1.07
LRCH3-209ENST00000452660 PSEN1P49768 467 aa8.37□□□□□ -1.07
LRCH3-209ENST00000452660 GOLGA2Q08379 1002 aa8.37□□□□□ -1.07
LRCH3-209ENST00000452660 MKRN3Q13064 507 aaKnown RBP8.36□□□□□ -1.07
LRCH3-209ENST00000452660 ILDR1Q86SU0 546 aaPredicted RBP8.36□□□□□ -1.07
LRCH3-209ENST00000452660 CIZ1Q9ULV3 898 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-209ENST00000452660 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-209ENST00000452660 PDCD7Q8N8D1 485 aaKnown RBP8.34□□□□□ -1.07
LRCH3-209ENST00000452660 L3MBTL3Q96JM7 780 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-209ENST00000452660 SLAIN1Q8ND83 568 aa8.33□□□□□ -1.08
LRCH3-209ENST00000452660 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.32□□□□□ -1.08
LRCH3-209ENST00000452660 SNPHO15079 494 aa8.31□□□□□ -1.08
LRCH3-209ENST00000452660 FAM163AQ96GL9 167 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-209ENST00000452660 TMEM121BQ9BXQ6 578 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-209ENST00000452660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.28□□□□□ -1.082e-11■■□□□ 11.6
LRCH3-209ENST00000452660 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
LRCH3-209ENST00000452660 CABP2Q9NPB3 220 aa8.23□□□□□ -1.09
LRCH3-209ENST00000452660 ST18O60284 1047 aa8.22□□□□□ -1.09
LRCH3-209ENST00000452660 TAOK2Q9UL54 1235 aa8.22□□□□□ -1.09
LRCH3-209ENST00000452660 RIOK3O14730 519 aaKnown RBP8.21□□□□□ -1.1
LRCH3-209ENST00000452660 VGFO15240 615 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-209ENST00000452660 PLSCR2Q9NRY7 297 aa8.21□□□□□ -1.1
LRCH3-209ENST00000452660 G3V3G9 751 aa8.19□□□□□ -1.1
LRCH3-209ENST00000452660 SOX12O15370 315 aa8.19□□□□□ -1.1
LRCH3-209ENST00000452660 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
LRCH3-209ENST00000452660 RNF25Q96BH1 459 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-209ENST00000452660 CDAN1Q8IWY9 1227 aa8.14□□□□□ -1.11
LRCH3-209ENST00000452660 EFCAB3Q8N7B9 438 aa8.14□□□□□ -1.11
LRCH3-209ENST00000452660 DPY19L2Q6NUT2 758 aa8.13□□□□□ -1.11
LRCH3-209ENST00000452660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-209ENST00000452660 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-209ENST00000452660 NLRP6P59044 892 aa8.07□□□□□ -1.12
LRCH3-209ENST00000452660 DOK7Q18PE1 504 aa8.07□□□□□ -1.12
LRCH3-209ENST00000452660 MICALL2Q8IY33 904 aa8.06□□□□□ -1.12
LRCH3-209ENST00000452660 ZSWIM6Q9HCJ5 1215 aa8.05□□□□□ -1.12
LRCH3-209ENST00000452660 ECM2O94769 699 aaPredicted RBP8.04□□□□□ -1.12
LRCH3-209ENST00000452660 HOXB3P14651 431 aaPredicted RBP8.04□□□□□ -1.12
LRCH3-209ENST00000452660 EMP3P54852 163 aa8.04□□□□□ -1.12
LRCH3-209ENST00000452660 MS4A4AQ96JQ5 239 aa8.04□□□□□ -1.12
LRCH3-209ENST00000452660 RIMBP2O15034 1052 aa8.03□□□□□ -1.12
LRCH3-209ENST00000452660 HOXB1P14653 301 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-209ENST00000452660 BCL11BQ9C0K0 894 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-209ENST00000452660 FBXO22Q8NEZ5 403 aa8.02□□□□□ -1.13
LRCH3-209ENST00000452660 MARVELD3Q96A59 401 aa8.02□□□□□ -1.13
LRCH3-209ENST00000452660 PHF8Q9UPP1 1060 aa8.02□□□□□ -1.13
LRCH3-209ENST00000452660 PKD2Q13563 968 aa8□□□□□ -1.13
LRCH3-209ENST00000452660 ZNF710Q8N1W2 664 aa8□□□□□ -1.13
LRCH3-209ENST00000452660 STK24Q9Y6E0 443 aa7.99□□□□□ -1.13
LRCH3-209ENST00000452660 STK25O00506 426 aa7.98□□□□□ -1.13
LRCH3-209ENST00000452660 HS3ST6Q96QI5 342 aa7.98□□□□□ -1.13
LRCH3-209ENST00000452660 TMEM92Q6UXU6 159 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms